Chelonoidis abingdonii (Abingdon island giant tortoise): 116816235
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Entry
116816235 CDS
T07367
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116816235 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116816235 (PAN3)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116816235 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
116816235 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
116816235
NCBI-ProteinID:
XP_032621188
Ensembl:
ENSCABG00000001412
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MMQRMTNSSSSPSLLNDSAKQYAGHDPLTSPASSLFNDFAALSLSQRRKPRKYRLGMLEE
RIVPVGSKARKSKNAIGCLADRCKTGVPINMVWWNRVTENNFQTPNPTASEFIPKGGSTS
RLNNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRR
SHTPNPANYMVPTSASTPVTNAVSQPPSTGQVIQKETVGGTTYFYTDTTPAPLTGMVFPS
YHIYPPTAPHVAYMQPKANAPSFFMTDELRQELINRHLITMAQIDQADIPAVPTEVDSYH
SLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMW
KKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSADAYFTKRKWGQH
DGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILVTGKTRLRVNCVG
VFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSGIQRENLQKAMELVTINY
SSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLF
RLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNK
LDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaggatgacaaatagcagcagttcccctagccttctcaatgacagtgccaag
caatatgcaggccatgacccactgacttcaccagcttcatccttgtttaatgactttgct
gccctcagtttatctcagaggagaaagccaaggaagtatcgactggggatgctggaggag
aggatagttccggtgggatcaaaggcccgaaaatcaaagaacgctattggctgtctggct
gacaggtgtaaaacaggagtacccatcaatatggtttggtggaacagagtcacagaaaac
aattttcagacaccaaatcctactgcaagtgagtttattccaaagggaggatcaacttcc
aggctgaataatgtgtctcagtcaagtatgtctgccttctctcaagccttgttctctcac
ccctccatgggaagtcctgctactgctggactagctccaggaatgtcactgtctgcagga
tcttctcctcttcactcccctaaaattactcctcacacatctcctgctcctagaagaaga
agtcatactccaaacccagcaaattatatggtgcctactagtgcctctactcctgttact
aatgctgtctcccagcctccatctactggccaggtgattcagaaggaaactgtgggtgga
acaacatatttctacactgatacaactccagcccctctcacaggaatggtatttccaagc
tatcacatttaccctcccactgcacctcatgttgcttatatgcagcccaaagcaaatgca
ccttccttcttcatgacagacgaacttagacaggagctgatcaaccgacatttaataaca
atggctcaaattgatcaagcagatatccctgcagtccctacagaagttgacagctaccac
agccttttccctttagaaccactgccaccacccaatcggatacagaaaacaagcaacttt
gggtacattacatcatgctacaaagctgtaaatagcaaagatgatctgccatattgcctt
cggaggatacatggtttccgtcttgttaacacaaagtgcatggtattggttgacatgtgg
aaaaaaattcaacactcaaatattgtaactctgcgtgaagtgtttaccactaaagcattt
ggagaacattctcttgtgtttgcatacgattttcatgctggcggggagactatgatgagc
agacactttaatgaccctagtgctgatgcctatttcactaaaaggaaatggggtcagcat
gatggtcctctgccccggcagcatgctgggttactaccagagtctcttatttgggcatat
attgtgcagctcagctctgcattgaggaccattcatacagcaggattagcatgtcgagtt
atggatccaacaaagattctagtaaccggcaaaacaaggttacgagtgaattgtgttgga
gtctttgatgttttaacatttgataacagtcagaataatccactggcactaatggctcag
tttcagcaagcagatctgatctcactaggaaaagttgtgttggcgttggcttgcaattct
ttgtcaggaattcagagagaaaatttgcagaaagctatggaactggtgacaatcaactat
tcctctgatctgaagaatctgattttgtatttgctgactgaccaaaataggcttcgcagt
gtaaatgatatcatgcctatgattggtgcacgattctatactcaactggatgctgctcaa
atgagaaatgatgttatagaggaagaccttgcaaaggaggtgcagaatggaaggttgttt
aggcttctagcaaaattgggaacaatcaatgagaggccagaatttcagaaagacccaact
tggtcagaaactggagaccgatatctactgaagctctttcgggatcatcttttccatcag
gtgacagaagcaggcactccttggattgacctcagtcacattatctcatgtcttaacaag
ttagatgctggtgtgccagaaaaaataagcctcatttccagagacgagaagagtgtactt
gtggtaacttacagcgatttaaaacgctgctttgaaaatacttttcaagaactaattgca
gccgcaaatggtcagttgtag
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integrated database retrieval system
