Chelonoidis abingdonii (Abingdon island giant tortoise): 116816117
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Entry
116816117 CDS
T07367
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116816117
Cell adhesion molecules [BR:
cabi04515
]
Cadherins
Protocadherins
116816117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
PLAC8
Motif
Other DBs
NCBI-GeneID:
116816117
NCBI-ProteinID:
XP_032621016
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MIVLFLLALLWMVEGALSQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARRFQTVPNSR
SPYLELNLETGVLYVNEKIDREQICKQNPPSCQLHLEVFLENPLELFRVEIEVLDINDNP
PSFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRTYEITPNSYFSLDVQTQGDGNR
FAELVLDKPLDREQQAVHRYVLTAVDGGQPQQRTGTALLTIRVLDSNDNVPAFEQPVYTV
SLPENSPPGTLVLQLNASDPDEGQNGEVIYSFSSHISARARELFGISPRTGRLEVSGELD
YEESSVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNPPEISFSTVKEAVSEAASPGTVV
ALFSVSDRDSEENGQVQCELLQSDAPFRLKSSFKNYYTIVTEGPLDREQPGGDAYTLTVV
ARDMGEPALSTSKSIQVRVSDVNDNAPRFSQPLYQVYVSENNVPGAYIYAVSATDRDQGA
NAQLAYSILESQIQGMSVFTYVSINAENGFLYALRSFDYEQLKEFSFQVEARDAGEEPQP
LAGNATVSIIVVDQNDNAPAIVSPLPGRNGTPAREVLPRSAEPGYLVSRVAAVDADDGEN
ARLTYSIARGNEASLFRMDWRTGELRTARKVPAKRDPQRPFELVIEVRDHGQPPLSSTAA
IQVVLVDSAVERQGGSGLGAGGGGGGEGREEHRPSRSGGETSLDLTLILIIALGSVSFIF
LLAMIVLAVRCQKEKKLNIYTCLASDCCLGSCCCCCPCCSRQARARKKKLSKSDIMLVQS
SNVPSNPAQVPVEESGSFGSHHHNQNYCYQVCLTPESAKTDLMFLKPCSPSRSTDTEHNP
CGAIVTGYTDQQPDIISNGSILSNETKHQRAELSYLVERPRRVNSSAFQEADIVSSKDSG
HGDSEQGDSDHDATNRGQSSGMDLFSNCTEECKALGHSDRCWMPSFVASDGRQAADYRSN
LHVPGMDSVPDTEVFETPEAQPGIERSFSTFGKEKALHNTLERKELDGLLTNTRAPYKPP
YLTRKRIC
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattcctccttgccttactctggatggtggagggagccctttctcagctt
cactacacggtgcaagaggagcaggagcatggcacgttcgtggggaatatcgccgaggac
ctgggcttggacattacaaaactttcggctcgccgctttcagacggtacccaactctcgg
agcccttacctagagctcaacctggagactggggtgctgtacgtgaatgagaagatcgac
cgggagcagatctgcaagcagaaccctccctcctgccagctgcacctggaggtctttttg
gagaaccccctcgagctgttccgggtggagatcgaggtgctggacatcaatgacaatccg
ccctccttcccggagcccgacctgacagtggagatctccgagagcgccacgccgggcacc
cgcttcccactggagagcgccttcgacccggacgtgggcaccaactcgctgcgcacctac
gagatcacccccaacagctacttctcgctggacgtgcagacccagggcgatggcaaccgc
ttcgccgagctggtcctggacaagcccctggaccgcgagcagcaggcggtgcaccgctac
gtgctgaccgcggtggacgggggccaaccccagcagcgcaccggcaccgccctgctcacc
atcagggtgctggactccaatgacaacgtgcccgccttcgagcagcccgtctacaccgtg
tccttgccagagaactcgccgccgggtaccctggtgctgcagctcaacgccagcgacccg
