Chelonoidis abingdonii (Abingdon island giant tortoise): 116817282
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Entry
116817282 CDS
T07367
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116817282 (SH3TC1)
Membrane trafficking [BR:
cabi04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116817282 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_8
TPR_1
SH3_1
TPR_19
TPR_10
ANAPC3
TPR_7
SH3_2
Csd3_N
Motif
Other DBs
NCBI-GeneID:
116817282
NCBI-ProteinID:
XP_032623135
LinkDB
All DBs
Position
Unknown
AA seq
1362 aa
AA seq
DB search
MELPAAAVECNVSVYGLHTLMEEEGFCSSAPYLERKQHSSWEGNKQQLGRSVSDFMHVAA
NTAISTSINMKEEVSSQGQMAMDFSPNNCLKTSSKIPPSPAESFPTDISLKLIMVERKSG
LPDPRLQGELRGRLRLLENDNREVMAVFSELSARLLSIHSDQDLIVLTFKTFEEIWKFLT
YHSLGFINHCMENVLLDQSFWLCSQEENEAKQEEAGIEVCINEESLNLMYRGLLIQEGTF
FVLCPDNLIRETTAADMEMKVYQENRRVTEDISGGSLGDDLTLLANPAAETLIPFHQWFL
KVYSDPVNFASKMESKCSKKIATGSSQAVISYASAVPEEISFQSGDKIEIIGYFIECLEW
FVGRHMLTGQIGFVKTSHVKPDTSGTEQQNLDFLNEEERTFFAKERNVVEEDVVHLLKQT
SNTEVCTVYRVDRLEELEFQNPQEQEMPHPSSNTDSNRIREMVKESLMKCKDFQLQLNGT
SSQGNDFPSSSNQQTCALAEEPHFCMQQDEEDQGSGVFESLLLFLNSKEYEVHFKNLYDF
SFPFLNTTFYGYTSEEELVDYFGLAREAAKKANLPWALTRLCFLLGRLSIRKLKFSQARV
YFEEALGAIRGGFNDLYLVVALYTNLTVIYLRQKNKEKCAHIFDKVTSLLMGIPNYICST
DMESDILRYALKRTVLSQSKHAEARACFLLAKHYTKLKQYEEALPFLERLQLLNNDLDLQ
KSSLSTDCYFRLGESYSQKCLPHIVLSCIKVASSQGSYTLRDCLRSINLVTKNAPKLHRL
RKAGQMFPSQIAPYLRQALSSAFTNEQQKLCSTIYLSLSELYSHHRLYGEAIVYMEKVLH
FNTPAHAGETINHLVSLAWLYILHRQNTVALAILNTVIDSSLSSPPQLGVIYNMTAIALK
RTNNTKRAAVSYYKALHISEDADMVHNHAVVLANFGTLCLHLAANGLAEHYYVKAVKLFS
GLPSLDCGHNFTQVLLQLGYYYANEMHKKRGRFYYEWALLVAMETNHLESQLQAVQLLCQ
FYTTVVPDEAQCVIYNEYQLSLARKMSDKVLEGQILETISQLYLSLGTERAYRSALEYTK
RSLGIFIDLQKKEKEAYAWLQAGKIYYILRQNELVDLYIQVAQDVALCNGDPNLGVELFE
AAGDIFFNGTWEREKAVSFYRDRALPLATKTGNKKAELRLCNKLVQLLLNLQDYEDSLEY
AQISLTLSVNLGNQLNERIAYHRLAAIHHRLGQCELAEHFYLKALSLCSSPLEFDEETMY
YVKVYLILGDIIFYDLKDPFDAAGYYHLALAAAMDLGNKKAQLKIYTRLAIIYHNFLMDR
EMSLFFYQRARTFATELNVRRINLAPDQYYKNATWVPVKNVM
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggagctcccagcagcagcagtggaatgcaatgtttctgtttacgggctccacaccctg
atggaggaggaaggattctgcagttctgctccctatctggaaaggaaacaacatagctct
tgggaaggaaataaacagcagctggggaggagtgtgtctgactttatgcatgtggcagct
aatactgccatttccacatcgattaacatgaaagaggaggtctcttctcaaggacaaatg
gccatggacttttctccgaataactgcttgaagaccagttcaaagatacctcccagtcca
gcagagagttttccaacagatatctccctgaagctaatcatggtagaacgaaagagtgga
cttcctgacccccgactgcagggagaactgagaggacgacttcgtcttctggagaatgac
aacagggaggtcatggcagtttttagtgagctgtctgccagattgttgtctattcacagt
gaccaagacctaatagtgttgacatttaaaacatttgaagaaatatggaagtttttaacc
taccattcccttggttttataaatcactgcatggagaatgtgttgctagatcagtctttc
tggctctgttcccaagaagagaatgaggctaaacaagaagaagctggaattgaagtctgt
ataaatgaagagtctctaaatttgatgtacagaggtctgttaatacaggaaggaactttc
tttgtcttatgtcctgacaacctcataagagagacaacggctgcagacatggaaatgaag
gtttatcaagagaacagaagagttactgaagacatctctggtggatcactgggtgatgac
ctgaccttattggctaaccctgctgcagagactttgatcccttttcatcaatggtttctt
aaagtatactctgatcctgttaattttgctagcaaaatggagtctaaatgcagcaagaaa
atagctacaggatcttctcaagcagtgattagttatgcaagtgcagtgcctgaagagatt
agcttccagagtggagacaaaattgaaataattggctacttcatagaatgcctggagtgg
