Chelonoidis abingdonii (Abingdon island giant tortoise): 116815082
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Entry
116815082 CDS
T07367
Symbol
SRCAP
Name
(RefSeq) helicase SRCAP isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116815082 (SRCAP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabi03036
]
116815082 (SRCAP)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
116815082 (SRCAP)
SWR1 complex
116815082 (SRCAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
DEAD
K-box
HDA2-3
DUF7091
CCDC157_N
Motif
Other DBs
NCBI-GeneID:
116815082
NCBI-ProteinID:
XP_032619013
UniProt:
A0A8C0GCM5
LinkDB
All DBs
Position
4:4767769..4797142
Genome browser
AA seq
3060 aa
AA seq
DB search
MQSNPPQQHHALHSEIAPDKMTGSNPVSPASSGSPASSGSISPSHQTHDSSLDSHLGFDV
PRLQSKALASPGVYTSDPASMWDKTHAEIAEQAKHEAEIENRIAEMKKEGFWSLKRLSKV
PEPVRPKVHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQKQKEERAKREE
QAKLRRIASSIAKEVKQFWSNVEKVVQFKQQSRLEEKRKKALDLQLDFIVGQTEKYSDLL
TQSLNETFPMASKTGSSSHISSSHAGSTASSPPPPLHLTDEEDGDFQPHEESDDEETIEV
EEQQEGNDSETHRREIELLKQESELPLEELLQSLPSQILENSCSTAPSISSSNNNEEEEA
VGESEEEQEKAKSVMQRNKRPWKPDKEDEEFTANEEEAEDEEETIDAEEKLEGDMDHRKE
LDDLAQEGELPMEELLQRYAGAYASDFEMDESDSSSDASEPSTSEYEEESEDEDSSSQSD
STAEEESEEEEESEEEEDAPAEEATAASQEEDFGVEYLLKRDEDRGEGGNDAAPALGPKK
EITDIAATAESLQPKGYTLATTQVKTPIPYLLRGTLREYQHIGLDWLVTMYEKKLNGILA
DEMGLGKTIQTISLLAHLACEKGSWGPHLIIVPTSVMLNWEMEIKRWCPSFKILTYYGAQ
KERKLKRQGWTKPNAFHICITSYKLVLQDHQAFRRKNWKYLILDEAQNIKNFKSQRWQSL
LNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYN
ESLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIKCRLSKRQRYLYDDFMAQATTKETL
ATGHFMSVINILMQLRKVCNHPNLFDPRPIHSPFITEGICFSTASLILCALNQDPFKHVD
MGIFDLINLEGRVSRYEADTFLPKWKVTRKLIEEIAESPDPPPRPKPVKMKVNRMLQPVP
KPENRTVVLVNSPRPVAPLQRPMTPVLPEALAPMYPMGPVLPGPVQPPLLPHPMAVPISL
PLPLPPSPVPVPPSTRPQGPTLVPTLSQNNTAAAVLQAPVSAPQVLPTLMPAAQLVPNAP
QPPVLPAPATAAAASTLKPGPLPAPAMRLATNPLNPGAVGSMMKPVTVHSTTSALPGYNF
PATSAVQQRVLLSPDMQARLPSGEVVSIAQLASLANRPLQSAPGSKPLTFQIQGNKLTLT
GTQVRQVTMAQPRQLQRNVVHLVSAGGQHHIISQPAQVALIQAMTQQGGQAQGGVQAMPG
PQPTTILPAPASATTAAATSAAISVPIATTQVPSSMVNSSGVVKIVVRQAPRDGLVPAPA
LQQPPRPATATTLPSLPAALMAQRAQLPVAPMPPVRLPTQPLVPVRTPTPLQALVRPMIR
VVQAPVPSMEQSSPAPAPSSPVTATPLPNPPATTIAAAICPALAPRPAAAPSPGPKEEPE
TLMLRSTTPTPPPPSPRAPRHRRQPPPPPRSPFYLESLEEKRKKQKEERLDRLFRLNEQH
CNLAPIYGTEVLRLCTLFPPGPPREQEEEGQEVAPELDGWRGTSYSHCYMAQMHRDPQHL
EAYWQRATAIAQAILTPQQRVEQLADIIERFIFAMPPVEAPAITIHTSHPPPSLLLHQAI
FKETLRREISPRASGLHRIVCNMRTQFPDLRLIQYDCGKLQTLDLLLRQLKAGAHRVLIF
TQMTRMLDVLEQFLNYHGHIYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGV
NLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRM
LGDMAIEGGNFTTAYFKQQTIRELFEMPLDEPAKKEGEVFTIAQEDEEDPMANKQTQILE
