Chelonoidis abingdonii (Abingdon island giant tortoise): 116817576
Help
Entry
116817576 CDS
T07367
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
116817576 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cabi04040
]
116817576 (KCNMA1)
Ion channels [BR:
cabi04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
116817576 (KCNMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
116817576
NCBI-ProteinID:
XP_032623711
Ensembl:
ENSCABG00000006315
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQID
MAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALR
LIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNNQPLT
YWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYG
GSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKR
HFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPK
IRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAPGLSTMLANLFSM
RSFIKIEEDTWQKYYLEGVSNEMYTEYLSSAFVGLSFPAVCELVFAKLKLLMIAIEYKSE
KRESRSRKRILINPGNHVKIQEGTLGFFIASDAKEVKRAYFYCKACHDDITDPKRIKKCG
CKRLIYSKMSIYKRMKLACCFDCGRSERDCSCMSGSVHSNMDTLERAFPLSSVSVNDCST
SLRAFEDEHPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNEQIDNMDASVKKYDS
TGMFHWCPGKDIEKVILTRSEAAMTVLSGHVVVCIFGDAKSALIGVRNLVMPLRASNFHY
HELKHIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQN
NIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGLLRQP
SITTGANIPIITELAKPGKLLPLVSISQEKNSGTHILMITELVNDSNVQFLDQDDDDDPD
TELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALR
GGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDA
HLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSYSSSKKS
SSFHSIPSTANRQNRTKTRDSREKQNATRMNRMGQEKKWFTDEPDNAYPRNIQIKPMSTH
MANQINQYKSTSSLIPPIREVEDEC
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgtgaaagactgggcaggagtgatgatatctgcccagactctaaccggcaga
gtcctcgttgtcttagtctttgctcttagtattggtgctcttgtaatatacttcatagat
tcgtcaaacccaatagaatcctgccagaatttctacaaagatttcacattacagatagac
atggctttcaacgtgttcttcctactctacttcggcttgcgtttcattgcagccaatgac
aagctgtggttttggctggaagttaactcagtagtagatttcttcacagtccctcctgtg
tttgtgtcagtgtatttaaacaggagttggcttggtttaagatttttaagagcccttaga
ctgatacagttttcagaaattttgcagtttctgaatatcctaaaaacaagtaattccatc
aagctggtgaatctgtgctctatatttatcagcacatggctgacagcagctgggttcata
catttggtggagaactcaggggatccatgggaaaatttccaaaataaccaaccacttaca
tattgggaatgtgtctatttactaatggttacaatgtccactgttggctatggagatgtt
tatgcaaaaacaacccttggtcgccttttcatggtcttcttcatccttgggggattggcc
atgtttgccagctacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggt
ggttcctatagtgcggttagtggaagaaagcacatagttgtctgtggtcatataacactt
gaaagtgtgtccaacttcctgaaggacttcctgcacaaggacagggatgatgtgaacgtg
gaaatcgtctttctgcataatatctcccctaaccttgagctggaagctctttttaaacga
cacttcactcaggtggaattttatcagggatcagttctcaatccgcatgacttggcaaga
gtaaagatagagtcagcagatgcatgcctaatccttgccaataaatactgcgctgaccca
gatgctgaagatgcctccaatattatgagagtaatttccataaagaattaccatccgaag
ataagaattatcactcagatgctgcagtatcataacaaggcccatctgctaaatatccca
agctggaattggaaagaaggggatgacgcaatctgtcttgctgagctcaagctgggtttc
atagcccagagctgcctggcaccgggcctctcgacaatgctagccaatctcttctctatg
aggtcattcataaagattgaggaggatacgtggcagaaatactatctagaaggagtctca
aatgaaatgtatacagaatatctatctagtgcctttgtgggtctgtctttccctgcagtt
tgtgaactggtgtttgcgaagctaaagctcttaatgatagccatagaatacaagtcagaa
aaacgggaaagcagaagccgaaagcgtatattaatcaatcctggaaaccatgtcaagatt
caagaaggtactttaggattcttcattgcaagtgatgccaaagaagtgaaaagggcatat
ttttactgcaaggcctgtcatgatgacatcacagatcccaaaaggataaaaaaatgtggc
tgcaaacggctgatctattccaagatgtccatctacaagagaatgaaactggcatgttgt
tttgattgcggacgctctgagcgtgactgctcttgcatgtcaggcagtgtacatagtaac
atggacacccttgagagagccttcccactttcttctgtctctgttaatgattgctccacc
agtttacgtgcctttgaagatgaacatccgtcgacactgtcacccaaaaaaaagcagcga
aatggaggcatgagaaattcacccaactcctcgcccaaactgatgaggcatgaccccttg
ttaattcccggcaatgagcagattgacaacatggatgccagtgtgaaaaaatatgactcc
acggggatgtttcattggtgtccaggaaaggacattgaaaaggtcatattgacccggagt
gaagcagcgatgacagttttaagtggtcatgtggtcgtttgcatatttggggatgctaag
tctgcattgattggagtaagaaatctagtgatgccattacgagccagcaactttcactac
catgaactcaagcacattgtatttgtgggttcacttgaatatctgaaaagggaatgggag
acactacataacttccccaaggtttcaatcttgcctggtacgccattaagtcgggctgat
ttaagggctgtcaacatcaacctctgcgacatgtgcgttatcctgtcagccaatcagaat
aatattgatgatgcttcgctgcaggacaaggaatgcatcttggcgtcactcaacatcaaa
tctatgcagtttgatgacagcattggggtcttgcaggctaattcccaagggtttacacca
ccaggaatggataggtcatctccagacaacagtccagtccatggtctgttacgtcaaccc
tcaatcacaacaggagccaacattcctattataacagagctagctaagcctggcaaactt
ctgcctttggtttcaatcagtcaggaaaaaaacagtggaacccacatactaatgataact
gaactggtaaacgattcaaacgttcagtttttggaccaagatgacgacgatgacccagac
acagaactgtatcttacacagccatttgcatgtggaactgcattcgccgtcagtgtattg
gactccctcatgagtgctacatacttcaatgacaatatcctcacattgatacggactttg
gtaacaggaggagccacaccagagctggaagcgctgattgctgaggagaatgcactgaga
ggaggctacagcacgccccagacacttgcaaacagggacaggtgtcgagttgctcagttg
gctttgtatgatgggccatttgcagacctaggggatggtggttgttatggagatctgttt
tgtaaagcactgaaaacatacaatatgctttgttttggaatttaccgattgagggatgca
catctaagcacaccaagccaatgcactaaacgctatgttatcacaaatccaccatatgag
tttgagcttgtgcccacagacttgatcttctgtttgatgcaatttgaccacaatgctggc
cagtcccgggccagtctctctcattcctcccattcttcctactcctccagcaaaaagagc
tcatcgtttcactctatcccatcgacagcaaaccgacagaaccgcaccaagactcgggac
tcccgggaaaaacagaatgcaacaaggatgaatagaatgggccaagaaaagaaatggttt
acagatgagccggataatgcctatcccagaaacattcaaatcaagcccatgagcactcat
atggccaatcagatcaatcagtataaatctacaagcagcttgataccaccaatcagagaa
gttgaagatgaatgttga
DBGET
integrated database retrieval system