tttgttggaaggcatatgttgacgggtcaaattggttttgtaaagaccagccacgttaaa
cctgacacctctggaactgaacaacaaaatctggattttctcaatgaggaagagagaact
ttttttgcaaaagaaagaaatgttgtggaagaggatgtggtgcatttattgaagcaaacg
tcaaacactgaagtttgcactgtgtacagagtagacagattagaagaattagaatttcag
aaccctcaagaacaagaaatgccacatccctcatctaatacagactccaatagaatcagg
gagatggtaaaagaatcccttatgaaatgtaaagatttccagctccagttgaatgggaca
tctagtcaaggaaacgattttcctagctcttcaaatcagcagacctgtgccttggctgaa
gagccacatttctgcatgcaacaagatgaagaagatcaagggtctggggtctttgagtca
ttattgttgttcttaaacagtaaagagtatgaggtgcacttcaaaaacctgtatgacttc
tccttcccatttcttaacaccacattttatggctacactagtgaagaagaactggttgac
tattttggattggcgagggaggcagcaaagaaagcaaatctgccttgggccctaacaagg
ctatgctttctcttgggtagactgagtattagaaagcttaaattttcccaagctcgtgtt
tattttgaagaagccttaggagctataagaggaggttttaatgacctgtatcttgtagtt
gctctttatacaaatctaacagtcatctacttgagacagaagaacaaagaaaaatgtgct
catatttttgacaaggttacttctctgctcatgggaattcccaactacatctgtagcact
gacatggagtcagacatactaaggtatgctttaaagaggacagtactgagtcagagcaag
catgcagaagccagagcatgcttcctattggcaaaacattacacaaaacttaaacaatat
gaagaggcactaccattcctagaaaggctgcagcttttgaataatgacttggatttacag
aagagctcactgtcaaccgactgctattttagactaggtgagtcctacagtcaaaaatgc
ttgccacacattgtgctaagttgcataaaggtagcctcttcccagggatcatatactcta
agggactgtttgagaagcattaatttagtcaccaaaaatgctcccaaactccataggctg
agaaaagctgggcaaatgttcccatcccaaattgcaccttatctcagacaagcactttcc
tcagcgtttaccaatgagcagcaaaaactgtgcagcacaatttatcttagcttatcggaa
ctgtacagtcatcacagactgtatggagaagccattgtttatatggagaaagtactgcac
ttcaatactcctgcccatgctggagaaactattaaccatttagtttcacttgcttggtta
tatattcttcacaggcaaaatactgtagctttggccatcttaaataccgtaatagactct
tcattgagtagtcctcctcagttaggtgttatttataatatgactgccattgctttgaaa
cgaaccaacaacacaaaacgagctgctgtgagttactacaaagctctgcacatttcagaa
gacgctgatatggtacacaaccatgctgtagttctggctaattttggaactctctgcctg
catttagcagccaatggtttggcagagcactactatgtcaaagcagtaaagctattctct
ggacttccaagcttggactgtggtcacaattttactcaagtcctcctccaactgggatat
tattatgctaatgaaatgcataagaaaagaggacgattttattatgaatgggcattattg
gtggcaatggaaacaaatcatttggaaagtcagctccaagctgttcagttgctgtgtcaa
ttctacactacagttgttccagatgaagctcagtgtgtcatttacaatgaatatcaactg
tccttggctaggaaaatgtcagacaaagttttggaaggacaaattttggaaaccatcagt
cagttgtatctctctttaggcacagaaagggcttacagatcagctctggaatataccaaa
agaagccttggaatatttatagatcttcagaagaaagagaaagaggcatatgcgtggctt
caggcaggaaagatctattatattttgaggcagaatgagctagtggatctttatattcag
gttgctcaagatgttgctctttgtaatggggatccaaacttaggagtggaattgtttgaa
gctgcaggagacatttttttcaatggtacctgggagagggaaaaagcagtgtcattctac
agggacagagctcttccacttgccactaagactggaaacaaaaaggcagaactccgatta
tgcaacaaactagtgcaattgctgttaaatctacaggattatgaggacagtctggaatat
gcacaaatatccctcacgcttagtgtgaatttaggaaatcagctaaatgaacgaatagca
tatcacagactggctgctatccatcatcgcctgggtcagtgtgaacttgctgaacacttt
tacttaaaagcgttgtccctttgctcctcgcctctggaatttgatgaggaaacaatgtat
tatgtgaaagtgtatctaatcctaggagacattatattctatgacctaaaggatcctttt
gatgcagcaggatattatcatctggcacttgcagctgccatggacttgggcaacaaaaag
gctcagttgaagatttatacaagacttgcaataatctaccacaatttccttatggatcgg
gagatgtctcttttcttctatcaaagggcaagaacttttgcaacagagcttaacgttcgg
agaataaacctggcacctgatcagtattataagaatgcaacatgggtacctgtgaaaaat
gtcatgtga
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