QALCKAEDPEDIRAATQAKAEQVAELAEFNENIPLDADERPSKEEEEEMSKAEQEIASLM
EQLTPIERYAMNFLEASLEDISREELKQAEEQVEAARKDIDQAKDEVVFKLPDDEDEGRL
SEEGYIKKSKKAKVPSRAGPERTGTRMSERLRGTRLSLREADGVDTESPQARLPSLRHLR
GHHARLEAEEAEDHLSLVAQHTRGAAIRRDLVREETPPLTRKAAAKREELGTKVPGAGER
VLRPIPHRTEAPVIGERVLRTSPQRPEPPATGDKVLRGTSQRAEPPAPIERVLRAIPQRA
DTLVPGDRMLRGAPQRAEPLATMERVLRSAPLRTDTLAPGDRMPRLAPLRPGAPPAGEQD
LRPEAPVTGAKLLQPRPEVAPVREETPQPTLQATEMGIVLGVPALLGHESTAPTGELASK
KPPAEHMPRVEPPPTWEKVLGSMELTTGVKMGSVESSSASEKVPLPAPCSLEIPAPHKPV
PSPETLASGEEPPEGAKGSLDKAEVAGELAQRPVELDGMDVKRGEPVRRALEEPESLAPD
GPAAELPPETPAHVAARTGVELSAAEPFSTTEGKGPGEVEPQPAWPLLGSLNQPVEADNS
LPRLKTPPPSKEHNGLEQPSPLSNSLAKPQPRELAQGATEPLEIAIGCSSSLKEVSKRGL
DQEHKPKHPDGVSAANTASLGLGEMQPGTTSSSDSPSPAKTPRRRTSADVEIRQNHQGQD
GPAAKVLRKLPGRLVTVVEEKELIRRRRNRIHKLDATSSAVVSPSSSSAHSISELELSPS
SKELPLLRDLPARRRIELESRAAKERGDEGSGLELPPSLPPPPLKRKRGRPPKNKSPEQP
SQGETQLPPSTHVPRIRKPEIKTPEPSSPKTLKQPCKGEARPPPGTLKPRAQKLEPKAPE
PASPRSKTESSENDSPLEKRRRGRPPKAHWAPATPSTESPPKRKRGRPPKNPASPRVETA
APRPGSTSDRDTSAEKELPPPGRKRRWRRKEEPGQAPSESSSDGEEARPLTRLARLRQEE
KLESGSECSTLLPSQSAAPKPEPDGTSSGESSTSEQTPARSTRQRPGSLVPPLEQEHQRR
KRGCLSEGGKSPRAAGSSEDDGGGESESSAELSGEEGERRPKRRRRHAGRATGSRRRQCP
RGSSADRVLRSAAATPASNTRSATGPTPGGVAGAPTPSATAAPAAMVTSSLSIRGRKPKT
NT seq
9183 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaatcctccccaacagcaccatgcactgcacagtgagattgcaccagacaaa
atgacggggagcaatcctgtgtcaccggcctcttcggggtcacctgcctccagtggcagc
atctcaccatcacaccaaactcacgattcctctctggacagtcacctgggctttgatgtg
cccaggctgcaaagcaaagctctggcgtccccaggagtttacacctcggacccggccagc
atgtgggacaagacgcatgctgagatcgctgagcaggccaagcatgaggcggagattgag
aaccgcatcgcggagatgaagaaggagggtttctggtctttgaagaggctctccaaggtg
ccggagccagttcgccccaaggtacactgggattacctctgtgaggagatgcagtggctt
tcggcagactttgcccaagagagacgctggaagaggggagtggccagaaaggtcgtgcgg
atggtgatccgacaccatgaggagcagaaacagaaggaggagcgagccaagcgggaggag
caggccaagctgaggcgcatcgcctcctccatcgccaaagaggtcaagcagttctggagc
aatgtggagaaggtggtgcagttcaagcagcagtctcgcctggaggagaaaaggaagaag
gccctggacctgcagctggacttcatcgtgggccagacggagaagtactcagatctgctg
actcagagcctcaacgaaaccttccccatggccagcaagactggctcctcctcccacatc
agctcctcccatgctggctccaccgcttccagccccccgccacctctacacctcactgac
gaagaagatggggacttccagccccatgaggagtcagacgacgaggagacgattgaggtg
gaggagcagcaggaagggaacgactcggagacgcaccggcgtgagatagagctgctgaaa
caggagagtgagctgcccctggaagagctgttgcagtccctgccctcccagatcctggag
aattcctgcagcactgccccctccatctccagctccaacaacaacgaggaggaggaggca
gtgggggagagtgaggaggagcaggagaaagcaaagtccgtcatgcagaggaacaaaagg
ccatggaaacctgacaaggaggatgaggagttcacggccaacgaggaggaagctgaggat
gaagaggagacaatcgatgctgaagagaagctggaaggggacatggatcacaggaaggaa
ctggatgacttggcccaggaaggggagttgcccatggaggagctgctgcagagatacgcc
ggcgcctatgcctcagactttgagatggatgagtcagatagctcctcggatgcctcggag
