Chelonoidis abingdonii (Abingdon island giant tortoise): 116814602
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Entry
116814602 CDS
T07367
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116814602
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cabi01009
]
116814602
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116814602
Protein phosphatases and associated proteins [BR:
cabi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116814602
Cell adhesion molecules [BR:
cabi04515
]
Cadherins
Protocadherins
116814602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Fibulin_C
K319L-like_PKD
TMEM154
Y_Y_Y
DUF6249
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
116814602
NCBI-ProteinID:
XP_032618234
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MDLLSGTYLLAVLLTCIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVSLSSP
LQFKLVYKTGDVPLIRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GTPPRSSTAILQVTVTDVNDNRPVFKENDIEVSIPENAPVGTSVSQLHATDADLGSNAQI
HFFFSNQISSLAKRLFALDNTTGLITIKEPLDREESPVHKLTVLASDGSSIPSRATVTVN
ITDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPVIGLSIPENNAPGTQLTKISATDADSGRNAEISYMLGSDAPPIFNLDRRTGVLTV
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTLSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRENFIIDPLTGVIRPNITFDREQQGSYTFQVK
AIDGGRVQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELIPTATNPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRSLFTIDQLTGNITLKEKVITADHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETITNGSYVQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKSKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPAHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEMGRPQSPLKETSLESWTQPQSQRRVTFHLPDGSQESCSDSGLGDHEPSSSA
STSHPLPLGFPQEEYYEQASPNSRTEGDGNSDPESTTEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNPPLPSFGFQQGWGRGTIPEGRHALGRPMPKDDTDKSQGGPRP
QFYNTCERHCTTEDPVKVIPLANFAPSQQAAVSGSNTFIHEHQL
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattaacctgcattgtatttcag
tccggtgcccaagagaagaattatactgtgagggaagaactgccagaaaatgtcctgatt
ggcaatttgcttaaggatctgaacttgacactggacccggatgtgtccctttcatcacct
cttcagttcaagcttgtgtataagactggggatgtgccattaatccgagtggaggaaaac
actggtgagatattcactactgccaaccgcatagaccgggagaagttgtgctctggcatt
tttagtgagaaccgctgcttttatgaggtggaggtagcagttttgcctgatgaagtcttc
agactggtcaagatcagattcctgatagaggatatcaatgacaatgctccccttttcccc
tcaacagttattaacatctccattcctgagaacacagccattaattcccgctattctgtc
ccttctgccatcgatcctgacattggagtgaatggcattcagcattatgaacttcttaag
cccaaaacagcaccgaaaaggacatttggatccattacaaatgatcagggtcaaaatgta
tttggacttgatataattgaaacacctgagggagacaagtggccacagttgatagtccag
cagatcctggacagggagcagaaagacacatatgtgatgaagattaaagttgaagatggt
ggaacacctcccagatccagtacagccatcctacaagtaacagttactgatgtgaatgac
aatcgcccagtctttaaggaaaatgacattgaagttagtattccagaaaatgctccagtg
ggcacctcagtttctcagctccatgccactgatgctgatctgggctcaaatgcgcagatc
cacttctttttcagcaatcagatctccagtctggccaaaaggctctttgccttagataac
accactggcctcatcacaattaaggaaccactggacagggaggagtcacctgtacataag
ttaactgttttggcaagtgatggcagctcaattccatcaagagcaacagtgacagtaaat
atcaccgatattaacgataatgtcccatccatagacacaagatacatcatcaatccagtg
aatgggactgtgctcctgtctgagaaagcgccactcaatacaaaaattgccctgattaca
gtaatggacaaggatgctgatctgaatggaaaagttacctgcttcacagaccatgatgtc
ccttttaggttaaagccagtatttgataatcagtttctgttggagactgccacatttcta
gactatgaggctacgcgagaatatgccattaaaatagtggcctctgattcagggaaacct
cccttgaatcagtctgcaatgctgctgatcaaaatcaaagatgagaatgacaatgcccca
gtttttacacagcctgtcataggactttccatacctgagaacaatgctcctgggacccaa
ctgaccaagatcagtgccacagatgcagacagtggacgcaatgctgagatcagctatatg
ctgggttcagatgcaccccccattttcaacctggatcgccgcacaggagttctgacagta
gtgagaaagttggacagggaaaagcaggacaggtactccttcactgtactggctaaggat
aatgggatgccaccattgcagaccaatgctactgtgacactatcagttctggaccagaat
gacaacagccctgcttttacccataatgaatacaatttctatgtgccagaaaacctcccc
atgtatggcacagtggggcttatcacagttactgacgctgactctggagagaatgctgca
gttactctctctatattaaatggcagagagaatttcattatcgatccacttactggtgta
ataagacccaatattacatttgatagagagcaacaaggttcttacactttccaggtgaag
gctatcgatggaggaagagtgcaacgctcttccactgccaaagtgaccataaatgtagtt
gatgtgaatgacaacaggccggttttcgtcatcccttcatccaactactcctatgagttg
attcccacagccaccaatccaggatccgtggtgactaaagtctttgcagttgacaatgat
acagggatgaatgcagagctccgctacagcattataggtgggaattcaagaagtttgttt
acaattgatcagttaacaggcaacattactttgaaagagaaggtaatcacagcagatcat
ggcttacacaggctggtgataaaagtcaatgatttaggacagccagagtctctctatacc
atagcactggtgcatttatttgtaaatgagaccatcaccaatggttcatatgtgcaggag
ctggtgcgcagaaatatggaaacaccagtgggccagaatgttggggatggtgagataacc
ccacagaccaatgactatgtcaaaatcatcattgccataattgcaggcaccatgacagtc
atcctggtcatttttgtcactgctctggtacgatgccgtcagacaccccggcacaaggtt
gtccaaaaaagcaagcagagtggggaatgggtctccccgaaccaggagaaccgacagatc
aagaagaagaagaagaaaaagaagcgctctcctaaaagcctccttctcaactttgtgaca
attgaagaatctaagcccgatgatcctgcccatgagcatataaatggcactttagacatt
cccgtagagctagaagaacaaactatgggaaaatataactgggccaccacaccaaccaca
tttaagcctgacagcccagatttagcaaagcattacaagtctgcctctccacaacccacc
tttcaaattaaacccgagactcctgtgccccctaagaagcaccatgtcattcaggaactg
cctctggataacacctttgtggtgggttgtgactcactctccaagtgctcctcaagcagc
tcggacccatatagtgtctccgaatgcagctgtcaaggtggcttcaagaccccaggcccc
atccacaccagacagcacacaaaagagatgggaagaccccagagccctttgaaagagaca
agcctggaatcatggactcagccccagtcgcaacgccgtgtcacttttcacctaccagac
ggctcccaggaaagctgcagtgacagtgggcttggagaccatgaacccagcagcagtgct
agcacatcgcatcctctgccccttggtttcccccaagaggagtactatgaacaggcttca
cccaacagtcggacagaaggagatggcaattcggacccagagtccactactgaagttaat
ctccaaaaagcccttgctgaagcttccgagacctgcacacaagaatgtcttatcctaggc
cattctgacaactgctggatgccaccttctttgacacagtaccaacaatccaaccctcct
ttgccatcatttggcttccagcaaggatggggtcgaggaaccatacccgagggaagacac
gcgcttgggaggcccatgccgaaggatgatactgacaaaagccaaggtggtccacggccc
cagttctacaacacctgtgaaagacattgcaccactgaagatccagtcaaggtgataccc
ctggcaaacttcgctccatctcaacaggcagcagtgtctgggagtaatacctttatacat
gagcaccagctataa
DBGET
integrated database retrieval system
