Chelonoidis abingdonii (Abingdon island giant tortoise): 116817511
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Entry
116817511 CDS
T07367
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116817511 (SNAPC4)
03021 Transcription machinery [BR:
cabi03021
]
116817511 (SNAPC4)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
116817511 (SNAPC4)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
116817511 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SLIDE
Motif
Other DBs
NCBI-GeneID:
116817511
NCBI-ProteinID:
XP_032623605
LinkDB
All DBs
Position
Unknown
AA seq
1587 aa
AA seq
DB search
MAHYLGPAGDLLREREVMSPVDLHAEREKIRREIEELEKSLDPSIPSIEVLVSDSSLDSD
SDVDDLDNDDSDAHTEMEVEKEGGSSDDDNIDDNLPADPETCLQMNLVYQEVIQEKIEEV
NLLIAQNKEQQKEIMCEVGGPKMAKTGDSKLLPLNIFLGHFMKPYFKDKVSGIGPPANED
TREKTAQGIKSFEELLIKKWKSREKSLLNKSVISDRLQRLLQPKLLKLNYLNQKLEKAKN
EMEKKILEKQVKEAEREIEEINHLPEEALLGNRLDEHDWEKISNISFDGSRNAEELRKFW
QNWEHPTINKREWNEEEIEKLKEIAAKHNCLDWQTIAQELGTNRSAFQCLQKFQAYNKDF
KRKEWTKEEDQMLLQLVQEMRVGSHIPYKKIAYYMEGRDSMQLLYRWTKRVDPSLKKGFW
TPEEDAKLLAAVAKYGERDWYKIRTEVPGRSDAQCRDRYLNALHHDVKKGRWSLEEKEKL
IELVEKHGVGHWTKIASELPHRTGSQCLSKWKALIGAKKKSGPRKRLQKRRRVRRRSSTS
SESSSEDSEPELMNSSEGEIDSPSGFRGTVPGLDLWIPTRTDPANRRKAKHLISSLYCSK
SAYVKGRLKRVPATSAGGGRDRVPTDSAGLSTILKGIKYSPSTDLNLKDPEELVKEASIR
GEQVLKVTLEDVRRVLRRNTCSQRKCQDWLRKPYVPSSAVASGATPGTSVDQVLQGLQNT
KEKQYRRQREQFHRKNLERRLLMAVTPWVGNVLLPCTFRAERVASHQTKALVIQEQLQTV
TLGSTPVFTLFIQLFQIDTSGCMKVIRERKMKQSDLIRSMAGNTRRLQKPSCSSKNSSGL
SAQPRSQKVPAKGRARRPIALKAKENPAAVSADVPTPPTPRQKPKTVSELLREKRLRESR
AKKALQKTVILAPQVLVSPSVIIQHPVQQVIPAPQGGSEPQTAGLAGSRNAQAACVPVSL
PPFTPVMASVSSPKPVGSHSSPAPEFAERSCSSERRAKSERELNDAALGDVSKGEASQDR
PIGAGENGLSQGCKKAQAFSGSSAPVVLQNHAFVPQRIALMPSSAISLNPASMKSGPQET
SPSTSMTCAPALIRSQQNAVNLLPAILAPQGRSHMVPKNIMPITWVVTQQGLIPTSVQAL
VSVQSQGKQPAAGIVGSAAKNQSQTGETSAPRVPQMPPEASHPPIGCMSAQVLSPPLVEG
APSGKTVCLNPSTHSSSVTCLDPGHNSPSMTPPAPASLNSLSRMSDSSGERSAAPASLPD
EGAALHPSPVVLPQAKPPASTAWTDLLCSPSLPGPGESNNCSTLTGATSNPNILLERPDQ
LLACNNIVENSDAPGAQVTRNRPIFPKPQSTPKVDNSPGLPTPSAEKNLLDVSLLSLEDE
ASVKEWLRGKRGIPVPPLETSLAYLPPFLCNLKTLSRLLLQKKTLEQRVSCLGTSEEHND
GGAGTDLPAVRALVWQKLSDNPAYLLLKARFLAAFTLPAVLATLPPPSVTTTLSSSWQQC
SESDKEESSADKELMEVESCGKEPVEVPLDSKAGIVPGSEDADITNQGAAGEAPAVQSVS
GSGADVGEARVLQTRRSTRFRKRRKRM
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atggcccattacctgggcccggctggggatctcctgcgggagcgcgaggtcatgtcgcct
gtggatttacacgccgaaagggagaaaatccggcgggaaatcgaggagctagaaaagagc
