Chelonoidis abingdonii (Abingdon island giant tortoise): 116816795
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Entry
116816795 CDS
T07367
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1-like
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116816795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cabi02000
]
116816795
Transporters [BR:
cabi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116816795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Rad17
RsgA_GTPase
ECH_2
DUF6789
Motif
Other DBs
NCBI-GeneID:
116816795
NCBI-ProteinID:
XP_032622208
Ensembl:
ENSCABG00000000316
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MKWGAQTREEYVHVREDAVCPDVNCVKAEKNVTESRKKNTKGNYERDIGFGYADWLDIIL
MIIGLIAAVANGTGLPLIIIVFGEMTNRCVMIGEAVNMSSPLMNSSSTCPAIPGLDIEAE
MTRFAYYCAGIGFAIVIQSTIQVWTFFTSAARETARIRQKYFFAILYQEMAXFDTSQIGT
LNTQLTDDINTIHEGIGDKFCIFVQFFATFLTGIVIGFVYRWKLTLVILSVSLLLAAAEA
VGPFFLASFTTKELTVYARAGAVAEEILTAIRTVVVFNGQMKALAKYDVNLKNARKVGVK
KPITTYTSLGFTEFILFGAFALAFWYGTKLIVEEKENYDIRRVLIILFSLLRGAFSLSQG
SPHFESVANARGAAYEVYKVITKDRLIDSNAKEGYRPDKLKGEIEFKNIYFSYPSRPDIN
ILKGLNLKVQSGKTIALVDSSGCGKSTAIQLLQRFYDPVQGEITLDGRDIWTFNIKXLRE
HIGLVSQEPILFAVIPIRCGREGITDSEIEKAAKEANAFDFISRLPDKFNTMVGETGAQL
SRGQKQQIAIARALARNPRILLLDEATSALDTHSESIVQAALDKARAGRTTIVIAHRLST
IQTADIVAGFHNGVVVEQGTHDXQKGVYYSFVMQQAFQETEPEKRSKNTTSLSLMFLVLA
VISLITHIIQGFIFGKSGEVLTKRLRTLSFKALLQQEIGWYDDPKNAIGVLLTRLATDAS
QVKGATGSQLGLFTKTVSTLLTAIIIAFVYDWRLTLLILACIPFIIAANAVRLSSVAGHV
SKDQKALEEASRISTEVVENIRTVASLSSEDAFCERYNASLNGPYRDSLTKALLYGLTYG
IAQCATYFLEAAIFRFGGWLIANCYDELKEVLCLVFRAFFTVLFGAMNVGQSTSLAPDFG
KAKVSAQRIFQFLDRKPLIDSYSEEGTKLSKFDGNTEFRDIHFIYPTRPEAQVLQGLSVK
VNKGQTLALVGSSGCGKSASIQLLERFYEPVAGQGFADGLDTKSLYLQWLRSKLGIVSQE
PILFNCNIAENMQYGDNSRVVSQEEVEEAAKAANIHTFIENLPEKYNTRVGDKGAHLSGG
QKQRIAIARALVCKPAVLLLDEATSALDTESEKIVQKALDDARKGRTCIIIAHRLTTIQK
ADVIAVIHNGKVVEQGTHSQLLAKEGHYYALVNAQVSH
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggggggcgcaaacacgagaagaatatgtgcatgtgcgggaagatgcagtctgc
ccagacgttaactgcgtcaaggccgagaaaaacgtgacggaaagccggaaaaaaaacaca
aagggaaactatgaacgagacatcggatttggatatgccgattggctggatatcattttg
atgataataggcttgattgcagctgttgcaaatggaacagggctgccacttattatcatt
gtctttggagaaatgacaaacagatgtgtgatgattggcgaagcagtaaatatgtcttca
cctctgatgaatagtagctctacttgtccagcaattccaggtttggatatagaagctgaa
atgaccaggtttgcctactactgtgcaggtattggctttgctatagtgatacagagcacc
atccaagtctggacattttttacctcagctgcaagagagacagcgagaatccgtcaaaag
tatttttttgccatactttaccaggagatggcttgatttgataccagccagattggaacg
ttgaacacccaactgacggatgacattaacaccatccacgaaggcattggagacaagttc
tgtatatttgtacaattctttgccacgtttctgacagggattgttataggattcgtttac
aggtggaaactgaccttagtgattttgtcagttagccttctccttgctgcagcagaagca
gttggaccatttttcctggcatcattcactacaaaagagttgactgtttatgctagagct
ggagctgtggcggaagaaattttgactgctatcagaacagttgttgttttcaatggacag
