Chelonoidis abingdonii (Abingdon island giant tortoise): 116815744
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Entry
116815744 CDS
T07367
Symbol
SPG11
Name
(RefSeq) spatacsin isoform X1
KO
K19026
spatacsin
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116815744 (SPG11)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116815744 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
S6PP_C
LNS2_PITM1-3
Motif
Other DBs
NCBI-GeneID:
116815744
NCBI-ProteinID:
XP_032620244
Ensembl:
ENSCABG00000007257
UniProt:
A0A8C0GJS6
LinkDB
All DBs
Position
Unknown
AA seq
2434 aa
AA seq
DB search
MEGAKGALRVLLVPLAREARSPQADTAQAKLNRAQDALGSLLVSRGLHLRSLACGRAGRA
CGSPIPGPWADFMWEDAENNDPQGNKPKLLALSKNNDLFVYELNREDGKSDTTALYSWNE
KRLKKLLEVKNISLSSITSVRILSFKKNTSLLLLNNFILVHLDFPGEDTELQALDCFILD
LSPQALERITDVNFCRGVLFLLDNSGWIYIFDTVDGVRLADVDVALFQANVEDENKDTTI
LSPLTLVKVSHDLNVAVVVNSSNCAISIDLNLYFREFPGHLFCKKIFQNLPVTRLEGIDE
DDLASSDCSMKLTRFSFRTDRSWKAHLSSLYNTSKRPDSPNLVPNICFPWYQYLPHLEHY
DNKICDKSEKILSSIPQDIAYILSKSTRKDYANINDVGRQWKKIRPGGLEETMKLECKSV
TGFSALFALSAGDKGLTVALWDLETQDVTYYHIGKNCIYVDCSGEEQLCVIQTEHGLSLI
LFGLTQEEFLNRLIIHGSAGIVDSLCHLNGWGRCSIPIHALEAGLENRQLDTVDFFLKSK
ENLFNLTSACSLPEQSTNITPQFYLKSVEELKPALDLLCSAIRENDLEAQSKHFSEQLLN
LTLAFLNKQIREIFIHTEELDECFQKCVDILTTYIIELRTFMIKFPRKQRNLIDIRCDLD
EDIPRIEQSQMWETLTPEQVIFEAILNNRIPEAQTFFRVNQNPAQSLQELIQIGFELVYD
SLLKGNVKEASELIRNMGFDVKEQLHKICFYTIDKNIRNLLVKVLQEENYFSEKEKTVID
FVHQVENLYSGSFQDSEEIQPLSSFRNWKKEQDLSSHTAVLDTFLTCDKPQNHNREHRIM
LNWGQWWDQHIQEMILLPKRSHKEFKSCNPEVLWMYLTSQHDWLNICSWIEESQPHSHTS
FQQANWPSITADIIDQNTLCSSYMRNEILDKLARNGIFVSSEQEDFELLLLRLIHIGGVM
QNPHPVSKYNTASGLDFHSHFILYCLERSLQHLLYTYLDYYSLTPSNCPILDKKDLHEAH
PWFEFLVQCRGVASNPRDPKMMFQASLANAQILIPSNQASVSSMLLEGHTLLALATIMCA
PGGIDEVLQNEDTEKPLKKVDPQLLKMALTPYPKLKAALFPQNTSHGILPPDISLYHLMQ
SLAPFDPTKLFGWQSSNTLAIADISSDLPHFSSPDLVNKYAIMERLDFSYYLHHGRPSFG
FGTFLVQQLAKSKSPKQLIQQAGNEAYALALSFFYIPSIGAACICFLELLGLDNLKLRVD
IKVANIIWNFKSRNEDSQQNLIRESLVEKLTKLVDGEKTAAAEVLISLEEAFWDKIEHQE
IKKTSSDSRRQWSLVMQFCKLHDIKLSTSYLKECARSNDWLQFIIQTQMYSYQIDEVISI
LQDFTPILQDHLMLAFENLQRSRCGMGNHHINHTSSLKTEHRQNEHTSDLFQILLCCQER
PNPGCYLLAEGVRHHAPFLSVLAACFQDASIIHCLCVWIITSVDNVTAAEATNHIQGSVE
NHKWDLHDLSTIWKMFLRRQKSKTLMNGFQLFLKDSPLLHMLEMYELCMDYKKYNEAKTK
LHNFQTSLANLKIADKPTPSVISVPWLESQAFFLLELMMQQCRTQYELGKLLQLFADIDK
LLPDGPDVKKLCALSQILKDSSISINRSILTSYDTEHFQNECRSILEQLQERGLFSLARK
VAELAELPVNSVVIQEVLQDLHLLKHIGQWHQKQTRIDFWKKCHDNFMKNFISNKAASDF
FLAQANIVSESSADEKVNNIMEKHLLLTLAGHWLAQSDSVALDKLEEIEKQIWLCCIAQQ
TLNRDDGLVKSRFSHQVSVSGELSFDNLAKEFSFSKLTALNTSKYLQLDGLAFQDMSENM
LGKAEVESLSFLIGRLLDEGSIHEASRVCRYFHFYSRDVSLVLHCRALASGEAGLNNLHP
DVRAILLLGDTADERDTPQPRRLQSTSSIENWSHVLAPSPDDLVITSLRTLIDECAHGRN
YCRQVLCLYELSKELNCSYGEISAHDSEKVLRAILSSQQPDRCKKAQVFITTQGLRSETV