ttggaccccagtatcccgagtatcgaagtccttgtgtcggattccagcctggactcggat
tccgacgtagatgatctcgacaatgatgattcagatgcccatactgaaatggaagtagag
aaagaagggggcagtagtgatgacgacaacattgatgataacctcccagcggacccagaa
acgtgtttacagatgaacctggtgtatcaggaagttattcaggaaaagatagaggaagtc
aaccttctgatcgcacaaaacaaagaacagcagaaagaaattatgtgtgaggttggtggg
ccaaagatggcgaagacaggagatagtaaacttctaccattgaatatattcttgggccat
tttatgaagccatacttcaaggataaggtatcgggaattggccctcctgccaatgaagat
acccgagaaaagacagcacagggcataaaatcctttgaggagctgcttataaaaaagtgg
aaaagcagagagaaaagcctgctgaacaaatcagtaataagtgaccgtttgcagcgtctg
cttcagccaaagttactgaagctcaactatttgaatcagaaactggaaaaagccaagaat
gaaatggaaaagaagattttggaaaagcaagtcaaagaagcagagcgtgaaatagaagag
atcaaccatctgccagaggaggccttattaggaaacagactggatgagcacgactgggag
aagatttccaacatcagttttgatggaagtcgcaacgcagaagagctgaggaaattctgg
cagaactgggagcatccgaccatcaacaagagggagtggaatgaagaggagatagagaag
ttaaaggaaatagctgcgaaacataattgtctggactggcaaactatagcccaggagctt
gggacaaatcgaagtgcattccaatgcctgcagaagtttcaagcctacaacaaagacttc
aagaggaaagaatggacaaaggaagaggaccagatgctcctacagctcgttcaagaaatg
agagtaggaagccacataccttacaagaaaattgcttattacatggaaggaagagattct
atgcagttactttaccgatggacaaagagagtggatcccagcctaaagaaaggattctgg
acgccagaggaagatgctaagttgttggcagcagttgctaagtatggagaacgtgactgg
tataaaattcggacagaggtaccaggaaggagtgacgctcaatgcagagacaggtattta
aatgcattacaccacgatgtaaagaaaggcaggtggagcttagaggaaaaagaaaagtta
attgaactggtcgagaaacatggtgtaggtcactggactaaaatagcttctgagttacca
cacagaaccggctcccagtgtctaagcaaatggaaagccttgattggtgctaagaaaaag
tctgggccgaggaaacgccttcagaagcgcaggcgagtgcggagacgcagttccacctct
tcagagagcagcagcgaggattcagagccggagctgatgaatagctctgagggagaaata
gactccccctcaggattcaggggtacagtgcctggcctcgatctgtggatcccgacaagg
acagatccagccaaccgcaggaaagccaaacacttgatttcctccctctactgttccaaa
agtgcttatgtaaagggacgcttaaaacgagttccagctacgtctgctgggggaggcagg
gacagagtcccaactgattcagcagggttaagtaccatactgaaaggtattaagtattca
ccttctactgacctcaatttgaaggatccagaagaactggtaaaggaggcttccataaga
ggagagcaagtgttaaaagttaccctggaagatgtgaggagagtgctaagaagaaatacc
tgctctcagaggaaatgccaagactggctacggaagccttatgtcccctcttcagcagtg
gcttctggagcgacaccgggcacatcagtcgaccaggtgctgcagggattacagaacact
aaggagaaacagtaccgtcgccagagagagcaattccacagaaagaatctggagaggagg
ctcctgatggcagtgactccgtgggtgggcaatgtcctactgccttgcacctttagagct
gagagggtggcgtcccatcagacaaaagctcttgttattcaagaacagcttcagacagtc
acactgggcagcactccagtgttcacgctcttcattcagctcttccagattgacactagt
ggctgcatgaaggttattcgtgagaggaagatgaagcagtcagacctcatcaggtccatg
