Chelonoidis abingdonii (Abingdon island giant tortoise): 116814847
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Entry
116814847 CDS
T07367
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116814847 (RAI1)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116814847 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
116814847
NCBI-ProteinID:
XP_032618677
LinkDB
All DBs
Position
Unknown
AA seq
1919 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQQTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYPG
YENSAMEKYHRGNKQLPGQQLQGRPAFSNYTVQENSPYPARYSGEESLQPWGAQQQSLAG
GVAKYEENLMKKSPAPAGSRQYHEQTAQLSFRTHSLHLPQQPPQPPALTYPKLQRQKIQN
DVSSSMSFSQTGHFTQHSQSQFPASSTYSSVPGGSQAAHSYKSCTAPSSQQHERSLGGAA
NLASGQRVQNLHGYQANRISYDQQQQPQQQQQQQPLQGRHHAQETLHYQNLAKYQHYNQP
GQAYCQTDAPVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFQYSQQSL
STGSFPAGITDHSHFMPLLNPSPTDGTSPDTQSGNCKNLQKEKISENLLSDLSLQSLTAL
TSQVENISNTVQQLLLSKSAVPQKKGIKNPPRTPEQLKGQHCSPENSTYSAEQVGTPLSD
PLSTPQSVHAEAQDADYLSGSEDQLERNFLYCSQSRSPARVNSNSKAKPESVSTCSVTSP
DDMSTKSDDSFQSIHASLPLETFAKYMTNERECPRLLLSTLSQEELASEIIVLQDAINEK
ADKAWANSPALNKDSAKSPFHVENHRTCLDSMVKSTWSNQGDSGTHTEPLKLDKASGGNN
SKDFSEEIYENAQVEFTTTETKNALKVTSSLAYNSKPNIPAATSSSGATSYSCYSNPTAN
SVGSENAMESFDWPEESISESCLRWKELGPCLQSSDLSKGLFHSKLAESCKEKKNACCMD
ICDGEQPAKNEQAEDFSQQQMGEEEEDTLTYDEATKADSERWLEDTRHCCSGGDFSEIPM
ISSPDLKESDLEPEEYSSLCELASSEQKSVIYDTSPPKPPENAAVLSSKDVPVSAEETVS
AMEKENSGPSSRLSGQSVILLGPAVGTETKVKSWFESSLPHIKPEEDTTVGESVLQEKTE
TETMLSVKVKKQMLPENLLVKSESISRGKTLRSKRVHSRLSEGEESRKPVPSPFKNIQAA
GMVANTCVGPDGPMETTSKNAHGQTPRFPNEGLPARMCTRSFTALSEPRMPAPLEGLKVL
AHQEKLGKKPVCGMKQRVAFKARKRTGRPAPKVVQNPSDPISLLVPNLVQNEDFIGQKAK
GLEPHDAEVKDQRSMILRSRTKTQEVYTKRRREKRTAEVRIKNCKTPKKLLSNNHLPPTF
KITSPGGPHKEGKVGKRMKLPKSGPGMGSKMSERPLHSLKRKSTFMSPIPAKKRNLVLRS
SNSSTKEEKPEASPNLFKRMPSTKKARAKLPTKSSCEAALMPPPAKEPPNVCIKITSRAA
FQGAMKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKTAAATATAHSNPLSPAGAEKER
ALKNASVTPAVGEAGPLNQGMAQKAPAASVAEQLCRNSNNRSLKGKLMNSKKLSSDCFKG
EAYSSPETVQYNSSSMAAKSISVLPKKRNRKGKAAAFSVAKNPLDRRAHLTPALLLTARE
RAGAGDTLGNGEDGQRDGKKPKTEDKDFAKKEPPEGRSSQTQTRAQKQRANHSNYNGYSK
RQRKRHTRSKAKNVASRCKSRVKRRRQQQAPLLNPAEPEIRLKYISCKRLRTDSRAPPFS
PYVRVEKHNEFTTTCTIINSAGEEARLRKEQQPSSSAQALLPGGASLQPKAALPLSSTMH
LGPVVSKALNAACLVCCLCRNPANYKDLGDLCGPYYPEHCLPKKKSRLKEKIKVEGPSEE
SPVPSPAERTLKTTDNNCTTSTISGKPPRLDSAADSAKQSALRSSSRGMFRKLQSCYCCD
ERTEGEEAAEKPRRHECNKAESPSQESVGDTQEHWVHEACAIWTAGVYLVAGKLYGLQEA
IKVAAEVRCSSCQQAGATIGCCHKGCVQTYHYACAIDTGCLLTEENFSLKCPKHKRQPL
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagaactaccagcagact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcgtcagaggctggtggcgaaagagtactacagtcagcagcagctgccttacccaggg
tacgagaacagcgccatggagaaatatcacaggggaaataagcaattgcctggccagcag
ctgcaaggccggccggccttttcaaattacacagtccaagagaatagcccgtacccggcc
cgctattctggcgaggagagcctgcagccctggggagctcagcaacaatccttagccgga
