Chelonoidis abingdonii (Abingdon island giant tortoise): 116815357
Help
Entry
116815357 CDS
T07367
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116815357 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116815357 (VPS8)
Membrane trafficking [BR:
cabi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116815357 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
TPR_Vps41
zf-RING_11
Clathrin
zf_RING_Vps8_fungal
zf-RING_2
ANAPC4_WD40
zf-RING_UBOX
EIF3I
Motif
Other DBs
NCBI-GeneID:
116815357
NCBI-ProteinID:
XP_032619513
Ensembl:
ENSCABG00000015857
LinkDB
All DBs
Position
Unknown
AA seq
1407 aa
AA seq
DB search
MEPESLGAEQGASLPGPAEELGALLGQDAALLPLSGGELDRELESKSDLIDDKEFDIPQV
DTPPTLESILNETDDEEESFVLEDPSLLNIDNIDTHSYDTSSLASSDSGDRTHLKRKKKL
PDFFSLHGSVVRLSLLKGISAQIVSAADKVDAGLPTAIAASSLIAVGTSHGLALIFGKDP
NQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLANGKLLRSITDAHP
PGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLH
AKTELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAIQ
NSVNPMLAFCRGDVVHFLLVKRDDSGAIHVTKQKQLHLRYDLINFTWINSRTVVLLDSVE
KLHVIDRQTQEELETIEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSCGG
QIFYLGTKSVHVMMIRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDVSKRK
AVIADRMVEILFHYADRTLKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRTDLLFSQIY
DKLSENSVAKGVFLECLEPYILSDKLMGMTAQVMKDLLLHYQDKNLMEDMEACIVHMDIT
SLDIQQVVHLCWENHLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEKVVMG
NKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASADEEVYPYVRTLLH
FDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQL
AKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGVVQFEENRLIPMAEK
AEFYQICEFMYEREHLYDKIIDCYLRDPVRKEEVFNYIHNILSIPGYSAKEKQSVWQKAM
KHIEELLLLSPNKAADLIATHFNDQIEGIIKNLQDQFLLFQFLRSLLDPREGINQDMLQI
SPCVTEKFIELLCHYSPDQVLETLQVLEFYRLEETIQITQKHLLHEASSYLLEKKGDIHG
AFLVMLEQLRSKLLMLTREIEESTELDLLKDIEDTLVKTIALCQRNSHSLNQQQREALWF
PLLEALMSPQKLSSSTVLCQYSEPLKSLTMQVLNNMAAFIALPSILQRILQDPVYGRGKL
GEIQGLVLGMLDTFNYEQTLLETTTNLLNHDLHWSLCNLRASITRGLNPKQDYCCICLQQ
YKRRQEMAGEIIVFSCGHLYHSLCLLSKECGIETKGQMRWTCYKCNSSNKGGKLSENFSE
LKKGNGASLAQSSSESLLDSQQIQAFDQLCRLYRGTSRLALLTELSRTHGGEKHGLLNVS
QGDPALNSVFQNENFQLHLAPPPLTEE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgagagcctcggcgcggaacagggcgcctctctcccggggcccgccgaggag
ctaggggcgctgctagggcaggatgccgcgctgctgccgctgagcggtggggagctggac
cgggagctggagtctaaaagtgacctgatagatgacaaagagtttgatattccccaggtt
gatacccctccaacactggaaagcatattaaatgagactgatgatgaagaggagtctttt
gttcttgaggatccctctcttttaaacattgataatattgacactcactcgtatgacaca
tcttccttggcaagctcagacagtggggacaggacacacttgaaaagaaagaaaaaactt
cctgattttttctctcttcatggatcggttgtccgtctttctcttctgaaaggaatttct
gcccaaatagtatctgctgcagacaaagtggatgctggtttacctactgcaatagcagcg
tcaagtctgatagcagtggggacatcccatggtttagcattaatttttggaaaagatcca
aaccaggctcttcggctttgtctgggcagcactgctgttggggctcagtatggggctatc
tcggctctcagtatcaacaatgactgttcaagactactgtgtggctttgcaaaaggacag
atcaccatgtgggatctggctaatgggaaacttttaagatcgataacagatgctcatcct
ccaggaacagcaattttacatatcaagtttacagatgacccaacgcttgcaatttgcaac
gacagtggaggctccgtgtttgagctgtcatttaagagagttatgggtgtgagaacatgt
gagtctcgatgtctgttcagtggttccaagggagaagtttgctgtattgagcccttgcat
gcaaagactgaattgagagatcatcctatcacccagtactccctactagcaatggcttcc
ctaactaagattctagtcattggcttgaaaccgtctttgaaggtgtggatgacttttccc
tatggtcgtatggatccctctagtgtcccgctgttggcatggcattttgttgcaatacag
