Chelonoidis abingdonii (Abingdon island giant tortoise): 116816052
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Entry
116816052 CDS
T07367
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
116816052 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
116816052 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
LIM
Motif
Other DBs
NCBI-GeneID:
116816052
NCBI-ProteinID:
XP_032620873
LinkDB
All DBs
Position
Unknown
AA seq
1512 aa
AA seq
DB search
MRKETEDIESPKRNIRDSGYIDCWESERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPD
VVLRGSSDGRGSDSESDLPHRKIPDVKKDDMSARRTSYGEPKSVVPFNQYLPNKSNQTAY
VPAPLRKKKAEREEYRKSWSTATSPLGGEKPFSKNHPETIEEQNEAPRQHEEEQVGRMAS
RTNPSKSQVDLNQNKGKAIGQFPSGSAKETAVHKCKEKDAEEIRKLRRLEQAGIKVMPAA
QRYGSQKQIYEDSEPTPDIILHKEKPSMMHCQGKDSGSEDEAVCRVPDLEKDDFAARRAR
LNQPKLTVSFNQFLVGPCTNKDKGKLEGVKKPLQKEKQEYPRANQVHMASERQIVTRKEN
PFLQSQDNESEEEEQVKVPDIQRDDLAKRKTQSNLTQQQESPVFVKASITQADLETWDRL
KVSEQLSEEDLRCSKDPEPSSEIAVEAAVHDDFASRKARAYKKAFSPKQRFVHFGPVTET
DQQKWEKVSIARAISNSETTEETGRERAERQICHETFASARACSLTAIGHHNEVSRPQND
SSSLPLNCTMEQHHGTVSPVFVGCNVTRDESHEKLKDHDQSRGGTEHQVRIPDPRDDMMA
RRTGAFLKQPGPSVKQFLPVPFSKQQSSQERAKKLVKPGKKMKSTTTTGSFITEKCPQIC
ANSPQRLAVQPQHREEKEQDKQHLPDTGQDVAFSIHINSHSVDQIHSDQTSQLQEVPERN
KVVSSRDEQLQIFGPRTAVSDDAESVSMFDMRCEDEAVMQPHSKARHEKLQHIHNQLKED
ENRWQDDLARWKSRRRSASQDLIKKEAERKKMERLLSGGDGTSERRKSIKTYREIVEEKE
RREKELHEAYKNARSREEAESILQQYIERFTISEAVLEHLEMPKILERSHSVEPNSSSPP
KDPNPMRYLRQQSLPPPKYTATIEATIVPISESEATVSTGQTSPSKTVVSKAVPMLTPKP
YAQPKNTQQVLKTFKVDGKVSMNGETFNGLEEKDKECTTVIFAPLLRRSPKFEGVARVDG
SPVELKQDTTSIELSLKRPATHTVHRELTGSFTEDIKPANQKDETDSGRPEMMNSGFASP
AAEQKQFKTTVTCACPAVPSVEFPPSTHSEEAASKDKDLKKPETEQQKEAEVLVTEKVVK
SKAPEQEGSILFPFLKEVPETSQIILQNSDQQVDSDNSDKSNCFSFWSWDPEEERKRQER
WQHEQERLLQEKYQKEQNKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTVSSSSA
ELLSTSSSVTEGNGTMTMMELSNSHEEEKQKEIKRQEKLPWEQESASLAKNKKSEPCLEK
KSSVNKVPTEHPETILQRESEQDHQVSVMEHSSPVILNLPLTQDVSWSQQLLTKQSPHIS
EEVRQKTSLDQSTGQQDNSPGERRRTGYHENFRPKLSSPCSPTPQNHSPNRYQRSVSGKK
LCSACRLPLGKGAAMIIETLGLYFHIHCFRCGICKGQLGDAASGTDVRIRNGLLNCNDCY
IRSRTAGQPTTL
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggaaactgaagatattgagagccccaaacgcaacattcgtgacagtggttat
attgattgttgggaatctgaacgcagcgattccctttccccccctcgccacggcagagat
gattcatttgacagtctggattcatttggttcccgctcacagcagacaccgtctccagat
gtagtgctcagaggaagcagcgatgggagagggagtgactcggagtctgacttgccgcac
cgaaagataccagatgtgaaaaaagatgatatgtctgcaaggcggacgtcgtatggcgaa
cctaaatcagttgtgccttttaaccagtatctcccaaacaagagtaaccagactgcctat
gtaccagctcctcttcggaaaaagaaagctgaacgagaggagtaccggaagagctggagt
actgctacttcaccacttggaggagagaagcctttcagcaaaaaccatccagaaaccata
gaagaacaaaatgaggcaccaagacaacatgaagaggagcaggtgggacgcatggcttcc
aggacaaatcccagtaaaagtcaagtagatttgaatcagaacaaaggaaaggctataggt
cagtttccttcaggtagtgccaaagaaactgcagtgcacaagtgcaaagagaaggatgca
gaggaaatcagaaagttaagaaggcttgaacaagctggtattaaggtcatgccagctgca
caacgctatggcagtcaaaagcaaatatatgaagatagtgagcctaccccagacatcatt
cttcacaaggagaaaccctctatgatgcattgtcaagggaaggattctggatcagaagat
gaagcagtgtgcagagttcccgatctagaaaaggatgactttgcagcccggagagcaaga
ctgaatcagcccaaacttacggtgtcatttaaccagtttttagttgggccctgtacaaat
aaagataaaggtaaactggaaggtgttaaaaagccattacagaaggaaaaacaggaatat
cccagagcaaaccaggtacatatggcatcagaaaggcaaattgtgacccgtaaagaaaac
ccattcctgcagtctcaggataacgagtcggaggaggaagagcaggtgaaagtgcctgat
attcaaagagatgacctggctaaacgaaagactcaaagtaaccttacccagcaacaagag
tctccagtgtttgtgaaagcttctataacgcaagcagatttggagacgtgggacagactg