ggagtggcaaagtatgaggaaaacttgatgaaaaagagcccggctcccgccggcagcagg
cagtaccatgagcaaacggctcagctttcattccgaactcattccttgcacctgccgcag
cagccgccgcagccacctgccttgacatatcccaagctgcaaaggcagaagatccaaaat
gacgtctcctcatccatgtccttttcccagaccggccactttacccagcactcccagtcc
cagttcccagcatcttcaacgtactcctctgtcccaggagggagccaggcagctcattca
tataaaagctgcaccgcgccctccagccaacagcatgagcggtctcttggaggggctgct
aacctagcatctgggcagcgagtacagaacctgcatggctatcaggcaaaccgaattagc
tacgaccagcagcagcaaccacagcagcaacagcagcagcagcccttgcaaggaaggcat
catgcccaggaaacgcttcactatcaaaacctagcaaagtaccaacattataaccagcca
ggccaggcctattgccagactgatgctccagtgaggaccccagagcaatattaccagaca
tttagtcctagctcaagtcattctccagctcgttctgttggtagatctccatcctatagc
tccactccatcccctctgatgccaaacctggagaatttccaatacagccagcaatctctc
agcacagggtctttccctgccggcatcactgaccacagccatttcatgcctttattgaat
ccttctccaacagatgggacgagtccagatactcagtctgggaactgcaaaaacttgcag
aaggagaagatctctgaaaatcttctgtctgatctcagtttgcaaagtctaactgcgctc
acctcacaagtcgagaatatttccaacaccgtccagcagcttctcctttcaaaatcagca
gtgccccagaaaaaaggcatcaaaaaccctcctaggacaccagaacagctaaaaggccaa
cactgcagtccagagaatagcacgtactctgccgagcaggttgggacgcccctgtcggac
cctcttagcacccctcagtcagtacatgctgaagctcaggatgccgattatctgagcggg
tctgaagatcagctagagagaaacttcctttattgcagtcaaagccgcagtccagcgagg
gtcaacagcaactccaaggccaagcccgagtcggtctctacttgctcggtgacttctcca
gacgacatgtccacaaagtccgatgattctttccagagtattcatgctagcctgcccttg
gaaacattcgccaagtacatgaccaatgaaagggagtgcccgaggctgctcctgagtacg
ctgtctcaggaggaactggcttccgaaatcattgtgctgcaggatgctatcaacgagaag
gcagacaaagcctgggccaactcccctgctttaaacaaagactccgccaaatcccctttc
catgtagaaaatcacagaacgtgtctggactcaatggttaagagcacctggtccaaccaa
ggtgactcaggtacccacactgaacccctgaaattggacaaagcctctggtggaaacaac
agtaaagatttcagtgaagagatttatgagaatgcccaggtggagtttacaacaactgaa
acaaagaatgctcttaaagtcaccagttccctggcatataattccaaacccaatatccca
gctgctacttcgagttctggggccaccagttacagctgctattcaaaccccacggccaac
tcagtgggttctgaaaatgccatggagtcttttgactggccagaggaaagcatcagtgaa
tcatgcctgaggtggaaggagcttgggccatgcctacaatcgtcagatctttccaagggt
ttgttccacagcaaattggccgagtcttgcaaagagaaaaaaaatgcctgctgcatggat
atatgtgacggcgaacagccagcgaagaatgagcaagccgaggacttcagccagcagcag
atgggggaggaagaggaagacactttgacgtatgatgaggccacaaaagcagatagtgag
aggtggctggaggataccaggcactgctgttcaggtggggacttcagtgaaatcccgatg
atatcatctccagatctgaaggagtctgatttggaaccagaagaatattcatctctgtgt
gagctggctagttcagagcagaagtctgtgatctatgatacatccccacctaaacctcct
gagaatgctgcagtgctctcctccaaggatgtgccagtatcagcagaagaaactgtaagc
gcaatggagaaagaaaattcaggtccctcttctcgtttgtctggacagtctgttatcctc
ttaggcccggcagtcggcactgaaaccaaggtgaaaagttggtttgaatcttccctgcct
cacattaaaccagaggaggacacaacagtaggtgagagtgtcctccaggagaagacagag
accgaaacaatgttgtcggtcaaggtaaagaagcaaatgctaccggaaaatttgctggta
aaatcagaatcaatctcgaggggcaagactcttcgcagcaagagagttcattctaggttg
tcagaaggagaggaatccagaaaaccagtaccaagcccgttcaaaaacatccaggcagct
ggcatggtggccaacacatgtgtagggccagatggcccgatggaaacaacaagcaaaaat
