Chelonoidis abingdonii (Abingdon island giant tortoise): 116815082
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Entry
116815082 CDS
T07367
Symbol
SRCAP
Name
(RefSeq) helicase SRCAP isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116815082 (SRCAP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabi03036
]
116815082 (SRCAP)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
116815082 (SRCAP)
SWR1 complex
116815082 (SRCAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
K-box
HDA2-3
DUF7091
Motif
Other DBs
NCBI-GeneID:
116815082
NCBI-ProteinID:
XP_032619010
Ensembl:
ENSCABG00000003545
LinkDB
All DBs
Position
Unknown
AA seq
3159 aa
AA seq
DB search
MKSVGWEPGVCRSSLPRERETVEVESDEEEEFSAHTGDSETGSPERRLGCQGTQELDSSS
QRLLDQNEAGSQHALEQDDSTSATSKAIGARGEEQGSSKMQSNPPQQHHALHSEIAPDKM
TGSNPVSPASSGSPASSGSISPSHQTHDSSLDSHLGFDVPRLQSKALASPGVYTSDPASM
WDKTHAEIAEQAKHEAEIENRIAEMKKEGFWSLKRLSKVPEPVRPKVHWDYLCEEMQWLS
ADFAQERRWKRGVARKVVRMVIRHHEEQKQKEERAKREEQAKLRRIASSIAKEVKQFWSN
VEKVVQFKQQSRLEEKRKKALDLQLDFIVGQTEKYSDLLTQSLNETFPMASKTGSSSHIS
SSHAGSTASSPPPPLHLTDEEDGDFQPHEESDDEETIEVEEQQEGNDSETHRREIELLKQ
ESELPLEELLQSLPSQILENSCSTAPSISSSNNNEEEEAVGESEEEQEKAKSVMQRNKRP
WKPDKEDEEFTANEEEAEDEEETIDAEEKLEGDMDHRKELDDLAQEGELPMEELLQRYAG
AYASDFEMDESDSSSDASEPSTSEYEEESEDEDSSSQSDSTAEEESEEEEESEEEEDAPA
EEATAASQEEDFGVEYLLKRDEDRGEGGNDAAPALGPKKEITDIAATAESLQPKGYTLAT
TQVKTPIPYLLRGTLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACE
KGSWGPHLIIVPTSVMLNWEMEIKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHICIT
SYKLVLQDHQAFRRKNWKYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLM
ELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNESLVKRLHKVLRPFLLRRVKV
DVEKQMPKKYEHVIKCRLSKRQRYLYDDFMAQATTKETLATGHFMSVINILMQLRKVCNH
PNLFDPRPIHSPFITEGICFSTASLILCALNQDPFKHVDMGIFDLINLEGRVSRYEADTF
LPKWKVTRKLIEEIAESPDPPPRPKPVKMKVNRMLQPVPKPENRTVVLVNSPRPVAPLQR
PMTPVLPEALAPMYPMGPVLPGPVQPPLLPHPMAVPISLPLPLPPSPVPVPPSTRPQGPT
LVPTLSQNNTAAAVLQAPVSAPQVLPTLMPAAQLVPNAPQPPVLPAPATAAAASTLKPGP
LPAPAMRLATNPLNPGAVGSMMKPVTVHSTTSALPGYNFPATSAVQQRVLLSPDMQARLP
SGEVVSIAQLASLANRPLQSAPGSKPLTFQIQGNKLTLTGTQVRQVTMAQPRQLQRNVVH
LVSAGGQHHIISQPAQVALIQAMTQQGGQAQGGVQAMPGPQPTTILPAPASATTAAATSA
AISVPIATTQVPSSMVNSSGVVKIVVRQAPRDGLVPAPALQQPPRPATATTLPSLPAALM
AQRAQLPVAPMPPVRLPTQPLVPVRTPTPLQALVRPMIRVVQAPVPSMEQSSPAPAPSSP