AELVAEEIMQELLVSSERKGQKQIVNPANETQAFLELAKLCKDHTLVGMKLLDKISSVPH
GELSCTTELLILAHNCFSLTCHMEGIIQVLQTARLLTEEHLAPSEEYGLVVRLLTGIGRY
NEMTYIFDLLHEKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCR
EIGENHEAAACIQLKLIESQPWEESLRDVPNLKKLLMKALTLFIDAAESYSKDSCVRQSL
RCNRLTKLITLQLHFLNTNQSMMLINLNRQNLMDCIMSLPRFYQAAIVAEAYDFVPDWAE
VLYQQVIIKGDFNYLEEFKQQRLLKSNVFEEIAKKVKQHQPTETAQKNLKTLLTYCEDIY
MYYKLAYDNKFYDVVNMLLKDAQTGCCLKDMLAN
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgcgaagggggcgctgcgggtgctgctggtgcccctcgcccgggaggcccgg
agcccccaggcggacactgcccaggccaagctcaacagggcgcaggacgctctgggaagc
ctgctggtctcgcgggggctccacctcaggtccctggcttgtggcagggctggccgggcc
tgcggcagccccatcccgggaccatgggcggacttcatgtgggaggatgcagaaaataat
gatccacaaggaaacaagccaaaactcctggctcttagtaaaaacaatgacctgtttgtc
tatgagctcaatagagaggatggaaaatctgacacaactgccttgtacagctggaatgaa
aagagacttaaaaaacttctggaagttaaaaatattagtctttcttcaataacgtctgtg
aggattctgtcatttaaaaagaacacatctttgctactgttgaataactttattcttgtg
caccttgattttcctggagaagatacagaattacaggcacttgactgctttatccttgat
ttgtctccacaagctttggaaagaataacagatgtgaacttttgtagaggggttctattt
ttgttagataactctggctggatatacatatttgatacagtagatggtgtgcgtctagca
gatgttgacgttgcactcttccaagcaaatgtggaggatgagaacaaggatacaaccatc
ttatctcccctcactttggtaaaggtgtcgcacgatctcaacgtcgccgtggttgttaat
tcctctaattgtgccatttctattgatctaaatttgtatttcagagaattccctgggcat
ttattttgtaagaaaatttttcaaaatcttcctgtaacacgactggaaggaattgatgag
gatgatcttgctagctctgactgcagcatgaaacttacaaggttttctttccggacagac
aggtcatggaaagcacacttgtcctcgctatataacacatcaaagagacctgactctcca
aacttggtgcctaatatttgctttccttggtaccagtaccttccccatcttgaacattat
gataataaaatctgtgacaaatctgagaagatcttgtcctccataccacaagacattgcc
tatatcctttccaaatcaacaaggaaagattatgcaaatatcaatgatgtaggaagacaa
tggaaaaaaatccgtccgggaggcctagaagaaacgatgaaacttgagtgtaaatctgtg
acaggatttagtgcactgtttgcattatcagcaggtgacaaaggattgactgttgctctg
tgggacttagagacgcaagatgtgacatattatcacattggcaaaaattgtatttatgtg
gattgcagtggagaggagcagttgtgtgtcattcagacagagcatggactgtccttgatt
ctgtttggtttaactcaagaggaattcttgaatagactgataatccatggaagtgctggc
attgtagattccctttgtcatctcaatgggtggggaagatgttcgattcccatacatgcg
ttagaggctggtttggagaaccgtcagctagacacagtagacttctttttaaagagcaaa
gagaatcttttcaatcttacttcagcctgctccttaccagagcaatctaccaatatcaca
ccccaattttacttgaaaagtgtggaagaattgaagccagctttagatttactttgctca
gcaatcagagaaaatgatttggaagctcagagtaaacacttctctgagcagctgctaaac
cttaccttggctttccttaacaaacaaatcagagagatttttatccacacagaagaactc
gatgagtgtttccagaaatgtgtggatattttaactacctacattattgaacttagaaca
tttatgataaagtttcctcgaaagcagagaaatctcatagatataagatgtgatcttgat
gaagacattcccagaatagaacaaagccaaatgtgggaaactctcactccggagcaagtt
atttttgaggccattttaaacaacagaataccagaggctcagacattcttccgagtgaat
cagaaccctgcacagagtcttcaagaactgattcaaataggttttgaacttgtttatgac
