Chelonoidis abingdonii (Abingdon island giant tortoise): 116816329
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Entry
116816329 CDS
T07367
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116816329 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116816329 (ROBO1)
Cell adhesion molecules [BR:
cabi04515
]
Immunoglobulin superfamily
ROBO family
116816329 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
116816329
NCBI-ProteinID:
XP_032621357
Ensembl:
ENSCABG00000004898
LinkDB
All DBs
Position
Unknown
AA seq
1616 aa
AA seq
DB search
MIAEFAHFYLFGLICLSSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPIPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NSSLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT
IRGGKLMITYTKKNDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVEDSA
EFKCEARGDPVPTVRWRKDDGELPKARYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKA
EASATLTVQVVSEPPHFVVKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSSSRFSVSQTGDLTITSVQRSDVGYYICQTLNVAGSITTKAYLEVTDVIADRPPPV
IRQGPVNQTVAVDGTLALNCVATGTLVPTILWRKDGVLISTQDSRIKQLETGALQIRYAK
LGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNT
VTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTESFAVKGLKPNAIYLFLVRA
ANAYGLSDPSQISDPVKTQDVPPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWT
VDQQSQYIQGYKILYRPATASRGESEWLIFEVRTPSKNSVVIPELKKGVNYEIKARPFFN
EFQGADSEVKFAKTLEEAPSAPPQSVSVTKNDGNGTAIVVTWQPPPEDTQNGMVQEYKVW
CLGNESRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGN
PVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHQKNRNGLTSTYAGIR
KVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPAPQPWLADTWPNTGNNHNDCSINCCT
SANGNSDSNLTTYSRPADCIANYNNQLESKQTNLMLPESTVYGDVDLSNKINEMKTFNSP
NLKDGRFVNQPGQPTPYATTQLIQSSISNNVNSSSGDTNEKHWKPSVQQKQEVAPIQYNI
MEQNKLNKDYRVNDNNAPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPK
QAGMNWADLLPPPPAHPPPHSNSEEYSLSVDESYDQEIPCPVPPARMYLQQDELEEEDDD
ERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCQEEIGHMQHHPDRRRQP
VSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEAEIEVAKMQNRRLLLRGLEQTP
ASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAG
LKVARRQVQDAAGGRRHFHASHCPRPTSPVSTDSNMSAVVIQKIRPAKKQKHQPGHLRRE
VYTDDLPPPPVPPPAIKSPTAQSKSQLEVRPVMLPKLASIEPRTDRSTERKGASYKGREG
ADGRQHSDVRTNSGERRELQEQQNDGKLRGNKAAKREGTAKTHLLQEDILPYCRPTFPTS
NNPRDPSSSSSMSSRGSGGRQRADQTNIGRRNAAEMQILGAYEQGEEEEELEETES
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggagtttgctcacttttacctctttggattaatatgtctctcttcaggctcc
cgtctccgtcaagaagatttcccacctcgaattgttgagcacccttctgatctaattgtt
tcaaaaggagaaccagcaactttgaactgtaaggcagaaggcaggccaatcccaactatt
gagtggtataaagggggtgaaagagttgaaactgacaaagatgaccctcgttcccatcgg
atgttgctgcccagcggatctttatttttcttacgcatagtacatggacgcaaaagtaga
ccagatgaaggagtctatgtctgtgttgcaaggaattaccttggtgaagctgtgagtcat
aattcatcgctggaggtagcaatattacgagatgacttcagacagaacccttctgatgta
atggtagctgtcggtgaacctgccgtgatggaatgccaacccccaagaggccatccagaa
cctactatttcatggaaaaaagatgggtccccactggatgacaaagatgaacgaattaca
atcagaggaggaaagctcatgattacctacacgaaaaagaatgatgctggcaaatatgtc
tgtgttggaacaaatatggtgggagaacgagagagtgaagtggcggagctcaccgtttta
gaaagaccatcttttgtgaagagacccagtaatttggctgtaactgtggaagacagtgca
gagtttaaatgtgaggctcgaggtgaccctgtgcctacagtaagatggcgaaaagacgat
ggggagttaccaaaagcaagatatgaaatccgtgatgatcacactttgaaaatccggaaa
gttatggcaggagacatggggtcttatacttgtgttgccgaaaacatggttggaaaagct
gaagcatcagcaactctaacagtccaagttgtgtctgaacctcctcattttgttgtgaaa
cctcgtgaccaggtggctgcattgggacggacagtgactttccagtgcgaagcaactgga
aatcctcaaccagccatcttttggcggagggagggaagtcagaatctgcttttctcatac
cagccgccgcagtcatccagccgcttttcagtctcccagactggtgacctcacaatcaca
agcgtccagaggtctgacgttgggtactatatctgccagactttaaacgttgcaggaagt
atcacaacaaaagcgtacttggaagttactgatgtgattgcagaccggcctcccccagtc