atgaaggcactagcaaaatatgatgttaacttaaagaatgctaggaaagttggagtcaaa
aaaccaattaccacctacacgtctttgggtttcacagagtttattttatttggagccttt
gctcttgcattttggtatggaaccaaactcatagtggaggagaaagagaattatgacatc
agacgtgtgttaattatattattctctctactccgtggtgcattctctctcagccagggc
tccccacactttgagagtgttgccaatgctcgaggtgctgcctatgaagtgtacaaggtc
atcactaaggaccgtctaatagatagcaatgccaaagaaggatacagaccagacaagctc
aaaggagagattgaattcaaaaacatttatttcagttacccatcaagacctgatattaac
attctcaagggcctgaacctgaaagttcaatcggggaagaccattgctctggttgactcc
agtggctgtggcaaaagtactgctattcagctgctacagagattctatgatccagtccaa
ggggagattaccttagatggacgagatatttggacatttaatataaagtgactaagagaa
cacattggccttgtaagccaggagcctattttgtttgcagtaatacccattcgctgtggc
agagagggtattactgattctgaaattgagaaagcagctaaagaagccaatgcttttgat
tttatatccagactgcctgataaatttaacaccatggtgggggaaacgggagctcagctg
agcagagggcagaaacagcaaattgctattgcccgtgccctggcaaggaatcccaggatt
ctgctgctggatgaagccacgtctgctctggacactcacagtgaatctattgtgcaagca
gctcttgataaggctagggctggacgtaccaccattgtgatagctcaccggctctccaca
atccaaacagctgatattgtcgctggatttcacaatggtgttgttgttgaacagggaact
catgacnnacagaagggtgtttactattcttttgtgatgcagcaggcttttcaagaaaca
gagcctgaaaaaaggagcaaaaacaccacatcactttctctaatgtttcttgtcctggca
gtgatcagcttaataacacacatcatccaaggattcatatttggaaagtctggggaagtt
ctgaccaagagattgcgaactttgtcattcaaagcattgcttcagcaggagattgggtgg
tatgacgatcctaaaaatgccataggggttttgttaaccagactagctacagatgcttca
caagtcaaaggggctactggaagccaacttggcctgttcactaagactgtctctaccctt
ctgacagccatcattattgcttttgtatatgactggcggttaaccttgcttatcctggcc
tgcattcctttcattattgctgcaaatgctgttcgactgagctctgtggctggtcatgtg
tcaaaagatcaaaaagctttggaagaggccagcagaatttcaacggaagtggttgaaaat
ataagaactgtggcttcattaagtagtgaagatgcattctgtgagaggtataatgcaagt
ctgaatggtccatacagggactctctaacaaaagccctgctatatggacttacctatgga
atagcccaatgtgcaacctactttcttgaggcagcaatcttcagatttgggggatggctc
attgctaattgttatgatgaactgaaagaagttttgtgtttagttttcagagcctttttt
acagttctatttggtgctatgaatgttgggcagtccacttctttggcaccagattttggc
aaagctaaagtttctgctcaacgaatctttcagtttttggatcggaaacccttaattgac
agctatagtgaagagggtacaaaactgagtaagtttgatggcaacactgaattcagggac
atccattttatataccctacaagaccagaagctcaagttttgcaaggactcagcgtgaag
gttaataaaggacagacgctggccttggtggggagcagtggctgtggcaaaagcgcatcc
attcagctgctggagagattttatgaacctgtggcaggacaagggtttgcagatgggtta
gatacgaagtctttgtatttgcaatggttaaggtccaaattgggtattgtgtcccaggag
cctattttgtttaactgcaacattgctgaaaatatgcagtacggagacaacagtagggtt
gtcagtcaggaggaagttgaagaggcagctaaagcagcaaatattcacaccttcatagaa
aatctcccagagaagtataatacccgagtgggtgacaaaggagcacacctttctggaggt
cagaaacaaagaatcgcaattgctcgtgctctagtttgtaagccagcagttctgcttctg
gatgaagccacatctgctcttgacacggaaagtgaaaagattgtccagaaagccttggac
gatgccaggaagggtcgaacctgcattattattgctcaccgcttgacaaccatccagaaa
gctgatgtcatagcagtgattcataatggaaaagtagtggaacaagggactcacagtcag
ctgctggcaaaagaaggacattactatgcacttgtaaatgcacaagtttctcattaa
DBGET
integrated database retrieval system