agtcttctaaagggtaatgtcaaagaggcctcagaactcataaggaatatgggttttgat
gtgaaagagcagttgcacaagatatgtttctacactattgataaaaacatacgtaacttg
ttggtgaaagtgttgcaagaagaaaactatttttctgaaaaagagaagacagtgatagac
tttgtgcatcaggttgaaaacttgtattcaggatccttccaagacagtgaagagatacag
cctctttcaagtttcaggaattggaaaaaagaacaagatctgtccagtcacacagctgtt
ttggatacattcttgacctgtgacaaacctcagaatcacaacagagagcacagaattatg
ttaaactggggtcagtggtgggatcagcatattcaggaaatgattcttcttcccaaaaga
tcacataaagaattcaagtcctgtaatcctgaggttctttggatgtatctgacatcccag
catgattggcttaacatttgctcatggattgaagaatcccagccacatagtcatacctca
tttcaacaggctaactggccttctattacagctgatattattgaccaaaatacattatgc
agcagctatatgagaaatgaaatattagacaagttggctagaaatggaatttttgtctca
tctgaacaagaagactttgaactcctcctcctaagactgatccacattggaggagtgatg
caaaatccacatcctgtttcgaaatacaatactgcgagtggtttggatttccattcccat
ttcatcctttattgtttagaacgtagtctgcagcatctgctatacacatatttagactat
tacagtttaactccttcaaattgtcctattttggataaaaaggatttgcatgaggctcac
ccctggtttgaatttctagtgcaatgtcgaggggttgccagtaacccaagagatccaaag
atgatgtttcaagctagtcttgcaaatgctcagatcttgattcctagtaatcaagctagc
gtgagcagcatgctgttggaaggacatacacttttagcacttgcaaccataatgtgtgca
cctggcggtatagatgaggttcttcagaatgaagatactgaaaagcctctgaagaaggtg
gatccacagctgttaaaaatggcattgactccttaccccaaactcaaagctgctctcttt
ccgcagaacacttcacatggaattttgccacctgatatctcactctaccatcttatgcag
tcattagcgccttttgatcccactaaattatttggctggcagtcgtcaaatactcttgcc
atagcagacatctcaagtgacctccctcatttctcgtcccctgatttggtaaacaaatat
gccataatggaacgactggatttttcctactacttgcaccatggacgcccatcatttggt
tttggtacctttttggtccagcaattagcaaagagcaaatccccaaagcagctgattcag
caagcagggaatgaagcctacgctctagctctttctttcttttatataccttcaatagga
gcagcatgtatttgttttctagagttacttggtcttgacaaccttaaacttcgggttgat
attaaagttgcaaatataatttggaacttcaagtctagaaatgaagattctcaacagaat
ttaataagagaatccttggttgaaaagctaacaaaattggtggatggcgaaaaaacagca
gcagcagaagtgcttatctccttggaagaagctttttgggataaaatcgaacatcaagaa
ataaagaaaacatccagtgactctagaagacagtggtctttggtgatgcagttctgtaag
ctccatgatatcaaactgagtacatcttacctaaaggaatgtgctagatccaatgactgg
ctgcagttcatcatccagacccagatgtacagctaccaaatagatgaggtcatttccatt
cttcaagatttcactcccattttgcaagatcatttgatgctggcctttgagaacttgcag
cgctctcgctgtggtatggggaatcatcacatcaaccacaccagttcactcaagactgaa
cacaggcagaacgaacatacaagtgatctctttcaaattctgttgtgctgtcaagaaagg
cctaaccctgggtgctaccttttggctgaaggagtgaggcaccatgctcccttcttgagt
gtcttagcagcctgttttcaggatgccagcattattcactgtctctgtgtttggatcatt
acttctgtggataatgttactgctgctgaagcaacaaaccatattcaaggctcagtagaa
aatcataaatgggatcttcatgacctttctaccatctggaagatgtttttaagaagacaa
aaaagtaaaactctcatgaatggtttccagctctttcttaaggattcgcctttattacat
atgctggagatgtatgaactgtgcatggactacaaaaaatacaatgaagccaaaaccaaa
ctccacaacttccagacaagtcttgcaaatcttaaaattgcagataagccaacaccttca
