Chelonoidis abingdonii (Abingdon island giant tortoise): 116814677
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Entry
116814677 CDS
T07367
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin
KO
K06548
sialoadhesin
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116814677 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cabi04090
]
116814677 (SIGLEC1)
04091 Lectins [BR:
cabi04091
]
116814677 (SIGLEC1)
CD molecules [BR:
cabi04090
]
Proteins
116814677 (SIGLEC1)
Lectins [BR:
cabi04091
]
I-type lectins (Siglecs)
116814677 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_4
Ig_5
Izumo-Ig
Ig_CD22
C1-set
C2-set_2
PKD
Motif
Other DBs
NCBI-GeneID:
116814677
NCBI-ProteinID:
XP_032618339
Ensembl:
ENSCABG00000005224
LinkDB
All DBs
Position
Unknown
AA seq
1693 aa
AA seq
DB search
MPILFQLIFLASHAQQAFGSWGVTYPLSLHSIKDSCILIPCTFSYPSTVTSTGIVAIWYK
DYDNERIVIYHSATPSEVDGRFQGRTELLGNLASHNCTLLLRGVRSEDSGKYNFRFEINQ
GDRWSDLRGVMVTVTDAPTSPTIAAPEDLREGMRVNFTCSSPYACPYDSTTLQWRGYNAL
LSTVTGTVQLDTTGVLSQQTLYSILSWQDHSKILFCEVSVGSKQATGEIALRVKYSPKGI
KVVINPSTKNIRVGDAVSLMCSVNSTFPEVTTYKWYKGGTALGESQQILILQSVAREDYG
LYHCEAENSVGTGVAEAVVLYVFSAVLSVSPSAEIQEGEMVTLTCAVPGEENQDLSYTWY
KNNVWIKEGTARSLVFHEVTSSDTGYYFCKVQNDKGSETSQAISLSVFYPPRGLAITLFQ
ETQEGKLALIHCTVDSHPQSVLALYRNEALIATTNSHAAPSQRLSITASRNSLKLEIQNV
LPEDDGRYRCTASNAYGNATAAKLFHAQMARVLISPSPEVREGDAVTLTCVATRSAEEGT
SYTWYKNARWLKDSSENTLVLPAVSSRDASAFQCKAQNKRGSSTSPAVTLRVLFPPRRPQ
MTSLLETQNRHLGIILCTTDSDPQSELALYRGDELVASTSGSRSAGQKLSATPSYNSLKV
EIREVVLEDEGTYVCSARNAYGNASTSMVFSAETARMIATPAPEVQEGQGVNLTCHVSSN
SSAMTKYSWYRNGQWLSEGLANSLVFQRVASTDAGVYYCKATNNGTSRSSALVSLNVLYA
PRNPRMTSFLEAEMGRLAIIQCMVDSNPPAQLSLYKGGKLVAFTGSRTAAAQRIGITASP
NSLRVEIRDITLEDEGNYRFTASNAYGTSSGLLYFRVQTARVLITPSTDVQEGDDVSLTC
DVTGNAPEDATYTWYKNSHRLQESSDSFLAFPHITSGDTGSYHCKAHNPEGTSSSISPAV
SLHVSYPPREPQLTSFLETPDGQLGVLQCTVDSDPQSELSLFRGGELVASTTGSHPAARQ
RVSVSSSHNSLKVEIQAVVMEDEGEYVCSASNAYGNATTSLNFTAETARVWISPSPDVHE
GDAVNLTCAVDSDAPGMPHYIWYKNNIWFSEGPGRSLVFPKVTTADAASYHCTVKTQERV
RSSSPGTLNVLYPPRNLWVKSFLDTQDGKLAIILCAVDSNPQSELALRRADELVASGSSR
GDGASGQRLRISSSPNTLKLEIRSVTLEDEGMYVCSANNVIGEASTSIYFTIETVRVVIQ
PGPDVREGEHITLTCEDASTQPSTIYTWYKNTKWLAEGPGSSLTIRGVAGTDAGSYSCTA
HNDRGRRTSLPTALRVLYAPRKPSLSSFLDAQDGRQAIIQCTVDSHPPSDIALYRGAERT
PVASTQGSQGSSSQRLGIHMSHNSLKVEMKDVVLEDAGQYICSANNTYGSATASVRFDVE
TVRIMIEPSQEIHEGVTVNVTCLVADWLGGETNYTWYKNSKWLQDGPVRSLHLDRVSSTD
TGSYHCRAEGRRGSAISALVSLDVLYTPRNPSMNTFLENRNARVGLIRCTADSNPRAELA
LYREDKLVASSQGPRSAASQRVSVFPSYNTLRVEIWDVTSADSAEYMCVASNALGNVTAT
SYFSTQTLTDLRLYKILARMFIAALGAIVLAVAVVLLWPRITKLLKPLRDESSMELTGTR
DQSQVDDTSLTNS
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcttatttcagcttatcttcctggccagtcatgcccagcaagcctttggctcg