VTATPLPNPPATTIAAAICPALAPRPAAAPSPGPKEEPETLMLRSTTPTPPPPSPRAPRH
RRQPPPPPRSPFYLESLEEKRKKQKEERLDRLFRLNEQHCNLAPIYGTEVLRLCTLFPPG
PPREQEEEGQEVAPELDGWRGTSYSHCYMAQMHRDPQHLEAYWQRATAIAQAILTPQQRV
EQLADIIERFIFAMPPVEAPAITIHTSHPPPSLLLHQAIFKETLRREISPRASGLHRIVC
NMRTQFPDLRLIQYDCGKLQTLDLLLRQLKAGAHRVLIFTQMTRMLDVLEQFLNYHGHIY
LRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDA
QAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTI
RELFEMPLDEPAKKEGEVFTIAQEDEEDPMANKQTQILEQALCKAEDPEDIRAATQAKAE
QVAELAEFNENIPLDADERPSKEEEEEMSKAEQEIASLMEQLTPIERYAMNFLEASLEDI
SREELKQAEEQVEAARKDIDQAKDEVVFKLPDDEDEGRLSEEGYIKKSKKAKVPSRAGPE
RTGTRMSERLRGTRLSLREADGVDTESPQARLPSLRHLRGHHARLEAEEAEDHLSLVAQH
TRGAAIRRDLVREETPPLTRKAAAKREELGTKVPGAGERVLRPIPHRTEAPVIGERVLRT
SPQRPEPPATGDKVLRGTSQRAEPPAPIERVLRAIPQRADTLVPGDRMLRGAPQRAEPLA
TMERVLRSAPLRTDTLAPGDRMPRLAPLRPGAPPAGEQDLRPEAPVTGAKLLQPRPEVAP
VREETPQPTLQATEMGIVLGVPALLGHESTAPTGELASKKPPAEHMPRVEPPPTWEKVLG
SMELTTGVKMGSVESSSASEKVPLPAPCSLEIPAPHKPVPSPETLASGEEPPEGAKGSLD
KAEVAGELAQRPVELDGMDVKRGEPVRRALEEPESLAPDGPAAELPPETPAHVAARTGVE
LSAAEPFSTTEGKGPGEVEPQPAWPLLGSLNQPVEADNSLPRLKTPPPSKEHNGLEQPSP
LSNSLAKPQPRELAQGATEPLEIAIGCSSSLKEVSKRGLDQEHKPKHPDGVSAANTASLG
LGEMQPGTTSSSDSPSPAKTPRRRTSADVEIRQNHQGQDGPAAKVLRKLPGRLVTVVEEK
ELIRRRRNRIHKLDATSSAVVSPSSSSAHSISELELSPSSKELPLLRDLPARRRIELESR
AAKERGDEGSGLELPPSLPPPPLKRKRGRPPKNKSPEQPSQGETQLPPSTHVPRIRKPEI
KTPEPSSPKTLKQPCKGEARPPPGTLKPRAQKLEPKAPEPASPRSKTESSENDSPLEKRR
RGRPPKAHWAPATPSTESPPKRKRGRPPKNPASPRVETAAPRPGSTSDRDTSAEKELPPP
GRKRRWRRKEEPGQAPSESSSDGEEARPLTRLARLRQEEKLESGSECSTLLPSQSAAPKP
EPDGTSSGESSTSEQTPARSTRQRPGSLVPPLEQEHQRRKRGCLSEGGKSPRAAGSSEDD
GGGESESSAELSGEEGERRPKRRRRHAGRATGSRRRQCPRGSSADRVLRSAAATPASNTR
SATGPTPGGVAGAPTPSATAAPAAMVTSSLSIRGRKPKT
NT seq
9480 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcggtggggtgggagccaggggtttgcaggagcagtcttccccgggaaagagaa
accgtggaagtggagtctgacgaggaggaggagttctcagctcacacaggtgattcagag
acaggcagccccgagcgcaggctgggctgccaggggacccaggagctggacagttcgtcc
cagcggttgcttgaccagaatgaggccggttcccagcatgcactggagcaggacgacagc
acttcggccacgagcaaagctatcggggcgcgaggcgaagagcaagggagcagtaaaatg
cagagcaatcctccccaacagcaccatgcactgcacagtgagattgcaccagacaaaatg
acggggagcaatcctgtgtcaccggcctcttcggggtcacctgcctccagtggcagcatc
tcaccatcacaccaaactcacgattcctctctggacagtcacctgggctttgatgtgccc
aggctgcaaagcaaagctctggcgtccccaggagtttacacctcggacccggccagcatg