gtaatatcagtgccatggctggagtcacaggccttctttcttcttgaattgatgatgcag
caatgtagaacacagtatgaattaggaaaactcttacagctctttgcagatatagataaa
cttctacctgatggcccagatgtgaagaaactatgtgcactcagtcagattttgaaggat
tcatctatatctattaatcgctctatcctgaccagttatgacacagaacattttcagaat
gaatgcaggtcaattctagaacagctgcaagagagaggattgttctcactggcgaggaag
gttgctgaattagctgaactgcctgtgaacagtgtggttatccaagaggtacttcaagat
ttacatcttttaaagcacattggacagtggcatcaaaaacaaactagaattgacttctgg
aaaaaatgtcatgataattttatgaaaaatttcatctccaacaaagcagcatctgacttt
ttcttagctcaggcaaacatagtgtctgagtcttcagctgatgagaaggtaaataacatt
atggagaaacatctgctgcttaccttggctggccattggctggcacagagtgactctgtg
gcactggacaaattagaagaaatagagaaacagatctggctttgttgcattgcacaacaa
accttaaatagagatgatggattggtcaagtcaagattttctcaccaggtttcagtgagt
ggtgaactttcctttgataacttagctaaggagttttccttttcaaaactaactgctctg
aatacatcaaaatatttacaacttgatggccttgcattccaagatatgtctgaaaacatg
ttgggtaaagctgaggtagaatcgcttagctttctgattggtcgtcttctagatgaagga
agcatacatgaagccagccgtgtttgccggtattttcacttttatagcagagatgtttca
ttggtattgcactgcagagcattggcctctggggaagctggtctaaacaatttacaccca
gacgttcgcgctattcttctactgggagatacagcagatgagagagacacacctcagccc
agaagattacaaagcacctcaagcatagaaaattggtcacatgtcctggctccatctcca
gatgatctggttattaccagtctgaggactctaatagatgagtgtgctcatgggaggaac
tactgcagacaagtcctctgtttgtatgagctttccaaggaactgaattgctcctacggt
gaaatatcagcccatgattctgaaaaggtgcttcgagcgatcctttcatcccagcagcct
gacagatgcaagaaagcccaggtgttcatcacaacacagggtctccggtctgaaactgtg
gcagaacttgtggctgaagaaatcatgcaggagttactggtatcttctgaaaggaaaggg
caaaagcagattgtgaacccagctaatgagactcaagcattcctagagttggccaaattg
tgcaaggatcatacactggttggcatgaagttattggataaaatttcatctgtacctcat
ggggaactatcttgcactacagagctgctgattttggcccataattgctttagtctgaca
tgtcacatggaaggaattattcaagtcctgcaaactgctcgacttctcacggaggaacac
ttggcccccagtgaggagtacggccttgtggtccgactccttactggtattggaagatat
aatgaaatgacgtacatatttgatctgctgcatgagaaacattactttgaagtgctcatg
agaaaaaagttagacccgagtggaactctgaagacagctctgctagattacataaagcgc
tgtcggccaggggacagtgaaaagcacaatatgatagccctgtgctttagcatgtgtcga
gaaattggagagaatcatgaggcagctgcttgtatacagcttaagctcattgaatctcaa
ccatgggaagagtctctcagagatgtgcccaacttaaagaaactgttgatgaaagctctg
acactctttattgatgcagccgaaagttattctaaggattcctgtgtccgccagtccttg
cgctgcaaccggttgacaaagctgataactctccagcttcattttctgaacaccaatcag
agcatgatgttgattaacctgaacagacagaacctgatggattgcatcatgtccttgccc
agattctaccaggctgctatcgtggctgaggcttatgactttgttccagactgggctgaa
gttctgtatcaacaagtgattataaagggtgacttcaactacctggaagaatttaagcaa
caaaggttactcaaatctaacgtgtttgaggagattgcgaagaaggtcaaacagcaccag
cctactgagacggctcagaaaaatctgaagacgttactgacctactgtgaagacatctac
atgtactacaaactggcttatgataacaagttctatgatgtggtaaatatgcttttgaag
gacgcgcagactggctgttgtctaaaggatatgctggcaaattag
DBGET
integrated database retrieval system
