Chelonoidis abingdonii (Abingdon island giant tortoise): 116816429
Help
Entry
116816429 CDS
T07367
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cabi04040
]
116816429 (TRPC1)
Ion channels [BR:
cabi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116816429 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
LHD_TRPY1
Eno-Rase_FAD_bd
MTR4-like_stalk
Motif
Other DBs
NCBI-GeneID:
116816429
NCBI-ProteinID:
XP_032621533
Ensembl:
ENSCABG00000006505
UniProt:
A0A8C0GKL2
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVNKLLEQNSS
GDMNINCVDVLGRNAITITIENENLDILQLLLDYGCQSTDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTASDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLTVGIFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLIIWLI
VSLIISTHPREAYLQVNCAWCRTSRGSTDTAFESRMVWSDVKRLWYEGLEDFLEESRNQL
SFVMNSLYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYT
TSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGFTVNEEKDCAGIFCEQ
QSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLT
KLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNVIPSPKTICYLFNSL
SKWIGSHTSTGKVKRQNSLKEWRNLKQKRNENYQKVMCCLVHRYLTSMRQKMQSMDQATV
ENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPRN
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctgtaccagagcgcggacccgtccgcctcggcctcccccaacaagctgctg
gcgctgaaggacgtgaggcaggtgaaggaggagaccaccctggacgagaagcttttcctg
ctggcctgcgacaaaggtgactattacatggttaataaactcttggagcagaacagctca
ggtgacatgaacataaattgtgtggatgtgcttggaagaaatgctataaccattaccatt
gaaaatgaaaacttggacatattacagcttcttttggattatggctgtcagtcaacagat
gcacttttggtggcgattgactcagaagtggtgggagctgttgatattttacttaatcat
cgaccaaaacgatcctcaagaccaactattgtaaaacttatggagcgtattcagaaccca
gagtactcaacaactatggatgtagcgcctgtcattctagctgctcatcgtaacaattat
gagatccttactatgctgttgaaacaggatgtatctctacccaaacctcacgctgttggc
tgtgaatgcaccttgtgcacggcaaagaacaaaaaggatagcctacggcactccagattt
cgtcttgacatctatcgttgtttggccagtcctgccttaataatgttgacagaggaggat
ccaatcctgagagcttttgaacttagtgcagacttaaaagagttaagtcttgtcgaagtt
gaattcagaaatgattatgaggaactagcccaacagtgcaaaacctttgctaaagattta
cttgcacaggcacggaactcacgggagctggaagttatcctaaaccatacagctagtgat
gagcatgtggacaaacgaggattgttagaagagaggatgaatttgagtcgcctaaaactt
gctatcaagtataaccaaaaggagtttgttgcccagtctaactgccagcagtttctcaac
actgtgtggtttggacagatggcaggctaccgacgcaagcacacgtgtaagaagattttg
actgttttgacagttggcatcttttggccagttctgtctctctgttacttattagcccct
aaatctcgagtaggtcgaataattcacactccttttatgaagtttattattcatggagct
tcatatttcacattcctgctattacttaacttgtattcactggtttacaatgaggataag
aagaatacaatggggccagcgcttgagagaatagactatcttctgataatatggcttatt
gtatcattgataatatcaacacatcccagggaagcatatttgcaagttaattgtgcttgg
tgcagaaccagtagagggagcacagatactgcttttgagtcaagaatggtgtggtcagat
gttaaaagactttggtatgaaggcctggaagactttttagaagaatctcggaatcagctt
agttttgtcatgaattccctctatttggcaacctttgctctcaaagtagttgctcataac
aagttccatgattttgctgatagaaaggactgggacgcattccatcctacactggtggca
gaaggtctctttgcttttgctaatgttcttagttaccttcgactcttcttcatgtataca
accagttctatcctaggaccacttcagatttcaatggggcagatgttgcaagactttgga
aaattcctagggatgttccttcttgtcttgttctcattcacaattggattgacccaactg
tatgacaaaggatttactgtaaatgaagagaaggactgtgcagggatcttctgtgaacag
caaagcaatgacacattccattcgtttattggcacctgctttgctctgttctggtacata
ttctcccttgcacatgtagcaatctttgtcactagatttagctacggtgaagaattgcag
tcttttgtgggcgctgttattgttggtacctacaacgtagtggttgtgattgtccttacc
aagctcttagtggcaatgcttcataaaagctttcagctgatagcaaatcatgaagacaaa
gaatggaaatttgctcgtgccaaactttggcttagctactttgatgataaatgcacacta
cctccacctttcaatgtcattccctctcccaagactatctgctatctcttcaacagtctt
agtaaatggatcggctctcatacttcgactggcaaagtcaaacgtcagaatagcctaaag
gaatggagaaatctgaagcaaaagaggaatgagaattaccaaaaggtgatgtgttgttta
gtccatcgttacttaacctccatgagacaaaagatgcaaagcatggatcaagcaactgtg
gaaaatctcaatgaactgcggcaagatttatcaaaatttcgaaatgaaatgagggatctg
cttggctttcggacatctaaatatgctatgttttatccaagaaactaa
DBGET
integrated database retrieval system
