Caballeronia sp. SBC2: SBC2_83730
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Entry
SBC2_83730 CDS
T06459
Symbol
hupB_4
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caba03032
]
SBC2_83730 (hupB_4)
03036 Chromosome and associated proteins [BR:
caba03036
]
SBC2_83730 (hupB_4)
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_83730 (hupB_4)
DNA replication proteins [BR:
caba03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SBC2_83730 (hupB_4)
Chromosome and associated proteins [BR:
caba03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SBC2_83730 (hupB_4)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SBC2_83730 (hupB_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
DUF2267
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QIE30297
LinkDB
All DBs
Position
pSBC2-5:132175..132450
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AA seq
91 aa
AA seq
DB search
MNKQELTDAVATEMRITKAAAAETIDAFLDTVTNAVVKGDQVQLIGFGSFSTGARAARAG
RNPKTGEALQIAASKTVKFTAGKAFKDAVNQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggaactcaccgatgcagtggcaaccgaaatgcgcatcaccaaagcggca
gcagccgaaaccatcgacgcatttcttgatactgtgacgaacgcggtggtcaagggcgac
caagttcaactgatcgggttcggatctttcagcacgggcgcgcgtgcggcccgtgcgggt
cgcaacccgaagaccggcgaagcactccagatcgccgcgtcaaagaccgtcaagtttacg
gccggcaaagcgttcaaggacgcagtgaaccagtag
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