tggggcgtcacctaccccctaagcctgcacagtataaaggactcctgcatcctgataccc
tgcaccttcagctaccccagcacagtgacctccacgggcattgtggccatctggtacaag
gattacgataacgagcgcattgtgatttaccactcggccactcccagcgaggtcgatggc
aggttccagggccggaccgagctgctgggcaacctggccagccacaactgcaccctgctg
ctgaggggcgtgaggagcgaggacagtggcaagtacaacttcaggttcgagatcaaccag
ggtgaccggtggtcagacctgcgtggagtgatggtgacggttaccgatgcccccaccagc
ccaaccattgctgccccggaagatctaagggagggtatgagagtgaacttcacctgctcc
agtccatatgcctgcccatacgatagcaccactctgcagtggagaggctacaatgccctg
ctctcgactgtgactgggacagtgcaactggacaccactggagtgctcagccagcagacc
ctctacagcatcttgtcatggcaggaccactccaaaattctgttttgcgaagtgtctgtt
ggctccaagcaggcaaccggggaaattgctctgagggtgaaatattccccaaaaggcata
aaagtggtaatcaacccctccacaaagaacatccgggtgggcgacgctgtgtctctcatg
tgcagtgtgaacagcaccttccccgaggtcaccacctacaagtggtacaagggcgggact
gccctgggggagagccaacagattctgattctccagagcgttgctcgcgaagattatggc
ctgtaccactgtgaagcggaaaattccgtcggcaccggggtggcggaagcagttgttctc
tatgttttttctgccgtgctctcggtgagcccttctgcagagatacaggaaggcgagatg
gtcactttgacgtgcgccgttcccggcgaggagaaccaggatctcagctacacctggtac
aagaacaacgtctggatcaaggaaggcacggcccgctccctggtgtttcacgaagtcacc
agcagcgacactggctattatttctgcaaggtgcagaacgacaaagggagtgagacgtct
caggccatcagcctgagcgtgttctatccccctaggggccttgccatcaccttgttccaa
gagacgcaggaaggaaaactggctctcattcactgcaccgtggatagccacccccagtct
gtgctggccctttaccgcaacgaggccctcattgccaccaccaactcccatgcggccccc
agccagcggctcagcatcacagcttcccgcaactccttgaaactagagatccagaacgtg
ctgccggaggacgacggccgataccggtgcacggcaagcaatgcatacgggaacgcgact
gctgctaagctgttccatgcccaaatggcgagagtgttgatcagtccctccccggaggtg
cgcgaaggagatgcagtcaccctgacgtgcgttgcaacccgaagcgcagaggaagggacc
agctacacctggtataagaacgccaggtggctgaaggacagctcagagaacaccctggtc
ctcccagctgtgagcagcagggacgccagcgctttccagtgtaaggcccagaataagaga
ggcagcagcacctctccggctgtcactctgcgggtgctgttcccaccgagacggccccag
atgacctccctgctagagacgcagaacaggcacctgggcatcatcctgtgcaccaccgac
agcgacccacagtccgaattagccctgtacagaggagatgaattagtagcttccaccagt
ggctcccgctcagccggccagaagctcagtgcgacgccatcgtacaacagcctgaaggtg
gaaatccgcgaggtggtgctggaggacgaagggacctatgtgtgctcggctaggaacgcc
tatggcaatgcaagcacctccatggtcttcagtgcagagacggcgaggatgattgccacg
ccggccccagaggtgcaggaaggccagggggtcaacctgacctgccacgtgagcagcaac
tcatcggctatgactaagtacagctggtacagaaatggccagtggctgtccgagggcctg
gccaattccctggtgttccagcgggtggccagtacagatgccggggtctattactgcaag
gcaacgaataacggaacaagcagaagctccgccttggtctcgctgaatgtgctgtatgcc
cccaggaatccccgaatgacctcgttcctggaggcggagatgggcagactggccatcatc
cagtgcatggtggacagcaaccccccggcccagctgtccctgtataaaggaggcaaactc
gtggccttcaccggctccaggactgcagctgcccaacggatcggcatcactgcctccccg
aactccctcagggtggagatccgggacatcacgctggaggacgaagggaactatcgcttc