tgggacaagacgcatgctgagatcgctgagcaggccaagcatgaggcggagattgagaac
cgcatcgcggagatgaagaaggagggtttctggtctttgaagaggctctccaaggtgccg
gagccagttcgccccaaggtacactgggattacctctgtgaggagatgcagtggctttcg
gcagactttgcccaagagagacgctggaagaggggagtggccagaaaggtcgtgcggatg
gtgatccgacaccatgaggagcagaaacagaaggaggagcgagccaagcgggaggagcag
gccaagctgaggcgcatcgcctcctccatcgccaaagaggtcaagcagttctggagcaat
gtggagaaggtggtgcagttcaagcagcagtctcgcctggaggagaaaaggaagaaggcc
ctggacctgcagctggacttcatcgtgggccagacggagaagtactcagatctgctgact
cagagcctcaacgaaaccttccccatggccagcaagactggctcctcctcccacatcagc
tcctcccatgctggctccaccgcttccagccccccgccacctctacacctcactgacgaa
gaagatggggacttccagccccatgaggagtcagacgacgaggagacgattgaggtggag
gagcagcaggaagggaacgactcggagacgcaccggcgtgagatagagctgctgaaacag
gagagtgagctgcccctggaagagctgttgcagtccctgccctcccagatcctggagaat
tcctgcagcactgccccctccatctccagctccaacaacaacgaggaggaggaggcagtg
ggggagagtgaggaggagcaggagaaagcaaagtccgtcatgcagaggaacaaaaggcca
tggaaacctgacaaggaggatgaggagttcacggccaacgaggaggaagctgaggatgaa
gaggagacaatcgatgctgaagagaagctggaaggggacatggatcacaggaaggaactg
gatgacttggcccaggaaggggagttgcccatggaggagctgctgcagagatacgccggc
gcctatgcctcagactttgagatggatgagtcagatagctcctcggatgcctcggagccc
agcacctcggagtacgaggaggagtcagaggacgaggacagcagcagccagtcagactcc
actgcagaggaggagagtgaggaggaggaggagagcgaggaggaggaggatgcccccgct
gaggaagcgacggcagcgagccaagaggaagacttcggcgtggagtacctattgaaaagg
gatgaggatcggggagaggggggtaatgacgcagcccccgccctgggacccaagaaggag
atcacagacatcgcagccactgccgagagcctgcagcccaagggctacaccctggccacc
acccaggtgaagacacccatcccttacctgctgcgggggaccctgcgggagtatcagcac
atcggcctggactggctggtcaccatgtatgaaaagaagctcaacgggatcctggcggat
gagatggggctggggaagaccatccagaccatctccctgctggctcacctggcctgcgag
aagggtagctggggtccccacctgatcatcgtgcccaccagtgttatgctgaactgggag
atggagatcaagcgctggtgccccagtttcaagatcctcacctactatggggcacagaag
gagcgcaagctcaagcgtcagggctggaccaagcccaatgccttccatatctgcatcacc
tcgtacaagctggtgctgcaggatcaccaggcattccggcgcaagaactggaagtacctg
atcctggatgaggcccagaacatcaagaacttcaaatcccagcgctggcagtcgctgctc
aacttcaacagtcagaggaggctgctgctgacaggcacccccctgcagaacagcctgatg
gagctctggtccctcatgcacttcctgatgccccacgtcttccagtcgcaccgcgagttc
aaggagtggttctccaatcccctgacaggcatgattgagggtagccaggagtacaacgag
agcctggtcaagcggctgcacaaggtgctgcggcccttcctcctgcggagggtgaaagtg
gatgtggagaagcaaatgccaaagaaatatgagcacgtcatcaagtgccggctgtccaag
cgccagcgctatctctacgacgacttcatggcccaggccaccaccaaggagactctggcc