gcccatggccagactcctaggtttccaaatgaaggcttgccagctcggatgtgtacccgc
tctttcactgccttgagtgagcccaggatgccagccccactggaaggactgaaggtcttg
gcccatcaagaaaagttagggaagaaaccagtttgtggcatgaagcagagagttgctttc
aaagccaggaaacgcactggaagaccagccccaaaagttgtccaaaatcccagcgatccc
atttctctcctggtcccaaacttggtgcagaacgaggactttattggccagaaggctaaa
ggcctggagccccacgatgcagaggtgaaggaccagagatccatgatcctgcgatctagg
accaagacacaggaggtctatacaaaaaggagaagggagaagagaacagcagaggtcagg
atcaaaaactgtaaaacacccaagaagctcctttcaaacaaccatctaccccccaccttc
aagatcacatccccaggggggccacacaaagaagggaaggtgggcaaaagaatgaaactc
cccaaatccgggcccggaatgggcagcaaaatgtctgagcggccactgcattcgctgaag
agaaaatccaccttcatgtcccctatccctgccaaaaagagaaatttagttttaaggagc
agcaacagcagcacaaaagaggagaagcccgaagcctcccccaatctctttaaaaggatg
ccatcaaccaaaaaggcaagagctaaactgcccacaaagagctcctgcgaagcagccttg
atgccccctccagctaaagaaccccccaacgtctgtattaaaatcacctctcgggcagca
tttcagggggccatgaagacaaaagtgctacccccaaggaaaggcaggggcctcaagctg
gaggccattgtgcagaagatcacctcgccgaatttaaagaagtttgcatgcaaaacggcc
gctgccaccgctactgcacacagtaatcctctgagccctgccggcgcagagaaggagcgg
gccttaaagaatgcaagtgtaaccccagcggtgggagaagcggggccattaaaccagggc
atggcacaaaaggctcctgccgcttcagtagcagagcaattatgcagaaattcgaacaac
agatccttaaaaggaaaactaatgaacagtaagaaactgtcctctgactgtttcaagggt
gaggcctattcatctcctgagacagtgcagtacaacagcagcagcatggctgcaaagagc
atcagcgtgctgcccaagaagaggaaccgaaaagggaaagcagcagccttcagcgtggcc
aaaaacccattggacaggcgtgcgcatctcacccctgctctgctcctgacggccagagag
cgggcaggtgcgggggacacgctggggaacggggaagacggacaaagggacgggaagaag
ccaaagaccgaggacaaagactttgccaagaaggaaccccccgaggggagaagctcccag
acccaaacccgggcgcagaagcagcgagcgaaccactccaactacaacggctactccaag
agacaaaggaaacggcacacccgtagcaaggccaagaacgtggcctccaggtgtaaaagc
agggtgaagcggcggcggcagcagcaggcccctctgcttaaccccgcggagcctgaaatc
agactcaagtacatctcgtgcaagcggctgcggacggacagccgagcaccgcccttctcc
ccctacgtgcgggtggaaaagcacaacgagttcaccaccacctgcacaatcatcaactca
gccggggaagaggccaggctccgcaaggagcaacagccttcatcctcggctcaggccctg
cttcctggtggggcctccctgcagcccaaagcggcgctgcctttatcttccacaatgcac
ctgggcccagtggtgtccaaggccctcaacgcagcctgtctggtctgctgcctctgccgg
aacccagccaattacaaagaccttggggacctctgtggtccgtattacccagagcactgc
ctgccgaaaaagaaatcaaggctgaaagaaaagattaaagtggagggaccaagcgaagag
tctcccgtgccttcgccagcagagagaacactcaaaacgacagataataattgtacaacg
agtacaatcagtggaaagccgccaaggctggacagtgccgctgactcagcgaaacagagc
gctctccggtcgagttccaggggaatgtttaggaaactacaaagctgttactgctgtgat
gagaggacagagggagaggaggcggcagagaagcccagaaggcacgagtgcaacaaagcc
gagtccccgtctcaggagtcagtgggagacacgcaggagcactgggttcacgaagcctgt
gctatatggaccgctggggtttacctggttgcagggaagctgtatgggctacaggaggcg
ataaaggtggctgctgaagtgagatgctctagttgccaacaagcaggagcaaccattggg
tgctgccacaagggatgtgtccaaacctatcattacgcatgtgccattgacacaggttgc
ttattaactgaagagaacttctctcttaaatgtcccaaacataagaggcagccgttataa
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integrated database retrieval system
