Chelonoidis abingdonii (Abingdon island giant tortoise): 116816978
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Entry
116816978 CDS
T07367
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116816978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116816978
03036 Chromosome and associated proteins [BR:
cabi03036
]
116816978
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116816978
Coactivators
SAGA/TFTC/STAGA complex
116816978
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116816978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
116816978
NCBI-ProteinID:
XP_032622567
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MAAGASDSLEDMLLFSEEVDEKAVSDLVGSLESQLAGGRGSAEGGPPNSSPPSHQQQEHQ
GSLVQGGSPVQQQQQGHPAPPHFPGAGEAARCPRAVGSPPPALSPPAATAGRAASVNSSS
MQQSHGAAPWSNNPSVPAAPAPLQSAAPPPPVGAPTQPVNNHVDAKAAAGSGAWEMESPR
PGCSSPAAAAGAVDSVLLLNSEAATAGGLPEAAGAVTPVAAAAASRELAKAVMLGSTAAA
APPPPPPVLSLLQGPALHTVPPAAHSGNGTSSSVPVVVTQSLKAGCAPAAITQVVNHQNP
AVSHSKPDSSTAQTKFLTHNPAVNALSNSTSSVPTMNLVTHPAQNSVANCAPVVSSPITL
TAISKPAVNIIGPPGSAVGVAKSATAVPVVSAVPQLLSPRPAVGSAQRIVAPQLIVRPPQ
QTTIQLPPGFTIPPGMVLVRTEAGQLVMVPQQVLAQAQVQAQVRTQGQGPASISPRLSLP
TSGPVFHLTTTQQPTSVAASAVHLGLPVQAKVVQSTATPVSATSTATLPGGSTLSHTTVS
VATTSSQSLIKTAAATGTPATQQPTVIFGGQTQTAAQPQGHPRLPLLPHTTAQVPARPQV
IPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSSSPETSHNVKALVQDLLDAKID
PEEFTGCLQSELKSSPQPYLVPFLKKSLPALRQSLLNSQHSVLQGQPSQQPLQQTKLSQV
IPQPASGSISSNVTTQTVGIRQPNSFSTFVSNTVQPPQVKLVQSNQSTQLIIQSTSAQTV
KRNPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASQSPGGFGVQVSANQKNKLNDPGGG
SFRDDDDINDVASMAGVNLNEESARIMATSSDLVGTQIQSCKDEPFLAAIPLHKRILEMA
KKLGITDVPAEVVTFISHATQNRLRTVIEKVTMVTQHRMESHKDDEWYEQATDVRSQLKF
FEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANL
TALAAIGPRKKRKLDSPGLLTIGREALGMTSGGQAGYGASSSRQYMRQKITRVNLRDFIF
YMEQERETSHSLLLYRALLK
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcctcggactctctggaagatatgctgctcttctccgaagaggtggac
gagaaggcggtcagcgacctggtgggctccctggaatcacagctggccggcgggcggggc
tccgccgaggggggcccccctaacagcagccccccatcccaccagcagcaagagcaccag
gggagcctggtgcagggcggcagcccagtccagcaacagcagcaagggcatcctgctcct
cctcatttccccggggcaggggaggccgccaggtgtccacgtgccgtgggcagcccaccc
ccagccttgtctccgccagcggcgacagccgggagggcagcgagtgtaaacagtagtagc
atgcagcaatcacatggagcagctccttggagcaacaacccgagtgtacctgctgcccct
gccccactgcagtccgctgccccacctccgcctgttggcgccccaacccagcctgtcaac
aaccacgtggatgccaaagccgctgctggcagtggtgcctgggaaatggagagccccaga
cctgggtgtagttctccggcagcagccgctggtgcggtggacagtgtgttgctgcttaac
tccgaggccgccactgctggagggttgcccgaggctgccggtgctgtcactccagtagca
gcagccgcagcaagtcgggaacttgcaaaggcggtaatgctgggtagtacagctgctgct
gctcctcctcctcctcctcctgttctctctcttctccagggacctgcgctgcatactgtt