acagggcatttcatgagcgtcatcaacatcctgatgcagctgcggaaggtgtgcaaccat
cccaacctcttcgacccccggcccatccactcgcccttcatcaccgagggcatctgcttc
agcaccgcctccctcattctgtgcgccctcaaccaggatccctttaagcatgtggacatg
ggcattttcgacctcatcaacctggaggggcgcgtgtcccgctacgaggccgacaccttc
ctgcctaagtggaaggtgacaaggaagctgattgaggagatcgccgagtccccggacccc
ccgcccaggcccaaacctgtcaagatgaaagtgaacaggatgctgcagccggtgccaaag
ccagagaaccggaccgtggtgctggtgaacagccctcgccccgtagcccccttgcagaga
cctatgactcctgtgttgccagaggccctggcccccatgtaccccatgggcccagttctc
ccggggcccgttcagcctcccctgctccctcaccccatggccgtacccatctcgctgccc
ctgcccctcccgccatccccggtgccggtgcctccctctaccaggccgcagggcccaacg
ctagtgcctacgctgagccagaacaacaccgctgccgcagtgctccaggccccagtgtcc
gccccgcaggtcttgcccacactgatgcctgcagcccagctggttccgaatgccccccag
ccccccgtgctgccggcccctgccaccgcggctgctgcctccaccctcaagcccggcccg
ctgccagcccccgccatgcggctagccaccaaccccctgaacccgggcgctgtggggagc
atgatgaagccagtgacagtccattccaccaccagcgccctgcctggctacaacttcccg
gccaccagcgctgtgcagcagagggtgctgctctctccggacatgcaggcccggctgccc
tcgggcgaggtggtgagcatcgcacaactggcttcgctggccaaccggcccctgcagagc
gccccaggcagcaagcccctcaccttccagatccaaggcaacaagctgaccctgacgggc
acccaggtgcggcaggtcaccatggcccagccccgacagctgcaaaggaatgtagttcac
ctggtctctgccggggggcagcaccacatcatcagccagccagcccaggtggctctcatc
caggccatgacccagcagggcgggcaggcacagggtggggtgcaggccatgccaggcccc
cagcccaccaccatcctgcctgccccagcctctgccaccacggcagccgccacttcagca
gccatcagcgttcccatagctaccacgcaagtgccctcctccatggtgaacagctctggt
gtggtgaagatcgtggtgcggcaggccccacgggacggcctggtgcctgccccagcccta
cagcagcctccacgcccagccacagccaccaccctgcctagcctgccggccgctctgatg
gcacaacgagcccagctccccgtggcacccatgccgcctgtgcggttgcccactcagcca
ctggttccagtgcgaacacccaccccactgcaggccctggtgcgacccatgatccgggtg
gtgcaggcgccagtgcccagcatggagcagtcatctccagcaccggctccatcttctccc
gtcacggccacccctctccccaacccccctgccaccaccatcgctgctgctatctgccct
gcactggctccccggcccgcagccgcgcccagcccggggcccaaggaggaacctgagaca
ctaatgctacggtccaccacgcccaccccgcctcccccgtcgccacgggccccacggcac
agacggcagccccctcccccaccccggtctcccttctatctggaatcacttgaagagaag
cggaagaagcagaaggaggagcgcctggaccggctcttccgcctcaatgagcagcactgc
aacctggcccccatctatggcaccgaggtgctgcgcctctgcaccctcttcccacccggc
cctcctcgggagcaggaggaggaggggcaggaagtggcacccgagctggatggctggagg
gggaccagctacagccattgctacatggcacagatgcatcgggacccccagcacctagag
gcgtattggcagcgggccacagccattgcccaggccatcctgactccccagcagagggtt