cccagcacctcggagtacgaggaggagtcagaggacgaggacagcagcagccagtcagac
tccactgcagaggaggagagtgaggaggaggaggagagcgaggaggaggaggatgccccc
gctgaggaagcgacggcagcgagccaagaggaagacttcggcgtggagtacctattgaaa
agggatgaggatcggggagaggggggtaatgacgcagcccccgccctgggacccaagaag
gagatcacagacatcgcagccactgccgagagcctgcagcccaagggctacaccctggcc
accacccaggtgaagacacccatcccttacctgctgcgggggaccctgcgggagtatcag
cacatcggcctggactggctggtcaccatgtatgaaaagaagctcaacgggatcctggcg
gatgagatggggctggggaagaccatccagaccatctccctgctggctcacctggcctgc
gagaagggtagctggggtccccacctgatcatcgtgcccaccagtgttatgctgaactgg
gagatggagatcaagcgctggtgccccagtttcaagatcctcacctactatggggcacag
aaggagcgcaagctcaagcgtcagggctggaccaagcccaatgccttccatatctgcatc
acctcgtacaagctggtgctgcaggatcaccaggcattccggcgcaagaactggaagtac
ctgatcctggatgaggcccagaacatcaagaacttcaaatcccagcgctggcagtcgctg
ctcaacttcaacagtcagaggaggctgctgctgacaggcacccccctgcagaacagcctg
atggagctctggtccctcatgcacttcctgatgccccacgtcttccagtcgcaccgcgag
ttcaaggagtggttctccaatcccctgacaggcatgattgagggtagccaggagtacaac
gagagcctggtcaagcggctgcacaaggtgctgcggcccttcctcctgcggagggtgaaa
gtggatgtggagaagcaaatgccaaagaaatatgagcacgtcatcaagtgccggctgtcc
aagcgccagcgctatctctacgacgacttcatggcccaggccaccaccaaggagactctg
gccacagggcatttcatgagcgtcatcaacatcctgatgcagctgcggaaggtgtgcaac
catcccaacctcttcgacccccggcccatccactcgcccttcatcaccgagggcatctgc
ttcagcaccgcctccctcattctgtgcgccctcaaccaggatccctttaagcatgtggac
atgggcattttcgacctcatcaacctggaggggcgcgtgtcccgctacgaggccgacacc
ttcctgcctaagtggaaggtgacaaggaagctgattgaggagatcgccgagtccccggac
cccccgcccaggcccaaacctgtcaagatgaaagtgaacaggatgctgcagccggtgcca
aagccagagaaccggaccgtggtgctggtgaacagccctcgccccgtagcccccttgcag
agacctatgactcctgtgttgccagaggccctggcccccatgtaccccatgggcccagtt
ctcccggggcccgttcagcctcccctgctccctcaccccatggccgtacccatctcgctg
cccctgcccctcccgccatccccggtgccggtgcctccctctaccaggccgcagggccca
acgctagtgcctacgctgagccagaacaacaccgctgccgcagtgctccaggccccagtg
tccgccccgcaggtcttgcccacactgatgcctgcagcccagctggttccgaatgccccc
cagccccccgtgctgccggcccctgccaccgcggctgctgcctccaccctcaagcccggc
ccgctgccagcccccgccatgcggctagccaccaaccccctgaacccgggcgctgtgggg
agcatgatgaagccagtgacagtccattccaccaccagcgccctgcctggctacaacttc
ccggccaccagcgctgtgcagcagagggtgctgctctctccggacatgcaggcccggctg
ccctcgggcgaggtggtgagcatcgcacaactggcttcgctggccaaccggcccctgcag
agcgccccaggcagcaagcccctcaccttccagatccaaggcaacaagctgaccctgacg
ggcacccaggtgcggcaggtcaccatggcccagccccgacagctgcaaaggaatgtagtt
cacctggtctctgccggggggcagcaccacatcatcagccagccagcccaggtggctctc
atccaggccatgacccagcagggcgggcaggcacagggtggggtgcaggccatgccaggc
ccccagcccaccaccatcctgcctgccccagcctctgccaccacggcagccgccacttca
gcagccatcagcgttcccatagctaccacgcaagtgccctcctccatggtgaacagctct
ggtgtggtgaagatcgtggtgcggcaggccccacgggacggcctggtgcctgccccagcc
ctacagcagcctccacgcccagccacagccaccaccctgcctagcctgccggccgctctg
