Chelonoidis abingdonii (Abingdon island giant tortoise): 116814827
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Entry
116814827 CDS
T07367
Symbol
SOX8
Name
(RefSeq) transcription factor SOX-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116814827 (SOX8)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116814827 (SOX8)
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GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116814827
NCBI-ProteinID:
XP_032618633
UniProt:
A0A8C0J9A0
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All DBs
Position
9:4817912..4824149
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AA seq
468 aa
AA seq
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MLTMTEEHDKALEPPCSPAGTASSMSHMDSDSDSPLSPAGSEGLGCAPPAAAPRPPAGPK
GEPAEVDERFPACIRDAVSQVLKGYDWSLVPMPVRGNGSLKAKPHVKRPMNAFMVWAQAA
RRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKYQPRRR
KSVKAGQSDSDSGAELSQHAGSQIYKADTGLGAVGDSHHHSDHTGQTHGPPTPPTTPKTD
LHHGSKQELKHEGRRLVESGRQNIDFSNVDISELSSEVINMETFDVRELDQYLPLNGHSA
MPADHGQNSSAGSYGPSYSHPANGTTGAAQVWTHKSPSSVSPTLNETSQQRPHIKTEQLS
PSHYSDQSHGSPTHSDYGSYSAQSCATTASATTAAASFSSSQCDYTDLQSSNYYNPYSGY
PSSIYQYPYFHSSRRPYATPILNGLSIPPAHSPTANWDQPVYTTLTRP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccatgaccgaggagcacgacaaagccctggagccgccctgcagcccggcgggc
accgccagctccatgtcccacatggactcggactccgactcgccgctgtcccccgccggc
tcggaggggctgggctgcgccccgccggccgccgccccgcgcccgcccgccggccccaag
ggggagccggccgaggtggacgagcgcttccccgcctgcatccgggacgccgtgtcgcag
gtgctgaaggggtacgactggagtctggtgcccatgcccgtgcggggcaatggatcgctc
aaggccaagccccacgtcaagcggcccatgaacgccttcatggtgtgggcgcaggccgcc
cgcaggaagctggccgaccagtacccgcatctgcacaacgccgagctcagcaagaccctg
ggcaagctctggcgtttgttaagtgaaaatgagaaacgtccctttgtggaagaagccgag
aggctcagggttcagcacaagaaggatcatccggattataaataccagcctcggcggagg
aaaagtgtaaaagctggccagagcgattctgattcgggagccgagctcagccagcatgca
gggagccagatctacaaagcagacacagggctaggagcagtgggagattctcaccatcac
agtgatcacacagggcaaactcatggaccacccacccctcctaccacccctaaaacggat
cttcatcatgggagcaagcaagagctgaaacacgaggggcgccgcctagtggagagcggc
cgtcagaacatagacttcagcaatgtggacatctctgaactgagcagcgaggtcattaac
atggagacctttgacgtacgtgagcttgaccagtatttgccactgaatggccactccgcc
atgcccgctgaccatgggcagaactcctcagcagggtcttacggcccttcctattcccac
ccagccaacggcaccactggagcagctcaagtttggactcacaaaagcccatcctcggtg
tcccctactttaaatgaaaccagccagcagagaccacacatcaaaacggagcaactcagc
ccaagtcattacagcgaccaatcccatgggtctccaactcactccgactacggatcctat
agcgcacagtcttgtgccaccacagcttccgccaccacagcggctgcctctttctccagc
tcgcagtgtgactacacagacctccagagttctaattactacaatccttactccgggtat
ccctccagcatttaccagtatccgtatttccattcctcgcggcgcccctacgccacaccc
atcctgaatggcttgtccatccctcccgctcacagccccactgctaactgggaccagccg
gtctacacaaccctgacgaggccttag
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