gagcagttggcagacatcattgagaggttcatctttgctatgcctcccgtggaggcgcct
gccatcaccattcacacctctcacccgcccccgtcactcctgctccaccaggccatcttc
aaggagacactgcggcgggagatctcgccccgcgccagcggcctgcatcgcatcgtctgc
aacatgcgcacccagttccccgacctgcgcctcatccagtatgactgcgggaagctccag
accctggacctgttgctgcgacagctgaaggctggagcgcaccgggtcctcatcttcacc
cagatgacccgcatgctagacgtgctggagcagttcctcaactaccatgggcacatctac
ctgcgcctggatggcagcactcgcgtggagcagagacaggcgctgatggagcgtttcaac
gctgacaagcgcatcttctgcttcatcctgtcgacacgcagcggaggcgtgggtgtgaac
ctgacgggcgctgacactgtggtgttctacgacagcgactggaaccccaccatggacgcc
caggcccaggaccgctgccaccgcatcggccagacccgcgatgtccacatctacaggctg
atcagcgagcggacagtggaggagaacatcctgaagaaggccaatcagaagaggatgctg
ggagacatggccattgagggcgggaacttcaccacagcttacttcaaacagcaaaccatc
cgggagctcttcgaaatgcccctggatgagccagccaagaaggaaggggaggtcttcacc
atagcgcaggaggacgaggaggatcccatggccaacaagcagacccagatcctggaacag
gcgctgtgcaaggctgaggaccctgaggacatccgtgcggccacgcaggccaaggctgag
caggtggcagagctggcagagttcaacgagaacatccccctggacgcggacgagcggccc
agcaaggaggaggaggaggagatgtcgaaggctgagcaggagatcgcctcgctcatggag
cagctcacccccattgaacgctatgccatgaacttcctggaggcctctctggaagacatc
agccgagaggagctgaagcaggcagaggagcaggtggaggctgcccggaaggacatagac
caggccaaggatgaagtggtgttcaagctgcccgacgacgaggacgagggtcggctcagc
gaggaaggctacatcaaaaagagcaagaaagccaaggtgcccagccgtgcgggcccagag
cgcactggcacacgcatgagtgagcgactgcggggcactcgcctctccctgcgcgaggcg
gatggagtggacaccgagtcacctcaggcccggctccccagcctgcgccatctgcggggc
caccatgccaggctggaggccgaggaggcagaagaccacctgtccctggtggcccagcac
acacgtggcgcagccatccgcagggacctggtgcgggaggagacgccacctctgacccgc
aaggccgcggccaagagggaggagttggggaccaaggtcccaggggctggcgagagggtg
ctgcggcccatccctcacagaacagaggcccccgtcattggggagagggtgctccggacc
tctccacagagacctgaaccccctgccaccggagacaaggtgctgcgaggcacctcccag
agagctgagcccccagcccccatagagcgggtgctccgagccatccctcagagagcagac
accctagtccccggggacaggatgctacgaggtgccccacaacgagcagagcccctggct
accatggagcgggtgctgcgcagtgcacccttgagaacagacactctagctcctggggac
aggatgccccggctggccccgctcagaccaggggcacctcctgctggggagcaggatctg
agacctgaggcaccagtgactggtgcgaagctcctccagccaagacctgaggtagcacct
gtcagagaggagaccccccaaccaacactccaagctaccgagatggggatagtcttgggg
gtgccggccctgctagggcatgagagcacagcacccacaggggagctagcctcaaagaag
ccccctgctgagcacatgccgagggtggaacccccacccacttgggaaaaagtgctggga
tccatggagctcacaacgggggtgaagatggggagcgtggagtcatcttctgcctcagag