gctgggaatacaaggcgacttcagaagccctcctgcagttccaagaactcttcaggcttg
tcagcacagccccgctcacagaaggtcccagcaaagggaagagccaggagacccattgcc
ttaaaagcaaaggagaaccctgcagctgtgtcagcagatgtccctactcctcccactccc
aggcaaaagcctaaaactgtctcagaattactgagggagaagaggctgcgggagtcccgg
gctaagaaagctttgcagaaaacggtgattcttgccccccaggtgttggtttcaccctct
gtgataatccagcaccctgtgcagcaggtaattcctgccccacaaggaggaagtgagcct
cagacagctggattggcaggtagcaggaatgctcaggcagcgtgtgtaccagtgtcatta
cctccatttactcctgtgatggcttctgtctcctctcccaaacctgtcggaagccattca
tctccagccccagaatttgcagagagaagttgctcctccgagaggagagcaaaatccgag
agagagctcaatgacgcagctttgggagatgtgtccaaaggtgaggcttctcaggacaga
cccatcggtgcaggggagaacggcctgtcccaggggtgcaagaaagctcaagcattcagt
ggcagctcagcacctgtagtcttgcagaaccatgcctttgtgccacagcggattgcattg
atgccatcttcagccatttctctgaaccctgcctccatgaagtcaggcccccaggaaacc
tctccctccacatccatgacttgtgccccagcactgatcaggtcacagcagaatgcagtc
aatctattgcctgctatcctagctccccagggaaggtctcacatggttcccaagaacatc
atgcccattacctgggtggtaacgcaacagggtttgatccccacctcggtacaagcattg
gtgagtgttcagagccaagggaagcagcctgcagctgggattgtaggcagtgctgccaaa
aatcagagtcagactggagagacctctgccccaagagtgccgcagatgccacctgaagca
agtcaccctcccatcgggtgcatgagtgcacaagtgctgagcccaccgttagtggaaggg
gcaccctcagggaagacggtttgcttaaacccttccactcattcctcatccgtaacctgt
ttggatcctgggcacaactcacccagcatgactcctccagctcctgcatctttaaacagc
ctgtcgaggatgtctgactcctctggagagaggagtgcagcaccagcaagccttccagat
gaaggagcagctctgcaccccagccctgtggtgttgccccaagcgaagcctcctgcaagc
actgcatggactgacctgctctgctcaccaagtctccctggcccaggcgagagcaataac
tgcagtacgctcaccggagccacctccaatccaaacatcctgctggaaaggccggatcag
cttctggcctgtaacaacatagtagagaactcagacgctcctggtgcacaggtaaccagg
aacaggccaatcttcccaaagccacagagcaccccaaaagtggacaactcccctgggttg
cccacgcctagtgccgaaaagaacctcctggatgtcagccttctctcccttgaggatgag
gcttcggtgaaggagtggctgagagggaagcgaggcatcccggtgcccccattggaaacc
agcttggcttacttgccacctttcttgtgcaacttgaaaacgctctccaggctgcttctg
cagaagaagacactggagcagcgtgtgtcgtgcctcgggacctctgaagagcacaatgat
gggggtgctgggactgatctgccggctgtcagagcgctggtgtggcagaaactcagcgat
aaccctgcctatctcctgctgaaagccaggtttttagcagcatttactctcccagccgtc
ctagcaactctgcctcctccctctgtgactacgactctctccagcagctggcagcagtgt
tcagagagtgacaaagaggagtcctctgctgataaggaattgatggaggtagaaagctgt
gggaaagaaccagtggaagtacccttggatagcaaagctggcattgtccctgggagtgag
gatgctgacatcactaatcagggtgctgcaggtgaagcgcctgctgtgcaatcggtctca
ggctccggcgctgacgtgggtgaggccagagttctgcaaactcggagaagtactcgcttc
aggaagaggaggaagcggatgtga
DBGET
integrated database retrieval system