aaagtgtccgagcagctcagtgaagaagacctcagatgctctaaggatcctgaaccatcc
tctgaaattgcagtggaagcagctgttcatgatgattttgctagccgcaaagcaagagca
tacaaaaaggcttttagcccaaagcagaggtttgtgcactttgggccagtgactgagact
gatcaacagaaatgggagaaggttagtattgccagggccatatccaacagtgaaaccaca
gaggagactgggagggaaagagctgagagacagatttgccatgaaacctttgcgtctgcc
cgtgcctgcagccttactgccattggacatcataatgaagtctccagaccacaaaatgat
tccagcagtttgcccttgaattgcacaatggaacaacatcatggaacagtttcaccagtc
ttcgtgggctgtaatgtgacaagggacgagagccatgagaaactgaaagatcatgaccag
agtaggggtgggacagaacaccaagtgagaattccagatccaagagatgacatgatggca
agaagaactggagcttttctaaagcagcctggaccgagtgttaaacagttcctcccagtt
cctttttcaaagcagcagagtagccaggagagagctaagaaacttgtaaagcctggaaag
aaaatgaagagcactaccaccactggctcattcatcactgaaaaatgtccacaaatctgt
gctaacagtcctcagagactggcagtgcagcctcaacacagagaagaaaaagaacaagac
aaacaacatctccctgatacaggacaagatgtggcgttctctattcacataaatagtcat
agtgttgatcaaattcactcagatcaaacttcacagcttcaggaagtacctgagagaaac
aaagtggtgtcatccagagacgaacaactgcaaatattcggccccagaactgctgtgtct
gatgacgcagagagtgtgagtatgtttgacatgaggtgtgaagatgaagctgtgatgcag
cctcacagcaaggctcgccatgaaaaactacagcatattcacaaccaactgaaagaggat
gagaatagatggcaagatgatctggcacggtggaaaagtcggagaagaagcgcttcgcag
gacctaattaaaaaagaagcagagagaaagaagatggaaaggttattgagtggtggtgat
ggaacaagtgagcgaaggaaaagtatcaagacttacagagaaattgtggaggagaaagag
agaagagaaaaggagctgcacgaagcctacaagaatgccaggtcacgtgaggaagcggag
agcattctccaacaatacattgaaaggttcaccattagcgaagctgtccttgaacattta
gagatgccaaaaattctggaaagaagccattcagtggagccaaattcatcatcaccaccg
aaggacccaaatcctatgagatacttacggcaacaatcgctgcctcctccaaaatacact
gccactattgaagcaaccattgttcccatcagtgaatcagaagccactgtttcaacaggc
caaacatctccaagcaaaactgttgtctccaaggctgtgcctatgctgacacccaagcct
tacgcacaacccaaaaacacgcaacaggtcttgaaaacatttaaggtagatggaaaagtc
agcatgaatggcgaaactttcaatggacttgaagagaaggataaagaatgtacaacagtg
atatttgctcctttactaagaagatctccaaagtttgaaggggtggccagagtggatgga
tccccggtggaactgaagcaggacaccactagcattgagctcagtttaaagaggcctgcc
actcacactgtgcacagagagctgacaggctccttcactgaagacattaaaccagccaac
caaaaagatgaaactgattctggaaggccagaaatgatgaattcggggtttgcttcacca
gctgcagaacagaaacaattcaagacaactgttacttgtgcctgccctgctgtgcccagc
gtggagttccctcctagcacccattctgaagaagcagcttcaaaagataaagatctgaag
aaacccgagacagaacaacagaaggaagcagaggtcctagttacagagaaggtagtgaag
tcaaaggctccagaacaagaagggagtatattatttccatttttgaaggaagtacctgag
accagccaaattattctgcagaactctgatcaacaagtggattctgataatagtgacaag
tcaaattgtttcagtttctggtcctgggatccagaagaggagcgaaagcgacaggaaaga
tggcagcatgaacaggaacgcttgcttcaggagaagtaccagaaggagcagaacaagctg
aaagaagaatgggaaaaagcacagaaagaagttgaagaggaggagcgtagatattatgag
gaggagcgcaagataattgaggatactgtagttccattcacggtttcttcaagctctgct
gaactcctctccacgtcttcctctgtcactgaaggaaatgggacaatgactatgatggaa
ctgagcaactctcatgaggaagagaaacaaaaggaaattaaaagacaggagaaattaccc
tgggagcaggagagtgcatcattagccaaaaacaagaaaagtgagccatgcctggaaaag
aaaagcagtgtaaataaagtgcccacagaacatccagagactattcttcagagggaaagt
gagcaggatcaccaggtgtcagtgatggagcacagctcaccagtcatattgaatctacca
ttgactcaggatgtgtcatggagtcagcagttgttaacgaaacagtcaccacacatttca
gaagaagttagacagaaaacgtctctggatcagagcacaggacagcaggataattcccca
ggtgaaagaagaaggacaggctatcatgagaatttcaggcctaagctgtcatctccatgt
tctcctacacctcaaaaccactcacccaacaggtatcaaaggtctgtcagtggaaagaaa
ctatgttctgcctgtcggcttcctcttggaaaaggagctgccatgattattgaaacactc
ggtctatattttcacattcattgcttcaggtgtggaatttgcaagggacagcttggagat
gcagcaagtggaactgatgtcaggattagaaatggtcttctcaactgcaatgattgttac
atcagatccagaactgctgggcagccaacaacattgtga
DBGET
integrated database retrieval system