atggcacaacgagcccagctccccgtggcacccatgccgcctgtgcggttgcccactcag
ccactggttccagtgcgaacacccaccccactgcaggccctggtgcgacccatgatccgg
gtggtgcaggcgccagtgcccagcatggagcagtcatctccagcaccggctccatcttct
cccgtcacggccacccctctccccaacccccctgccaccaccatcgctgctgctatctgc
cctgcactggctccccggcccgcagccgcgcccagcccggggcccaaggaggaacctgag
acactaatgctacggtccaccacgcccaccccgcctcccccgtcgccacgggccccacgg
cacagacggcagccccctcccccaccccggtctcccttctatctggaatcacttgaagag
aagcggaagaagcagaaggaggagcgcctggaccggctcttccgcctcaatgagcagcac
tgcaacctggcccccatctatggcaccgaggtgctgcgcctctgcaccctcttcccaccc
ggccctcctcgggagcaggaggaggaggggcaggaagtggcacccgagctggatggctgg
agggggaccagctacagccattgctacatggcacagatgcatcgggacccccagcaccta
gaggcgtattggcagcgggccacagccattgcccaggccatcctgactccccagcagagg
gttgagcagttggcagacatcattgagaggttcatctttgctatgcctcccgtggaggcg
cctgccatcaccattcacacctctcacccgcccccgtcactcctgctccaccaggccatc
ttcaaggagacactgcggcgggagatctcgccccgcgccagcggcctgcatcgcatcgtc
tgcaacatgcgcacccagttccccgacctgcgcctcatccagtatgactgcgggaagctc
cagaccctggacctgttgctgcgacagctgaaggctggagcgcaccgggtcctcatcttc
acccagatgacccgcatgctagacgtgctggagcagttcctcaactaccatgggcacatc
tacctgcgcctggatggcagcactcgcgtggagcagagacaggcgctgatggagcgtttc
aacgctgacaagcgcatcttctgcttcatcctgtcgacacgcagcggaggcgtgggtgtg
aacctgacgggcgctgacactgtggtgttctacgacagcgactggaaccccaccatggac
gcccaggcccaggaccgctgccaccgcatcggccagacccgcgatgtccacatctacagg
ctgatcagcgagcggacagtggaggagaacatcctgaagaaggccaatcagaagaggatg
ctgggagacatggccattgagggcgggaacttcaccacagcttacttcaaacagcaaacc
atccgggagctcttcgaaatgcccctggatgagccagccaagaaggaaggggaggtcttc
accatagcgcaggaggacgaggaggatcccatggccaacaagcagacccagatcctggaa
caggcgctgtgcaaggctgaggaccctgaggacatccgtgcggccacgcaggccaaggct
gagcaggtggcagagctggcagagttcaacgagaacatccccctggacgcggacgagcgg
cccagcaaggaggaggaggaggagatgtcgaaggctgagcaggagatcgcctcgctcatg
gagcagctcacccccattgaacgctatgccatgaacttcctggaggcctctctggaagac
atcagccgagaggagctgaagcaggcagaggagcaggtggaggctgcccggaaggacata
gaccaggccaaggatgaagtggtgttcaagctgcccgacgacgaggacgagggtcggctc
agcgaggaaggctacatcaaaaagagcaagaaagccaaggtgcccagccgtgcgggccca
gagcgcactggcacacgcatgagtgagcgactgcggggcactcgcctctccctgcgcgag
gcggatggagtggacaccgagtcacctcaggcccggctccccagcctgcgccatctgcgg
ggccaccatgccaggctggaggccgaggaggcagaagaccacctgtccctggtggcccag
cacacacgtggcgcagccatccgcagggacctggtgcgggaggagacgccacctctgacc
cgcaaggccgcggccaagagggaggagttggggaccaaggtcccaggggctggcgagagg
gtgctgcggcccatccctcacagaacagaggcccccgtcattggggagagggtgctccgg
acctctccacagagacctgaaccccctgccaccggagacaaggtgctgcgaggcacctcc
cagagagctgagcccccagcccccatagagcgggtgctccgagccatccctcagagagca
gacaccctagtccccggggacaggatgctacgaggtgccccacaacgagcagagcccctg
gctaccatggagcgggtgctgcgcagtgcacccttgagaacagacactctagctcctggg
gacaggatgccccggctggccccgctcagaccaggggcacctcctgctggggagcaggat