aaagttcccctaccagccccctgcagcctggagatcccagccccccacaagccggtgcca
agcccggagacgctagcctcaggggaggagccacccgaaggagccaagggatctttggac
aaagctgaggtagccggagagctggcccaacgcccagtggagctggacggtatggatgtg
aagaggggagagccagtcaggcgtgccctggaggagccagagagcctggcacccgatggg
cccgcagcagagctccccccggagacacctgcccacgtcgctgctaggacaggggttgaa
ctgtccgctgctgagcctttctccaccacagagggcaaagggccaggagaggtggagccc
cagccagcctggcctctcttgggctccctgaaccagccggtggaggctgacaactccctg
cctcgactgaaaacaccaccccccagcaaggagcacaacggactagagcagccttcccct
ctctccaacagcctggccaagccccagcccagggagctggcacagggtgccacagagcca
ctggagatagccattgggtgcagcagcagcctgaaggaggtgtccaagagggggctcgac
caggaacacaagcccaagcacccagatggagtgagtgcagccaacactgcctccctgggg
ctgggggaaatgcagccagggacgacctcctcctcggacagtccatcgccagccaaaaca
ccgcgccggcgcaccagcgctgacgtagagatccggcagaaccaccagggccaggacggc
ccagctgccaaggtcttgcgcaagctgccaggccgcctggtcactgtggtggaggagaag
gagctgatccgacgccggcgcaaccgcatccacaagctggatgccaccagcagcgctgtg
gtgagccccagcagcagttcggcccacagtatctccgagctggagttgtccccctccagc
aaggagctgccactgctccgcgacctgcctgcccgccgcaggattgagcttgagagccgg
gccgccaaggagaggggagatgaggggtctgggctggagctgccccccagcctgcccccg
ccacccctcaaacgtaaacggggccggccccccaagaacaagtctccagagcagccaagc
cagggagaaacacagctaccacccagcacccatgtaccccgcatcaggaagccagagatc
aagactcctgagccatcctcacccaagaccctgaagcagccatgtaagggggaggcacgg
ccaccgcccggcaccctgaagccacgtgcccagaagctggaacccaaggcccctgagcca
gcttcaccccggagcaagacagagagcagtgagaatgactcccccttggagaagcgccgg
cgtggccgaccccccaaggcacactgggcccccgccactcccagcactgagtcacccccc
aagcgcaagcggggccggccccccaaaaacccagcttccccccgcgtggagacagcagcc
ccccgccctggctcaacctcggaccgcgacacctccgccgagaaggagctgcccccacct
ggccgcaagaggaggtggagaaggaaggaagagcctggccaggcccccagtgagagctcg
tcggatggcgaggaggcccgccccctcacccggctggcccgtctccggcaagaagagaag
ctggagtcgggcagtgagtgttcaaccctgctcccatcccagagcgctgcccctaagccg
gagccagacggcacctcctcaggggagagcagcacctccgagcagaccccggcccgctcc
acccgccagcgccctggcagcttggtgccaccgctggagcaggagcatcaaaggcgcaag
agggggtgcttgtcagagggcggcaagtcccccagggcggccggctcatcggaggacgac
ggggggggcgagtcagagtcctcagcagagttgagcggcgaggagggtgagcggcggccc
aaacgccgccgccgtcacgcaggccgagccactggcagcaggaggcggcagtgcccacgg
ggcagttcggccgaccgcgtcctgcgaagcgctgccgccaccccagccagcaacacccgc
tcggccaccggccccacgccggggggtgtggctggagcccccaccccgtcggccaccgct
gctcctgccgccatggttacctcctcactaagtatcagaggccgcaagcccaaaacgtga
DBGET
integrated database retrieval system
