Chelonoidis abingdonii (Abingdon island giant tortoise): 116815382
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Entry
116815382 CDS
T07367
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabi03036
]
116815382 (CHD5)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116815382 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
116815382
NCBI-ProteinID:
XP_032619625
Ensembl:
ENSCABG00000018191
LinkDB
All DBs
Position
Unknown
AA seq
1993 aa
AA seq
DB search
MRGPAGAEGEPRDEMENEEELSEEEDGVLEGLEEFYAEEQVTAQKKKKSKKLKENKTSKV
KRRKKEGSNDEISENEEELEEKSESEGSDYSPNKKKKKKLKEKKEKKAKRKKKDEEEEDN
EEGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSK
MMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPQLSVSPQQSALPMAIRKAK
TKEGKGPGVRKKIKGSKDGKKKGKGKKMVGLKFRFGGIANKRKKGSSSEEEEREESDFDS
ASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPR
AYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEEEGGEEEEDDHMEFCRACK
DGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWVWREPPAP
FLSGLHPPDLELSVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQ
RKNDMDEPPAFDYGSGDEDSKSEKRKNKDPQYVKMEEKYYRYGIKPEWMMIHRILNHSFD
KKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYENLKQMYWNHRELMLGDDIQPPKRLNKKG
RKLKEEKLEKPPETPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTIL
ADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGD
KESRAVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWAC
LVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEG
FLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI
LTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSS
GKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGGLRQEAI
DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV
MIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD
DVEGMMSQGQRITMPDPMTPFPEALSSKGGAVTPSMKKKHGSTPPGDNKDVEDSSVIHYD
DAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPD
YWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSED
EDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMR
WGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQ
HVLTRIGVMSLVRKKVQEFEHVNGKYSTADLIPEGPEGKKSSEVVSSDPNTPVPASPAHM
QTGPAAQPDKTEIQLGFQEEKEQMEPKPKKPAESQGPASAEKAENEENQESSGNEEKPRE
EKQEEGEKAEPSPERLPVRDEAIQEKEKPLEKSELNACQGKGEDKEYKTEDTKVDEKEQS
ETQQNGEKEEEEDGKKEDKNMNFRFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHR
RHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQ
ALVIEEQLRRAAYLNMSQDPSHPAMALNARLTEVECLAESHQHLSKESLAGNKPANAVLH
KVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRGGDPTVQQGSFG
SSQLYNNNFGSNFRGPGPGGIVNYSQMPLGPYVTATPNGPPSSHPDKKVAESLKDGAALE
CKGKLGDIICIED
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccggcgggggccgagggggagccgcgggacgagatggagaacgaggaggag
ctgtcagaagaagaggatggagtgctggaagggctggaggaattttatgcagaggagcaa
gtaactgcgcagaagaaaaagaaatccaaaaagctgaaagaaaacaagacttccaaagtc
aagagaaggaagaaagagggaagcaatgatgaaatatctgaaaatgaagaggaattggag
gagaaatctgagagtgaaggaagtgactattcgcccaacaaaaagaagaagaagaagctc