ctgagacctgaggcaccagtgactggtgcgaagctcctccagccaagacctgaggtagca
cctgtcagagaggagaccccccaaccaacactccaagctaccgagatggggatagtcttg
ggggtgccggccctgctagggcatgagagcacagcacccacaggggagctagcctcaaag
aagccccctgctgagcacatgccgagggtggaacccccacccacttgggaaaaagtgctg
ggatccatggagctcacaacgggggtgaagatggggagcgtggagtcatcttctgcctca
gagaaagttcccctaccagccccctgcagcctggagatcccagccccccacaagccggtg
ccaagcccggagacgctagcctcaggggaggagccacccgaaggagccaagggatctttg
gacaaagctgaggtagccggagagctggcccaacgcccagtggagctggacggtatggat
gtgaagaggggagagccagtcaggcgtgccctggaggagccagagagcctggcacccgat
gggcccgcagcagagctccccccggagacacctgcccacgtcgctgctaggacaggggtt
gaactgtccgctgctgagcctttctccaccacagagggcaaagggccaggagaggtggag
ccccagccagcctggcctctcttgggctccctgaaccagccggtggaggctgacaactcc
ctgcctcgactgaaaacaccaccccccagcaaggagcacaacggactagagcagccttcc
cctctctccaacagcctggccaagccccagcccagggagctggcacagggtgccacagag
ccactggagatagccattgggtgcagcagcagcctgaaggaggtgtccaagagggggctc
gaccaggaacacaagcccaagcacccagatggagtgagtgcagccaacactgcctccctg
gggctgggggaaatgcagccagggacgacctcctcctcggacagtccatcgccagccaaa
acaccgcgccggcgcaccagcgctgacgtagagatccggcagaaccaccagggccaggac
ggcccagctgccaaggtcttgcgcaagctgccaggccgcctggtcactgtggtggaggag
aaggagctgatccgacgccggcgcaaccgcatccacaagctggatgccaccagcagcgct
gtggtgagccccagcagcagttcggcccacagtatctccgagctggagttgtccccctcc
agcaaggagctgccactgctccgcgacctgcctgcccgccgcaggattgagcttgagagc
cgggccgccaaggagaggggagatgaggggtctgggctggagctgccccccagcctgccc
ccgccacccctcaaacgtaaacggggccggccccccaagaacaagtctccagagcagcca
agccagggagaaacacagctaccacccagcacccatgtaccccgcatcaggaagccagag
atcaagactcctgagccatcctcacccaagaccctgaagcagccatgtaagggggaggca
cggccaccgcccggcaccctgaagccacgtgcccagaagctggaacccaaggcccctgag
ccagcttcaccccggagcaagacagagagcagtgagaatgactcccccttggagaagcgc
cggcgtggccgaccccccaaggcacactgggcccccgccactcccagcactgagtcaccc
cccaagcgcaagcggggccggccccccaaaaacccagcttccccccgcgtggagacagca
gccccccgccctggctcaacctcggaccgcgacacctccgccgagaaggagctgccccca
cctggccgcaagaggaggtggagaaggaaggaagagcctggccaggcccccagtgagagc
tcgtcggatggcgaggaggcccgccccctcacccggctggcccgtctccggcaagaagag
aagctggagtcgggcagtgagtgttcaaccctgctcccatcccagagcgctgcccctaag
ccggagccagacggcacctcctcaggggagagcagcacctccgagcagaccccggcccgc
tccacccgccagcgccctggcagcttggtgccaccgctggagcaggagcatcaaaggcgc
aagagggggtgcttgtcagagggcggcaagtcccccagggcggccggctcatcggaggac
gacggggggggcgagtcagagtcctcagcagagttgagcggcgaggagggtgagcggcgg
cccaaacgccgccgccgtcacgcaggccgagccactggcagcaggaggcggcagtgccca
cggggcagttcggccgaccgcgtcctgcgaagcgctgccgccaccccagccagcaacacc
cgctcggccaccggccccacgccggggggtgtggctggagcccccaccccgtcggccacc
gctgctcctgccgccatggttacctcctcactaagtatcagaggccgcaagcccaaaacg
tga
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integrated database retrieval system