cctcccgcagcacacagtgggaatggcacttcttccagcgttcctgtggttgtcactcag
agtctaaaggctggttgtgccccagcagcaataacacaagttgttaaccatcagaatccg
gctgtcagccacagcaaaccagactcctccacagcacagactaaatttctcacacacaat
cctgcagtaaatgcactcagtaactctaccagttctgttcctacaatgaaccttgtcacc
catccagcccaaaattcagtagccaactgtgccccggtagtgtccagcccgatcactctc
actgctatttctaaacctgcagttaatattatagggccacctggctctgctgttggtgta
gccaaatcagccactgctgtacctgtcgtctctgcagtcccccagttgttgtcacccaga
cctgcagtgggttctgctcagagaatagttgcaccacaactgattgttagaccgcctcag
cagactacaatccagttgcctccaggttttactataccacctggtatggtcttggtgcgc
acagaagctggacagcttgtaatggtacctcagcaggttttagcccaggctcaagtgcaa
gctcaagtacgaacacaagggcaaggacctgccagcatctcacccaggctttcattgccc
acaagtggtccagtttttcatttaacaacaacccagcaacctacttctgtagccgcatct
gctgtccacctgggacttccagtgcaagccaaagttgtacaatcaactgctacaccagtt
agtgctacatctactgcaaccttacctggaggctctactctgtcacacactacagtatca
gtagctaccacaagttctcagagtttaattaaaacagcagcagcaactggaaccccagca
actcaacaacctacagtaatttttggaggacaaactcaaaccgcagcacaaccccagggt
catccacggttgccacttctaccccatacgacagcacaagtaccagcacggccccaggtc
atacctagctctcctgtaccagggactacagttgtatcacaggaaatgcaagagaatgtg
aagaaatgcaaaaactttttagctaccctgataaaacttgcttcccataattcatcttct
ccagaaacatcccataatgtgaaagctctggttcaggatttgctggatgcaaagattgat
ccagaagaatttacaggctgccttcagtcagagctgaaatcatctcctcagccatatcta
gtacctttcctgaagaaaagtctgccggcattgagacaatctttattgaatagccaacat
tcggttttgcaaggacagccatctcagcagccgcttcaacaaaccaagctgtcacaagtt
atacctcaacctgcctctggaagtatttcctctaatgtcacaactcagacagtaggaata
aggcaaccaaacagcttttccacatttgtatcaaatacagttcagcctcctcaggttaaa
ctagtacagtcaaatcagagtactcaactgattatccagtcaacatctgctcaaactgtg
aaacgaaaccctgcttgccagactacccagattaggatgccagtggtaataactcagacc
attagaccacaaggcacagtagggaaggcaccaacaatacaagccagccaaagtcctggg
ggctttggtgttcaggtctctgcaaatcagaaaaacaagttgaatgaccctggaggtgga
tctttcagagatgacgatgacatcaatgatgttgcctctatggctggagttaaccttaat
gaagagagtgctcgaattatggcaaccagctccgacttggttggaacccagatacagtct
tgtaaagacgaaccctttcttgctgctatccctttacataaacgaatactagaaatggct
aaaaaattaggaattacagatgtgcctgctgaggtggttacctttatttcccatgcaaca
caaaaccgattgagaaccgtgatagaaaaagtaacaatggtaacacagcaccgaatggaa
tcgcacaaagatgatgaatggtatgaacaggctacagatgttcgatcacaactgaagttt
tttgaacagttggagcgtttagaaaagcaaagaaaagatgaacaagaaagggaaattttg
ttaaaggcagccaagagtcgctcaaggcaagaagacccagagcaagctaggctgaaacaa
aaagcaaaggagatgcagcaacaagaactagcacagatgaggcagagggatgccaaccta
actgcattggcagctattggtccacgaaagaaacggaagcttgattcacctggtttactt
accataggaagagaggctttgggcatgaccagtggaggtcaggctggttatggggcctct
tcatccagacagtatatgcgacagaaaataactcgagtaaacctcagggacttcatcttt
tacatggaacaggaaagagaaactagccattctctcctgctttacagagctttacttaaa
taa
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integrated database retrieval system