aaagaaaagaaagagaaaaaagccaagcggaagaagaaagatgaagaggaggaggataat
gaggaaggaggtttaaaggagcccaagagctcagcgcagctaatggaggaatggggcctg
gatgatgtggattatattttctcggaagaagattaccatactctgactaattacaaggct
ttcagtcagtttctcaggcctctcattgccaagaagaatcccaaaatccccatgtcgaag
atgatgacggtgcttggtgccaaatggcgagaattcagcgccaacaacccgttcaaaggc
agctcggctgcagcagcagcggctgcagtggctgcagccgtggaaacagtcaccattgca
ccccagctttctgtcagccctcagcagtctgctctgcccatggccatcaggaaagcgaaa
accaaggagggcaaaggtccaggagtgcggaagaaaatcaagggctccaaagatgggaag
aaaaaggggaaagggaaaaagatggtgggcctgaaattccgctttggaggaatcgccaac
aaaaggaaaaaaggctcctcaagtgaagaggaggagcgggaggagtcggactttgacagc
gccagcatcaacagctcttcggtgcgctctgaatgctcggcgggcttggggaagagaggg
aagaggaggagaaagaaaaagaggattgaagaaggtgatggatatgagaccgaccaccaa
gattactgtgaagtctgccagcaaggaggggagattatcctgtgcgacacttgtcctcgc
gcctatcacctcgtctgcctggatcccgagctagagaaagcacccgagggcaagtggagc
tgccctcactgtgagaaggaagggatccagtgggagccaaaggaagaggaggaggaggag
gaggaggaagggggcgaagaggaggaggatgatcacatggagttttgccgtgcgtgtaag
gatggcggggagctgctgtgctgtgacacctgcccatcttcctaccacctgcattgtctg
aacccgcctctgccggaaataccaaatggtgaatggctctgccctcgctgtacatgccct
cccttaaaaggcaaagtccaacgcatcctgcactgggtctggagagagccccctgccccc
ttcctgtctgggctccatccgcctgacctggagctgtctgtccctccaccaaagcccctg
gaggggatcccggagcgggagttctttgtgaaatgggcagggctctcctactggcactgc
tcctgggtcaaggagctgcagctggagctctaccacaccgtgatgtaccgcaactaccaa
agaaagaacgacatggacgagcccccggccttcgactatggctctggggatgaggacagc
aaaagcgagaagcggaagaacaaagacccgcagtacgtcaagatggaggagaagtactat
cgctacggcatcaaacccgagtggatgatgattcaccgaatcctgaatcacagctttgat
aaaaagggagatgtccattacctgatcaagtggaaagatttaccctacgaccagtgtacc
tgggagattgatgacatagacatcccctactatgaaaacctgaaacagatgtactggaat
cacagggagctgatgttgggggatgatatccaacctccaaagaggctgaacaagaaaggg
agaaaactgaaggaagaaaaactagaaaaacctccagaaactcctattgttgatcctaca
gttaaatttgacaagcagccatggtatattgatgcaacaggcggcaccttacatccttac
cagctggagggactgaactggctgaggttctcctgggcccagggaactgatacgatcctt
gctgatgaaatggggcttgggaagacggtgcagaccatcgtgttcctatactccctgtac
aaagagggccactcgaaagggccgtatctggttagtgcccctctctccactattatcaac
tgggaacgagaatttgagatgtgggcacctgacttctatgttgtgacctacacgggggat
aaggaaagccgggctgtgatccgagaaaatgagttctcctttgaagacaatgccatccgg
agtgggaagaaggttttccgaatgaaaaaagaagcccagattaaattccacgtcctgctc
acatcctatgagctgatcactattgatcaggctgttttaggctctatagagtgggcgtgt
ctggtggtggatgaagctcacaggctgaagaacaaccaatccaaattctttagggtatta
aatagctacaagattgactacaagctgctgctgactggaacgccgctccagaacaactta
gaggagctcttccacctgctcaatttcctgaccccggagaggtttaacaacctggaagga
ttcctggaagagtttgctgacatctccaaggaggaccagataaaaaaactccatgatcta
ttgggtccccatatgctccggcgattgaaggcagatgtgttcaagaacatgcctgcaaaa
acagagctgattgtgagagtggagctcagccagatgcagaagaagtattacaagttcatc
ttgacaaggaattttgaagccctgaattccaaaggcggtgggaaccaggtgtcactgctc
aatatcatgatggatttgaagaagtgctgtaatcacccgtacctctttcctgtggctgct
gtggaggctccggttttgccaaatggatcctatgatgggaattctttggttaaatcttct
gggaaactgatgctgctgcaaaagatgctgaagaagctgcgagatgggggacacagggtc
ctgatcttctcccagatgacgaaaatgctggatttgctggaggatttcctggagcacgag