attcgacagggtcctgtgaatcagactgtagctgtggatggtacattagcactcaactgt
gtggccacaggcactctagtgcccacaatcctctggagaaaggatggggtcctcatctct
acccaggactctcgcatcaagcagctggagacaggagctttacagatccgatacgccaag
ctgggtgacactggtcggtacacctgcattgcctcaactccaagtggcgaagctacctgg
agtgcttatattgaggtccaagaatttggagttccagtgcaaccaccaagacccactgac
ccaaacttgattcctagtgcaccctcaaaacctgaagttacagatgtcagcagaaataca
gtaacactgtcatggcaacctaatttgaattcaggtgcaactccaacgtcttatataata
gaggccttcagccatgcatctggtagcagttggcaaactgtagcagaaaatgtgaaaact
gaaagttttgcagttaaagggctgaaacctaatgcaatttatctcttccttgtgagggca
gctaatgcatatggacttagtgatcctagccagatatctgacccagtgaaaactcaagat
gttccacctacaagccagggtgtggatcacaaacaggtccagagagagctcggggatgtg
gttctgcatcttcacaatcccactatcctttcttcttcctcaattgaagttcattggaca
gtggaccagcaatcccagtatattcagggatataaaattctgtataggcctgccactgca
tcccgcggcgaatctgaatggttaatttttgaagtgagaacaccatccaaaaatagtgtc
gtcattccagagctgaagaaaggtgtaaactatgaaatcaaggcccgccctttttttaac
gagtttcaaggagcagatagcgaagtgaaatttgcaaaaaccctagaagaagctcctagt
gctccacctcaaagtgtttcagtgactaagaatgacgggaatgggactgcaattgtggtt
acctggcagccaccccctgaggatacccagaatggaatggtccaagaatataaggtttgg
tgcctgggcaatgaaagcagataccacataaacaagacagtagatggttccaccttttct
gtagtcatcccttccttagttcctggtattcgatacagtgtggaagtagcagcaagtact
ggggcaggacctggagtgaaaagtgagccacagtttatccagttagattcccatggaaac
cctgtgtcaccagaagaccaagtcagcttagcccagcagatttcagatgttgtaaaacag
ccagctttcattgctggcattggtgcagcctgttggattattcttatggtcttcagcatc
tggttataccgccaccaaaagaatcgaaatggactcactagtacttacgctggtatcaga
aaagtcccgtcttttaccttcacaccaacagtaacctatcagagaggaggagaagctgta
agcagtggaggcagaccagggcttctaaacatcagtgaacctgcccctcaaccatggcta
gcagatacatggcccaacactggtaacaaccacaatgactgctccatcaactgctgcacc
tcagccaatggaaacagtgatagcaacctcacaacgtacagtcgaccagctgattgtata
gcaaattacaacaaccagctggaaagcaagcaaacaaatctgatgctgcctgagtcaact
gtttatggtgatgtggacttgagcaacaaaatcaatgagatgaaaaccttcaatagccca
aatctaaaggatggaagatttgtcaaccaacctgggcagcccactccttatgcaaccact
cagctcatccaatcaagcatcagcaataatgttaacagcagcagtggggatacaaatgag
aaacactggaaaccctctgttcagcaaaaacaagaggttgcacccatacagtacaacatt
atggagcaaaacaaattaaacaaagattacagagtaaatgacaataatgctccaactatt
ccatacaaccagtcatatgaccagaatacaggagggtcttacaacagttcagatcggggg
agtagtacatctgggagtcaaggacacaagaagggtgcccgcacccctaaggtacccaaa
caggctggcatgaattgggcagatctacttccacctcctccagcacaccctcctccccac
agcaatagtgaagagtacagtctttctgtggatgaaagttatgaccaagaaattccatgt
ccagtgccgcctgcaaggatgtatctacagcaggatgagctagaggaagaagatgatgat
gaacgaggtcctacacctccagtccgaggagcagcttcctctcccgcagctgtctcctac
agccaccagtctactgccactctaacaccttcaccccaagaagaactacagcccatgtta
caggattgtcaggaggaaataggccacatgcaacaccatcctgaccggagacgtcagcct
gtgagtcctccaccccctccaaggcctatttctccaccacacacctatggttacatttca
ggacctcttgtctcagatatggatactgatgcaccagaagaggaagaggatgaggcggaa
atagaggttgccaagatgcagaacagaagactccttttgcgtggccttgagcagacacct
gcctcgagtgttggggatttggaaagctctgtaacagggtcaatgattaatggctggggc
tcagcctcagaagaagacaacatatcaagtggccggtccagtgttagctcttctgatgga
tcattttttactgatgcagattttgcacaggctgttgctgcagcagcagaatatgctggt
cttaaagtagcaagacgtcaagtgcaggatgcagcaggaggtcgtagacattttcatgca
tcacactgccctagacccaccagccctgtgtctactgacagcaacatgagtgctgttgta
atacaaaagatccgacctgccaaaaagcaaaaacaccagccaggacatctgcgcagagaa
gtctacacagatgacctgccaccacctccagtgccacctcctgctattaaatctcctact
gcccagtccaagtcacagctggaggtgcgacctgtcatgttgccaaaactcgcctctata
gagccgagaacagacaggtccacggaaagaaaaggagcaagctacaaagggagggaaggg
gcagatggcagacagcattctgatgtgcggacaaattcaggagagcgcagagaattgcag
gaacagcaaaatgatgggaaactgcgaggaaacaaagcagcaaagcgagaaggcacagca
aaaactcatcttctccaagaggacatcttaccatattgtaggcctacgtttccaacatca
aataatccaagagatcccagttcctccagctctatgtcatcaagaggatcaggaggtaga
caaagggcagatcaaaccaatataggccgaagaaatgctgcagaaatgcaaatactggga
gcatatgaacaaggagaagaagaagaagaattagaggaaaccgaaagctga
DBGET
integrated database retrieval system
