Chelonoidis abingdonii (Abingdon island giant tortoise): 116816996
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Entry
116816996 CDS
T07367
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03013
Nucleocytoplasmic transport
cabi03015
mRNA surveillance pathway
cabi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116816996 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
116816996 (NCBP1)
03015 mRNA surveillance pathway
116816996 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116816996 (NCBP1)
03041 Spliceosome [BR:
cabi03041
]
116816996 (NCBP1)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
116816996 (NCBP1)
Spliceosome [BR:
cabi03041
]
Common components
Common spliceosomal components
Cap binding complex
116816996 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
Vfa1
DUF1690
DUF7197
Motif
Other DBs
NCBI-GeneID:
116816996
NCBI-ProteinID:
XP_032622599
Ensembl:
ENSCABG00000006173
UniProt:
A0A8C0GKP6
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MQKICGASARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKANMYNEAVYL
VRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYVFAFLSSLPWVGKELYEK
KDAEMDRILSQTESYLKRRQKIHVPMLQVWSADKPHPQEEYLDCLWAQIQKLKKDRWQER
HILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGPVMPGSH
SVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVVFAELFQLPVPPH
IEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRFMNWFSHHLSNFQFR
WSWEDWSDCLTHDLDKPKPKFVKEVLEKCMRLSYHQRIIDIVPATFSVLRPANPSCIYKY
GDESNKSLPGYTVALCLTIAIKNKTSNDEIFGILKDVPNPNQDDDDDEGFTFNPLKIEVF
VQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMIAVLVDK
MIRTQIVDCAAVANWIFSPELAHDFTRFYIWEILHSTIRKMNKHVVKIQKELEETKARLA
RQHKRRDSDDDDDDDDRSSDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILT
EHLVRCETGGTDVITPWYKNCIERLQQIFLQHHQIIQQYMLTLENLLFTAELDHHILAVF
QQFCALQA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagatttgtggagccagtgcacgtttgttaccagaaaagcttaccgtttacaca
acattagttgggttgctgaacgccaggaactacaattttggtggggaatttgtagaagct
atgattcgtcagctcaaagaatgtttgaaagccaatatgtataatgaagctgtgtattta
gttcgttttctgtctgaccttgtgaattgtcatgtaatagctgcgccttcaatggtagcc
atgtttgagaactttgtgagtgtgactcaagaggaggacgtgccccaggtgcgatgtgac
tggtatgtgtttgcatttctgtcatctctgccctgggttggaaaggaactgtatgagaag
aaggacgctgagatggaccgcattttgtcccagactgaaagctatttgaaacggcgtcag
aagatccatgtacccatgttacaagtttggtctgctgacaaaccacatccacaagaagag
tatttagactgcctttgggctcagattcagaagttgaaaaaagatcgctggcaggaaaga
cacattctgaggccctatcttgcctttgacagcatcctctgtgaagcactgcagcacaat
ctgcctcctttcactccaccacctcacactgaagattcagtttaccctatgccgagagtc
atctttagaatgtttgactacacagatgatcctgagggtccagttatgcctggcagtcat
tcagttgagagatttgtaatagaagagaatcttcactgcatcatcaaatcccactggaaa
gagagaaaaacgtgtgctgcacagctgctgagctatccaggaaataacaagatccctttg
aactatcacatagttgaggtagtatttgcagaactgtttcagcttccagttcctccacac
attgaggtgatgtatacaacacttctgattgaattgtgcaaacttcaacctggctcttta
ccacaggttcttgcacaagccacagaaatgctgtacatgcgtttggatacaatgaacact
acgtgtatagacaggttcatgaactggttttcccaccatctgagtaactttcagttccgt
tggagctgggaagattggtcagattgtcttactcatgaccttgacaagcccaaacccaag
tttgtaaaagaagttttggaaaaatgcatgaggctttcataccatcagcgaataatagat
attgttcctgctacattctctgtccttcgtcctgcaaacccatcatgtatttataaatat
ggagatgaaagcaataagtctctgccgggatatactgttgcactctgtttgaccattgcc
attaaaaataagacaagtaatgatgaaatcttcggcatcttaaaagatgtgcccaatcct
aaccaggatgatgatgacgatgaaggattcacctttaaccccttgaaaatagaagttttt
gtacagactctgctccatttagctgccaagtcgttcagccactcattcagtgctctggca
aagtttcatgaagtcttcaaaaccctcgctgaaagtgatgaggggaagctccatgtgctg
agggttgtgtatgaggtctggaagaaccatccacagatgattgctgtgcttgtggataag
atgattaggactcagatagttgattgtgctgctgtggcaaactggatcttctctccagag
cttgctcatgattttactaggttctatatctgggagatcttacactccacgattcgtaag
atgaacaagcatgtagtgaagatccaaaaggagctagaggagactaaagcaagattagcc
aggcaacacaaacgacgagacagtgatgatgacgacgatgacgatgaccgaagcagcgat
agggaagatggaccattggaagagcagatagaacgcttgcaggagaaagtagaatctgct
cagagtgaacaaaagaatctcttcctcgttatattccagcgtttcattatgatattaaca
gagcatttagtgcggtgtgaaactggtgggactgatgtaattacgccttggtacaagaac
tgtatagagaggctgcagcagatcttcttacagcatcaccagataatccagcagtacatg
ctgaccttggagaatctcctctttacagctgaattggaccatcacatattggctgttttt
cagcagttctgtgctctgcaggcctga
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