ggttacaagtacgagcggatagatggagggatcacgggaggcctgcgccaggaagccatc
gacaggtttaatgctcctggtgctcagcagttctgttttcttctctctacccgagctggg
ggtctgggcataaaccttgcaacggctgacaccgtcattatttatgattctgattggaat
ccccacaatgacatccaggcgtttagcagagctcaccgaatcggacagaacaagaaggtg
atgatctaccgctttgtgacgagagcctccgtggaggagcgcatcacccaagtggccaag
aggaagatgatgctgacccacttggtcgtccgtccagggctgggctccaagtcgggctcc
atgactaagcaagagctggacgacattctgaagtttgggacggaggagctcttcaaagat
gatgtggaaggcatgatgtcacagggccagcggatcaccatgcctgaccctatgactccc
tttcccgaagcactgtcatccaaagggggcgccgtcactccaagcatgaaaaagaaacat
ggcagcaccccgccaggggacaataaggacgtggaggacagcagtgtgatccactacgac
gacgctgccatctcgaagcttctggatcggaaccaggatgctactgatgatacggagctg
cagaacatgaacgagtatctcagctcctttaaagtggcccagtatgttgtgcgagaagag
gacggtgtggaggaggttgaacgagagatcatcaaacaggaggagaatgtggaccccgac
tactgggagaagctgctcaggcaccattatgagcagcagcaggaagatctggccaggaac
cttggcaaagggaagaggatccgcaaacaggtcaattacaatgatgcctcgcaagaggac
caagagtggcaggacgagctctctgataaccagtccgaatactccatcggctctgaggat
gaagatgaagactttgaagaaagacccgaaggtcagagtggcaggagacagtcacggagg
caactgaagagcgaccgagacaagcctctgccccctctgctggcaagagttggggggaac
attgaggtgcttggatttaatgcccggcagcgcaaggccttcctgaacgctatcatgcgg
tggggcatgccgccccaggacgcattcaactctcactggctggtccgagaccttcgcggg
aaaagtgagaaggagtttagggcttatgtctctttgttcatgagacatttatgtgagcct
ggagccgatggtgccgaaacctttgcggatggtgttccccgagaagggctgtcgcgccag
catgtgctgacgaggataggagttatgtcactagtaaggaagaaggttcaggagtttgaa
catgtcaatgggaagtacagcaccgctgatctgatcccggaggggccggagggcaagaaa
tccagtgaggttgtctcttctgatccaaacacccctgtcccagccagcccagcacatatg
cagactgggccagcagcacagccagacaaaacagaaatacagttggggttccaagaggaa
aaggaacaaatggagccaaagcccaagaagccagctgagagccagggtccagcaagtgca
gagaaagccgagaatgaagaaaaccaagagagctctggaaatgaggagaaaccgagagaa
gaaaaacaagaagagggtgaaaaggctgagccttcgcctgagcggctgccggtgagagat
gaggcaattcaggaaaaagaaaagccattggaaaagtcagaattaaatgcctgccaaggt
aaaggagaagataaagagtacaagacagaggataccaaggtggatgagaaggagcagagt
gagactcagcaaaatggtgaaaaagaagaagaggaggatgggaagaaggaggataaaaat
atgaactttagattcatgttcaacattgctgatggtggctttacagagttgcacacgttg
tggcagaacgaggagagagctgccgtctcctcaggcaagatctatgacatctggcaccgg
agacatgactactggctgctggctggaattgttacccatggctatgcccgctggcaggac
atccagaacgacccacgctatgtgattctgaatgagccgttcaagtcagagatacacaag
gggaactacctcgagatgaagaacaagttcctcgcccgacggttcaagttgctcgagcag
gccctggtgatagaggagcagctgcgaagggccgcatacctcaacatgagccaggacccc
agtcacccggccatggcactgaatgcccgtctgactgaagtggagtgccttgccgaaagc
caccagcatctctccaaagagtccctggctgggaacaagcctgccaatgctgtcctgcac
aaagttctgaaccagctcgaggagctgctgagtgacatgaaggcggatgtgacccgcttg
ccgtccatgctgtccaggataccaccagtcgccgcgcgcctgcagatgtcggaacggagc
atactgagtcgtctcactaaccgaggaggggaccccacagtccagcagggctcctttggg
tcctcccagctctataataacaacttcgggtcaaacttccgaggtcctggaccaggtggg
attgtcaactacagtcagatgccgctgggaccttacgtgactgcaacacccaatgggcca
ccctccagccaccctgataaaaaagtagcagagtcactgaaagatggtgcagccttggaa
tgcaaggggaagctcggtgacatcatctgcattgaagactaa
DBGET
integrated database retrieval system
