Chelonoidis abingdonii (Abingdon island giant tortoise): 116815771
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Entry
116815771 CDS
T07367
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X2
KO
K14296
nuclear pore complex protein Nup153
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03013
Nucleocytoplasmic transport
cabi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116815771 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116815771 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116815771 (NUP153)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116815771 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
116815771
NCBI-ProteinID:
XP_032620295
LinkDB
All DBs
Position
2:184599946..184667906
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AA seq
1465 aa
AA seq
DB search
MASGGGGGGSGGGKIRTRRYHLGASKPYPRNKQQGIISRVTESVKNIVPGWLQRYFNKNE
DECVDASEPTSQQETPVNYHHGYADDDTPVFDGRVTPESTRINLEEPSTSRSALNFSDVL
TRPSLHRSHLNCTMLDSPSPHCEPSTSSAFAIGSSGLSLVKEIKDSTSQHDDDNISTTSG
FSSRASDKDIAVSKNTSVPPLWSTETERSHSLTQHSATSSKKPAFNLSAFGALSPSLGNA
SVLKTSQLGDSPFYPGKTTYGGAAAAARQSKIRITPYQTPVRRQMKAKQANVQSYGVTSS
TARRILQSLEKMSSPLADAKRIPSSVASPLSSPVDRNMLDITRFHLKRKQVESQHPPVQK
LVTPKTISQSMSRLQYFKPSLTPAAESGKIRQRVDVKHKGVREKNLTAEQQVEPTESNFT
YPKFSTPASNGLYSGVGGGGGGKMRKERGVHYVSQPGQEKQEVEAPVLPKIPLPINTTSL
PNFSFGSLASTATVSSSPITNTQPVINKMQPASNASSPVFRFSSPIVKSTEAEVLPPLSI
GFTFSVPVVKSTQASGSSDTPVPLLISPGTTAVNSTSNKKKEKEEYDGAFKPAKVLKEGS
VLDLLKSPDFTSLKTHPPTATQPVSISTEVYTRPAISNFSAGSLGFKETSKQASSYWRCD
TCLLQNKATDNKCITCQAAKVPTADPAKQTGTLTLSSTVKSTAPATGTLGFGDKFKLAAG
TWDCDTCLVQNKPEATKCVACETPKPGTGVKPALTLPVVTENTITVTSSPSCTETTVTLG
FGDKFKKPKGSWDCTVCLVSNKAEDSKCVACQCERPGGSVPVTSSSTSSFSAPSGGFLGL
DKFKKPEGSWDCETCLVQNKAEATKCIACENAKPGTKPELKGFGTAAVSSDAAAPSFKFG
IQSSSSESSQTLGSTESFKFGEQGGLKFGITSESGSVTNMTGGFSFFKTSEDFKFGVSSS
DSKSEESKKDSKNNSFNFGLPSGTSNPSTSAFQFGTPSLGQQEKKEEPVLGGLSFGTSST
ASIATSENKTGVSGFSFGTVAEKEVAATPFLFKKSEEKKDETPSAKGGFTFGSLEPASAS
QFVLGRTEEKQDAVTSATSLVFRKTVDNEEPKAQPIFSFGKSEQTKEESTAKPPFSFNLT
KPEEKETEQTKPTFTFGAQTNTADQGAAKPAFGFLSSGSSSTAIPSTSANSTIVFGSSSS
ASNPPPVAAAFLFGQASNTVSSSAFGNASESNAPQSFGFSQENKPATTSSSTGAAVGSFL
FGSGTGSNNTATPGFNFGATTTSSSTGSSSSFVFGSGSSAPAAGPSQTPAFGASQMPTFG
QSQGASQPNAPTFGSLSSTSLFSAGSQPAPPAFGSVSSSSQPPVFGQQASQQPGFGSGTT
PNSGAVFQFGRSDTNFSFTSNSPGVFTFGGNPGAPAPPTQPSSSSGFPFNPTPAFTMGSN
GKNIFSASGSSVSGRKIKTAVRRRK
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcgggggaggcggtggcagtggaggggggaagatccggacccggcggtac
cacctgggcgcctcgaagccctacccgagaaacaagcagcagggaatcattagcagagtt
acagaatcagtgaagaatattgtaccaggatggttgcaaaggtacttcaataaaaatgaa
gatgaatgtgtagatgcaagcgaacctacaagccagcaggaaactccagtaaactaccat
cacggttatgcagatgatgataccccagtgtttgatgggagggtcactcctgagtcaaca
agaattaatttagaagaaccgtccacaagtagatctgcattaaacttctcagatgtatta
acaagaccctctcttcatcggagtcatttgaattgcaccatgttggattctccgtcacca
cattgtgagccctccacatcctctgcatttgcaattggcagttctggactctcccttgta
aaagaaatcaaagattctacctctcagcatgatgatgataacatctcaactactagtggc
ttctcctctagagcatctgataaagatatcgcagtttcaaaaaatacatccgtaccacct
ctctggtccacagagactgaacgatctcattctctcacacaacattctgctaccagctct
aaaaaacctgcattcaacttatctgcttttggagccttatccccttcacttggtaatgct
tctgtccttaagacaagccagcttggggattctccattttaccctggaaaaaccacttat
ggtggtgcagctgcagcagcaaggcaatctaaaatacgaattactccttatcagacacca
gtcagaagacaaatgaaagctaagcaagcaaatgtgcaatcctatggagtgacaagttcc
acagcgcggcgcatcttgcagtctctggagaagatgtcaagtcctttagcagatgctaaa
aggattccatcttctgttgcttctccactgtcttctcctgtggacaggaacatgctggat
attactcgcttccatttaaagagaaaacaggtggaatcccagcaccctccagtccagaaa