gacgagggccagaacggcgaggtcatctactctttcagcagccacatctcggcgcgggcc
cgggagctcttcggcatctcgccgcgcaccgggcggctggaggtgagcggcgagctggac
tacgaggagagcagcgtgtaccaggtgtacgtgcaagccaaggacctgggccccaacgcc
gtgcccgcccactgcaaggtgctggtgcgggtgctggacgccaacgacaacccacccgag
atcagcttctccaccgtcaaggaggcggtgagcgaggcggcctcgccgggcacggtggtg
gcgctgttcagcgtctcggaccgggactcggaggagaacgggcaggtgcagtgcgagctg
ctgcagagcgacgcgcccttccgcctcaagagctccttcaagaactactacaccatcgtc
accgaggggccgctggaccgcgagcagccgggcggcgacgcctacaccctcacggtggtg
gcgcgggacatgggcgagccggcgctgagcaccagcaagtccatccaggtgcgggtgagc
gacgtgaacgacaacgcgccgcgcttcagccagcccctctaccaggtctatgtgagcgag
aacaacgtgccgggcgcctacatctacgccgtgagcgccaccgaccgggaccagggcgcc
aacgcccagctcgcctactccatcctggagagccagatccagggcatgtccgtcttcacc
tacgtctccatcaacgccgagaacggcttcctctacgccctgcgctccttcgactacgag
cagctcaaggagttcagcttccaggtggaggcgcgcgacgcgggcgaggagccccagccc
ctggccggcaacgccaccgtcagcatcatcgtggtggaccagaacgacaacgcgcccgcc
atcgtcagccccttgcccggccgcaacggcaccccggcccgggaggtgctgccgcgcagc
gccgagcccggctacctggtgagccgagtggctgcggtggacgcggacgacggggagaac
gcgcgcctcacctacagcatcgcgcggggcaacgaggccagcctcttccgcatggactgg
cgcaccggggagctgcgcaccgcgcgcaaagtgccggccaagcgcgacccccagcgaccc
ttcgagctggtgatcgaggtgcgggaccacgggcagccgccgctctcctccaccgccgcc
atccaggtggtgctggtggacagcgctgtggagcgccagggaggcagcggcctgggtgcg
gggggcggcggcgggggtgaggggcgggaggagcatcgccccagccgctccgggggcgag
acctcgctggacctgaccctcatcctgatcatcgccctgggctccgtgtcgttcattttc
ctgctggccatgatcgtgctggccgtgcgctgccagaaggagaagaagctcaacatttac
acgtgcctggccagcgactgctgcctgggcagctgctgttgttgctgcccctgctgcagc
cgccaggcccgggcccgcaagaagaagctgagcaagtcggacatcatgctggtgcagagc
tccaacgtacccagtaacccggcccaggtccccgtggaggaatcgggcagcttcggatcc
caccatcacaaccagaactactgctaccaggtctgcctcactccggagtcagccaagacc
gacctgatgttcctaaagccctgcagcccatctcggagcactgacactgagcacaacccc
tgcggggccatagtgacaggttacacggaccagcagccagacatcatctccaatggcagc
atattgtccaacgagacaaaacatcagcgtgcagaactcagttatctagttgagagaccc
cgtcgggtaaatagttctgcattccaggaagcagacatagtaagctctaaggacagtggt
catggagacagcgagcaaggagacagtgatcatgatgccactaatcgaggtcaatcctct
ggcatggatctcttctccaattgcacagaggaatgtaaagcactgggacattcggatcgg
tgctggatgccctcctttgtcgcatccgatggacgccaagctgcagattatcgcagcaat
ctacatgtgcccggtatggactctgttccagacactgaagtgtttgaaacaccggaagcc
cagcctgggatagagaggtccttttccaccttcggcaaggagaaggcccttcacaatact
ctggagaggaaggagttggatggactgctgactaatacacgagcgccttacaaaccacca
tatttgacgcggaaaaggatatgctag
DBGET
integrated database retrieval system