accgctagcaatgcctacggcacatcttctgggctcctgtacttccgtgtgcaaacggcc
agagttctaattacgccctccacggacgtgcaggaaggggatgatgtctccctgacatgt
gatgtgacaggaaatgctccagaggacgccacctacacctggtacaaaaacagccaccgg
cttcaagagagctcagacagcttcctcgcctttccacacataaccagtggggatactggc
tcttaccactgcaaagctcacaaccccgagggaaccagcagcagcatctccccagccgtg
agcttacacgtctcttatccgccccgggagccccagctgacctccttcctggagacaccg
gatgggcagctgggcgttctccagtgcactgttgatagtgacccacagtcagagttatct
ctgttcagaggaggcgaacttgtggcttccaccactggctcccaccctgcagccagacag
cgagtcagtgtctcctcatcacacaacagcttgaaggtggagattcaggctgtggtgatg
gaggatgaaggagagtatgtgtgttctgctagtaacgcgtatggcaatgcaaccacctca
ctgaacttcactgcagagactgcaagggtctggatctctccttcgccggatgtccacgag
ggggatgctgttaacctgacctgtgcagttgacagtgatgcccctgggatgccgcactac
atctggtataagaacaacatatggttcagtgagggccctggcaggtcactcgtgtttccc
aaggtcaccaccgctgatgctgcatcctaccactgcacggtgaagacccaggagagggtt
agaagctcttccccaggcactttgaacgtcctctatcctcccaggaatctctgggtgaag
tccttcctggatactcaggatgggaagctagccatcatcctctgtgctgttgacagtaac
ccgcagtcagaactggccctgcgcagagctgatgagctggttgcttctggttcctcccga
ggtgacggggcatctggacagcggttacgcatctcatcctctcctaacaccttgaaactg
gagatcaggagcgtcaccttggaggatgaagggatgtacgtgtgctctgcaaacaatgtg
atcggcgaagccagcacctctatatatttcaccatcgagactgtgagagttgtgatccaa
ccgggtcccgatgtacgtgagggggagcacatcacactgacctgtgaggatgccagcacc
cagccgagcaccatttacacctggtacaagaacaccaaatggctggcagagggccctggc
agttccctcacgatccgtggtgtggcgggcactgatgctggctcgtactcctgcacggct
cacaatgacaggggaagaagaacatctctgcccaccgccttgcgcgtgctctacgcccca
aggaagccctcactcagctccttcctagatgcccaggatgggcgccaggccatcatccaa
tgcactgtcgacagccacccaccgtcagatatagccttgtacagaggggctgagcgcacg
cccgtggcttccacccagggttctcagggctcatccagccagcgtctgggcattcacatg
tcccataactccctgaaggtggagatgaaggacgtcgtgctggaggatgcaggccagtac
atctgctcagctaacaacacctacggcagtgccacagcatccgtgcgcttcgatgtggag
actgtcagaatcatgattgaaccatctcaggaaatacatgaaggagtcacagtcaacgtg
acctgcctggttgccgattggctcgggggcgagaccaactacacctggtataagaacagc
aagtggctgcaggacggtcctgttaggtcgctccaccttgatagggtctccagcaccgat
acggggtcataccactgtcgggcagaggggaggagaggaagtgccatctctgccctggtc
agcttggatgtgctctatactccaaggaacccatcgatgaacaccttcctggagaaccgc
aatgcaagggtgggcctcatccgatgcacagctgatagcaacccacgggctgaattagcc
ctgtacagagaggataaactagtggcttccagccaaggtccacgctcagcagccagccag
agggtcagtgtgtttccatcctacaacaccttgagagtggagatctgggatgtcacatca
gcggattcagcagaatacatgtgcgtggccagcaatgcactgggaaatgtgacagccacc
tcctacttcagtacgcaaactctcactgacctgcgcttgtacaagatcctggccaggatg
ttcatcgcagctctgggggctattgttctggccgttgcagtggtcctgttgtggcccagg
ataacgaagctgctgaagccgctaagagatgaaagttccatggaactgactggcacaagg
gaccaatcgcaggttgacgacacgtccttgaccaacagctaa
DBGET
integrated database retrieval system