ttagtgacaccgaagacaatttctcagtcaatgagccggttacagtattttaaaccatct
ctgactccagctgctgagtcaggcaagattagacagagagtagatgtaaagcacaaagga
gtgagggagaagaatttgactgcagaacagcaagtagagccaactgaaagcaatttcaca
taccccaaattcagtacacctgcatccaatggattatattctggagtgggaggtggtgga
ggtggcaagatgagaaaggaaagaggagtacactatgtatctcaaccaggacaagaaaaa
caggaggtggaggcaccagtactacccaaaatacccttaccaattaatactacatcactg
cctaacttcagctttggctccctcgccagtactgctactgtgtcgtcatcaccaatcact
aatacacaaccggtgattaacaagatgcaaccagcaagtaatgctagcagtcctgtgttc
agattttcatctccaattgtaaaatctactgaggcagaagtgctacctccactgtctatt
gggtttacgtttagtgttcctgttgtgaaatcaacacaagcttctggatccagtgatact
ccagtgccacttctgattagcccaggtaccactgctgtaaatagcaccagcaataagaag
aaagaaaaggaagaatacgatggcgccttcaagcctgcaaaagtcttgaaagaagggagt
gtactggatcttctaaaaagccctgactttacttctctgaagacacacccccctacagcc
acacagcctgtttcaataagcacagaagtttatacacggcctgcaataagtaatttttct
gcaggttcattgggatttaaagagacctctaaacaagcttcatcatattggcgctgtgac
acatgtctcttacaaaacaaggcaacagacaacaagtgcataacctgtcaagctgctaaa
gtgccgacagcagatcctgctaaacagactggaacgttgactctaagcagcactgttaaa
tcaactgctcctgcaacaggaacactgggcttcggagacaaatttaaattagcagcagga
acatgggattgtgatacatgtctagtccagaataaacctgaagctacaaaatgtgtggcc
tgtgagacaccaaagcctggaactggagtaaagcctgctctgacattgccagtggtcaca
gaaaatacaataacagtgacttcctctcctagctgcactgaaactacagtcactttgggg
tttggagacaaattcaaaaaaccgaagggttcttgggactgtacagtgtgccttgtgtca
aataaggcggaagacagtaaatgtgtagcttgtcagtgtgagagaccagggggttcagtg
cctgtgactagtagcagcacatcctctttctctgctccttctggaggatttctgggatta
gacaaattcaagaaacctgagggaagctgggactgtgaaacatgcttggtacaaaacaaa
gcagaggccacaaagtgcatagcttgtgagaatgcaaaaccaggcaccaaacctgagctc
aaaggttttggaactgctgctgtgtcctcagatgctgctgcaccatcatttaaatttggt
attcagtcatcatcctctgagtcatctcagacattaggaagcacagaaagtttcaaattt
ggagaacaagggggtttgaagtttggtattacatcagagtcgggatctgtaacaaacatg
actgggggcttcagtttctttaaaacttcagaggacttcaaatttggagtctcttcctca
gactctaaatcagaggagagtaaaaaagacagtaagaataacagttttaactttggactt
ccctctggtacaagcaatccatctacttcagcatttcagtttgggacacccagtcttgga
cagcaggaaaagaaagaggaacctgttttagggggtttgagttttggcacaagttctact
gcttccatagctacatcggagaataaaacaggagtgagtggattcagttttggaacggtg
gcagaaaaggaagttgcagcaactccctttttatttaaaaagtcagaggagaaaaaagat
gaaactccttcagccaagggaggcttcacttttggcagcttggagcctgcatctgcctca
cagtttgtcttgggaaggacagaggagaaacaggacgctgttacctctgctacttcatta
gtgttcaggaagacagttgacaatgaggagccaaaggcgcaacccatcttttcatttggg
aagtctgagcagaccaaagaagagagcacagcaaaacccccattcagtttcaacttaaca
aaaccggaagagaaggaaacagagcaaacaaagccaacttttacatttggggcacaaacc
aacactgcagatcaaggggcagcaaagccagcctttggtttcttgagctccggttcctcc
agcacagccataccaagcacttcagctaacagcactattgtgtttggcagctcctcctct
gcctcaaatcctccgccagttgccgctgcctttttgtttggacaggccagcaacactgtg
agcagttctgcatttggcaatgcttccgaatccaatgccccgcagtcatttgggttctct
caagaaaacaaaccagcaaccacatcctccagcacaggtgcagctgttggttcatttctc
tttggttcaggaacaggcagtaacaatactgcaacccctggtttcaactttggggccaca
accacatcaagttctacaggttcttcctcttcatttgtgtttggctctgggtcttcagca
cctgctgctggtcccagccagacaccagcatttggtgccagccagatgccaacatttggt
caaagtcaaggtgccagccagccaaatgctccaacttttggatcattatcatcaacgtca
ttgttttcagctggctctcagcctgcacctccagcctttgggtctgtgtcaagcagtagt
cagcctcctgtgtttggacagcaggcaagccaacagcctggctttggctccggtacaaca
cctaattccggtgctgtattccagttcggacgtagtgatactaatttcagcttcacaagt
aatagcccaggagtatttacttttggtggaaatccgggtgcaccagcgccaccaacccag
ccttctagctcttcaggatttccatttaacccgactccagcatttacaatggggtctaac
gggaaaaatattttctctgcttctggatcttcagtttctgggcggaagataaagactgca
gttagacgtagaaaataa
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integrated database retrieval system
