Chelonoidis abingdonii (Abingdon island giant tortoise): 116816366
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Entry
116816366 CDS
T07367
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03022
Basal transcription factors
cabi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116816366 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
116816366 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116816366 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116816366 (GTF2H1)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116816366 (GTF2H1)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116816366 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
116816366
NCBI-ProteinID:
XP_032621417
Ensembl:
ENSCABG00000006106
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAVDNSVAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKVKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSKD
LFAECAKMDEKGLKTMVSQGVKNPLLDLTALEDKSLDEGYGVSSVPSTSNSSKSLKESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSMDGNSRDSDFFQPPIKKVKLQEAIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFHSIREEMEAYVPRLTQ
VLSSGAATSSITALSPGGALMQGGTQQAINQMVPNDVQSELKHLYVALGELLRHFWSCFP
VNTPFLEEKVMKMKSNLERFQVTKLCPFQEKIRRQYLSTNLINHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcatctgaggaagtgttactgatagtaaagaaggtacgtcaaaagaaacag
gatggggctctctaccttatggctgaaaggatagcatgggcacctgaaggcaaagatcga
ttcacagtcagccatatgtatgcagatataaaatgccagaaaatcagtcctgaaggaaag
gctaaaattcaactacagctggtactgcatgcaggggacacaaccaacttccacttctct
aatgaaagcacagcagtgaaggagcgagatgcagtgaaggaccttcttcagcaactgtta
cccaaattcaagaagaaagcaaataaagaacttgaggaaaagaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagccaagtaattagtgccgaa
gaattctgggccaaccgtttaagcttgaacgctgtggataattctgtggcacctagtaag
caggatgtgggcatctctgcagcttttctggctgatgttcgtcctcaaacagatggctgc
aatggtctgaggtataacttaacttcagatattattgaatccatattcaggacatatcct
gcagtaaaagtgaaatatgcagaaaatgttccacataatatgacagaaaaagaattctgg
acacgatttttccagtctcactacttccatcgagataggctgaatacaggctcaaaagac
ctctttgctgaatgtgccaaaatggatgaaaaagggttaaaaacaatggtatctcaaggg
gtgaaaaatccactgctagatttaactgccttggaggataaatcgttagatgagggttat
ggtgtttcctctgtgccatccacatcaaactcctcaaagtccttaaaggagagtagcaat
gctgccattataaaacgctttaatcatcacagtgccatggtccttgcagctgggctcaga
aaacaagaagcacaaaatgatcactacagtgagaccagcagtatggatggaaactccagg
gattcagatttctttcagccaccaataaaaaaggtgaagctacaggaggctattgaatat
gaagatttaggaaagaataatagcattaaaactattgcactaaacctaaagaaatctgat
cggtattatcatggtccaactccaattcaatcacagcaatatgcaaccagtcaggatatt
attaattcttttcatagtattagagaagaaatggaagcctatgtacccagactaactcag
gttctttccagtggtgctgctactagcagcatcacagccctgtcacctggaggagcactt
atgcagggtgggacacagcaagccataaaccagatggtgccaaatgacgtccagtctgaa
ctgaaacacttgtatgtggcacttggggagctactgcgacacttctggtcctgctttcct
gttaatacaccattcctagaagaaaaggttatgaaaatgaagagtaacttggaaagattt
caagttacaaagctctgtccattccaagaaaaaattcggagacagtatttaagcacaaat
ttgataaatcatatagaagagatgttgcagacagcctacaataagttccacacatggcag
tcccgacgtatgctgaagaaaacgtga
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