Chelonoidis abingdonii (Abingdon island giant tortoise): 116817477
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Entry
116817477 CDS
T07367
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116817477 (RC3H2)
04121 Ubiquitin system [BR:
cabi04121
]
116817477 (RC3H2)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
116817477 (RC3H2)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116817477 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
116817477
NCBI-ProteinID:
XP_032623546
Ensembl:
ENSCABG00000001633
UniProt:
A0A8C0G4W3
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRALRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDATSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTAGNVISVI
GSTETTGKMVPSSNGIANLESGVPQLIPRCAETSLRVLENVKKGGKSGASGQNASGSPTE
SLSENKICSPPKTPVSQAAATSAGGPNIGTEMNSLTPKSSPFVTRVPVYPSHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSSNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQIYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSMACQPPNEQRTVPLPREPCGHLKTSYDDQLRRKPEQW
AQYHSQKTPLVSSTLPMATQSPTPPSPLFSVDFSTEFSESVSDLSGTKFDEDRLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSEDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSCGSDST
SSACYIERERFIVTDLSAHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYIEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSRDDQLLNGTTIENGHSLKKHQKEPLEQKRQSLGEDLVILEEQKAVLPVTSCFS
QSITGSFSNASCLPISTSGTVGSLILKSAHSMSEDKNDFLKPIANGKMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacggagtttctgtcctgtccaatctgctacaatgag
tttgatgagaatgtgcacaagcccatcagcttaggttgctcacacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaagcatgtcctttcgaccagactgccatcaacacagac
atcgatgtgcttccagtaaactttgcacttctccagttagttggagcccaggtaccagat
catcagacaataaagttaagtaacctaggagagaacaaacattatgaggtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccactaagtggaggaaagggagttgctagt
ttgaatcagagtgccctgagccgtccaatgcaaaggaaactggtgacgctggtgaattgt
cagctggtggaggaggagggtcgtgttagagccctgcgggcagcacgctcacttggtgaa
agaactgtaacagaactgattttacagcaccagaaccctcagcaactgtctgccaatctc
tgggctgctgtcagggcacgaggatgccagtttctagggccagctatgcaagaagaagct
ttgaaacttgtgttactggcacttgaagatggctctgcactctcaagaaaagttttggta
ctctttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagcattggt
catgttgtgcaactactgtatcgcgcatcatgctttaaggtcacgaaaagggatgaagat
tcttctctcatgcaacttaaagaggaatttcggagttatgaggctttgcggagggaacat
gatgcccaaattgtccacattgccatggaagcaggacttcgaatatcaccagaacaatgg
tcttccctcctttatggtgacctggcacataagtcacacatgcaatccattattgacaag
ctccagtctccagaatcatttgcaaaaagtgtacaggagttgacaattgtcttgcaacgt
acaggtgatccagcaaacttaaacagacttaggcctcatttggagcttctggcaaacata
gatcctaatccagatgcaacttctccaacatgggagcagctggaaaatgcaatggtggca
gtgaagactgtggtacatgggctagtggactttattcagaattatagtagaaaaggtcat
gaaacaccacagccgcaaccaaatagcaaatataaaacgagtatgtgccgagatctgcga
cagcaaggtggatgtccacgaggaactaactgtacatttgctcactctcaggaagagctt
gaaaagtatcgtttgaggaacaaaaagatcagcgcaactgtgagaacattccctctccta
aataaagttggtgtcaacagcactgtctcaaccacagcaggaaatgtaatctctgtcata
ggaagcactgaaacaacaggaaagatggtgccgagttccaatgggattgcaaatctggaa
agtggtgttccccaattgattcctcgctgcgctgaaacctccttaagagttctggagaat
gtcaagaaggggggaaagtctggagccagtggtcaaaatgcctctgggtctcctacagaa
tcgctatctgaaaataaaatttgttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtggtcctaatattggaacggagatgaattctctgactccaaaatccagc
ccatttgtaaccagagtacctgtctacccttcacattctgataatgttcagtattttcaa
gatcccaggacacagttatcctatgaagttccacagtacccacagacaggatattaccca
ccacctccaacagtaccagctggtgttgctccctgtgttcctcgctttgtgaggtccagt
aatgttccagaatcctccctcccacctgcttccgtgccatatgctgatcattacagcaca
tttccccctcgagatcgactgaattctccctaccaacctcctcctccgcagccgtatgga
ccagttcctcccgtcccttctggaatgtatgctccagtgtatgacagcaggcgcatctgg
cgtccacagatctatccaagagatgacattattaggagcaattctttacctccaatggat
gtgatgcactcatctgtctatcagacatcattacgtgaaagatataattcactggatggg
tattactccatggcttgccaacctccaaatgagcagaggactgtgcctttaccaagggag
ccttgtggtcacttgaagaccagttatgatgatcagttaagacggaagccagagcaatgg
gcacaataccactctcaaaaaacaccgcttgtgtcctcaacccttcctatggcaacacag
tctccaacaccaccttctcctctcttcagtgttgacttcagtacagagttctcggagagt
gttagtgacttgagtggtactaaatttgatgaagaccgtctttcacactactcaccctgg
tcctgtggcactattggttcctgcataaatgccatcgactcagagcccaaggatgtaatt
gccaattcaaacgctgtgttaatggatttggacagtgaagatgttaagaggagagttcat
ctatttgaaactcaaagaagggcaaaggaagaagatcctataattccctttagtgatgga
ccgatcatctccaagtggggtgcaatctccagatcatcccgcacaggttatcacacaaca
gatcctattcaggccactgcttcccaaggaagtgctactaagcccatcagtgtatcagat
tatgtcccttacgtcaatgctgttgattcaagatggagttcctgtggctcagattctact
tcatcagcatgctatatagaacgggaaagattcatagttactgatctatctgctcacaga
aagcattctagtactggagatctactgagcattgaactacaacaagccaaaagtaattca
ttgttacttcagagagaggctaatgcactagccatgcaacagaagtggaattccctagat
gaaggcagtcgccttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
actgactatattgaagactgtgcagacacaaagccagatcgggacattgaattagagctt
tctgcccttgatactgatgaacctgatgggcaaggtgaacaaatagaggagatactggac
atacagctaggtatcagttctcgggatgatcagctgctcaatggaacaactatagagaat
ggacattcactcaagaaacaccaaaaggaacctttggagcagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaagcagtcctgcccgtaacttcttgcttcagc
cagtctatcacaggatcctttagcaatgcaagctgcctgcccatcagcacatcaggcact
gttggcagcctcattttgaaaagtgctcacagtatgtctgaggataaaaacgacttttta
aagcccattgcgaatggcaaaatggttaacagctga
DBGET
integrated database retrieval system