aactctgtgaatcccatgcttgccttctgtcgaggagatgttgttcattttcttttggtg
aagagagatgactcaggtgcaatacatgttactaagcaaaagcaacttcatctgcgctat
gacctcatcaattttacttggataaactcacgcacagtagtgcttctggacagtgtggag
aagctgcatgtgatagatcgccagactcaagaggagctggaaactatagagatttcggag
gtgcagctagtatataacagcagtcacttcaaatcactggccacaggaggcaatgtcagt
caagcattggccctggttggggagaaagcctgttaccaatccatcagcagctgtggtggt
caaatcttctatcttggcacaaagtctgttcatgtgatgatgataaggagctggagagag
agagtggatcaccttctgaaacaagactgtcttactgaggccctggctctagcgtggtct
tttcatgaaggaaaagcaaaggctgtagtaggattgtctggggatgtcagtaagcgaaag
gctgtcattgcagaccgaatggttgaaatcctcttccattatgctgatcgaactttgaag
aaatgtcctgaccagggaaaaatccaagttatggagcaacactttcaggatatggtgcct
gtcatagtcgattactgccttttacttcagcgaactgaccttctgttcagccagatatac
gacaaattgagtgagaactcagtggcaaagggtgtttttctggagtgcctggagccttac
attttaagtgataagttgatgggaatgacagctcaagtgatgaaagacttgctgcttcac
taccaagataagaacctaatggaggacatggaggcctgcattgtgcatatggatatcacc
agcctagacatacagcaggtagttcacctgtgctgggaaaatcatctgtatgatgccatg
atctatgtttacaacagtggaatgaatgacttcattagtccgatggagaaattgttcaaa
gtcattgctcctccacttaatgctgggaagtctctcacagatgagaaagtggttatgggg
aacaagctccttgtgtacataagttgctgtttagcaggccgtgcttatccattgggtgat
attcctgaagatctggtacccttggttaaaaaccaggtgtttgaatttcttatccgtctc
cactcagctgaagcatctgcagatgaagaagtctacccgtatgttcgtacgcttctgcac
tttgataccagagagttccttaacgttcttgcactgacttttgaagactttaagaatgac
aagcaagcagtggagtatcaacaaagaattgtggacatcctgctaaaggttatggtggaa
aattctgatttcaccccatcacaagttggctgtctttttacctttcttgcccggcagctg
gctaagcccaacaatacattgtttgtaaacaggaccctttttgaccaggtccttgaattt
ctgtgcagccctgatgacgattcccgacactcagagagacagcaggtccttttagaacta
ctgcaagctggaggggtagtacagtttgaagagaatcgtctcatccctatggcagaaaaa
gctgaattctaccaaatttgtgagtttatgtatgaacgggagcatctctatgacaaaatc
attgattgttacttgcgtgatccagtgagaaaggaagaagtgttcaactacatccacaat
atcctatccattcctgggtacagtgccaaggagaagcagtcagtgtggcagaaggctatg
aaacacattgaggagctgctattactgagcccgaataaagcagcagacctgatagccact
cacttcaatgatcagattgagggaatcattaaaaatcttcaggaccaatttttgcttttc
cagtttttgagaagtctccttgacccaagggaaggtatcaatcaggacatgctacagata
tctccctgtgtcactgaaaaattcattgagttgttgtgtcactacagtcctgaccaggtt
ttagagacactgcaggttctggagttctacagactggaagagaccattcagattacccag
aaacacctgctccatgaagcttcctcctacctgctggagaagaaaggagacattcatggt
gccttcctagtaatgcttgagcaactacgaagcaagttgttgatgcttacacgtgaaatt
gaagaatcaacagaactcgacttattaaaggatattgaagataccttagtgaaaacaatt
gcactttgccagaggaattcacatagtttaaaccagcagcagcgagaggcactctggttt
cctctcctggaggctttgatgtcgccacagaagctatccagttcaacagtgttgtgtcag
tattctgaacctctgaagagtttgacaatgcaagtgctaaacaacatggctgcatttatt
gcccttccctcaatcttgcagagaattctccaggatccagtttatggtagagggaaactt
ggagaaattcagggacttgtactggggatgctggacacatttaactatgagcaaaccctt
ctagagacaactactaacctcctgaaccacgatctccactggtccttgtgtaacttgaga
gcctccatcactagagggcttaacccaaagcaggattactgctgtatctgtctgcagcaa
tacaagagaaggcaagagatggctggtgaaatcattgtgttcagttgtggccatttgtac
cattcactctgtctgctgagtaaagagtgtggcatagaaaccaagggacagatgagatgg
acttgctataaatgcaactcaagtaacaaagggggaaaactgagtgagaatttctcagag
ctgaaaaagggaaatggtgcatctctggcacagtcaagttcagagtccctgttggattcc
cagcaaatccaggcttttgaccaactctgtcgactctatcgaggaacctccaggttagct
ctcctgacagaattatctcgaactcatggtggtgaaaaacatgggctcctcaatgtatct
cagggtgaccctgcactgaacagtgtcttccagaacgagaatttccagttgcatctcgct
ccccctccactgacagaagagtag
DBGET
integrated database retrieval system
