KEGG   Chelonoidis abingdonii (Abingdon island giant tortoise): 116817854
Entry
116817854         CDS       T07367                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cabi  Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03030  DNA replication
cabi03410  Base excision repair
cabi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cabi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116817854
   03410 Base excision repair
    116817854
   03420 Nucleotide excision repair
    116817854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cabi03032]
    116817854
   03400 DNA repair and recombination proteins [BR:cabi03400]
    116817854
Enzymes [BR:cabi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     116817854
DNA replication proteins [BR:cabi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    116817854
DNA repair and recombination proteins [BR:cabi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      116817854
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 116817854
NCBI-ProteinID: XP_032624194
Ensembl: ENSCABG00000011905
LinkDB
Position
Unknown
AA seq 2091 aa
MLSSALIGGSLTMDDEGPSKKTVNQMDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYR
GSIYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITN
REIVSEDIEDFEFTPKPEYEGPFCVFNELDEAHLIQRWFEHVQETKPTIMVTYNGDFFDW
PFVEARAAVHGMNMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAK
AKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEP
DEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALES
GVFRSDIPCRFKMNPVAFDFLLQRVEKTLRHAIEEEEGLPLDQVTNFQEVCEEIKVKLNS
LKDIPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGANCQRRMTW
QWRGEFMPASRSEYHRIQQQLESEKLPPLYPDGPPRAFHELSREEQAKFEKKRLADYCRK
AYKKLHVTKVEERITTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAATEMGDAT
EVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQAREL
IEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNILVKEGFTNDQ
YQELVDPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELK
GFEVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAANMPDSEL
FELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPV
TERAIPLAIFQAELTVRKHYLRKWLKSPSLQDFNIRTILDWDYYIERLGSTIQKIITIPA
ALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQVTANQPQEDTPCTQI
ADMEDFGAAKPVQPSVPIASKRKRVPVAGESQEMSQNLELTQSWREILGPPPPTGTTKEE
RLAWLRYHKKKWELQARQRQARRKKRRLEDGEVVLGGGVIRDGSSKGLSSYLRRTARSIL
DLPWQIVQVAETSQPGLFRLWAVIGSDLHCIKLSVPRVFYVNQRVAKPEEGAAYRKVNRV
LPRSNLLYNLYEYSVPEDMYQEHINEINAGLSAPDIEGVYETQVPLLLRALIHLGCVCMV
SRQLVRHFTSREAETFALEHLEMRSLAQFSYLEPGSIRHIYLYHNSQGSKALFGLFVPSQ
RKASVFVLDTVRSNQMPNLTNLYSTERSTMLEKVGGELLPPGKHTFEVRAETDLKTVSRA
IQRLLLGYKDERRGPTLIAVQSNWDVKRLVSGIPVFEEFPLVPMRVTDDISYAVLDWQRH
AARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGSDLFFSRHLRCHNHLLWLS
PTARPDLGGKEADDNRLVMEFDDRASVEINNPGCYSTVCLELDIQSLAVNTVLQSHHIND
MEGASSMSISFDVIQQASLEDMVTGNQAASIPASYDETALCSNTFRILKSMVVGWVKEIT
QYHNVYADNQVIHFYRWLRSPASLLHDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYAN
FNRIILCTKKRRIEDAIAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDPANYGGIKG
RIPSGETGTSKRQAGAEEGDEDEEEEAEEEEEPGEASVEDLLENNWNIVQYLPQAASCQN
YFLMIVSAYIVAVYHSMKEEMRRSAPGSTPVRRRPSSQASQEAVGEVGTMPGVITFSQDY
VSNELTQSFFTITQKIQKKVTGSRHATLPSDMFPALPGSYLPLNNPALEFIKYVCKVLSL
DANITNQVNKLKRDLLRLVDVGEFSEEAQFQDPCRSYVLSEVICRNCNFCRDLDLCKDPS
PCQDAGVPPSWVCSNCQAEYERGSIEAALVEALQKKLMAFMLQDLVCVKCKGVKETHMPI
YCTCAGDFTLLIQTKAFVEQINVFHSIARHYGMTHLLETIEWLLQLNPQLR
NT seq 6276 nt   +upstreamnt  +downstreamnt
atgctgtcgagtgctctgatcggtggcagcctgaccatggatgatgaggggccctcgaag
aagactgtcaaccagatggacaacatagtggacatgcgggagtacgatgtgccgtaccac
atccgcctgtccatcgacctgaagattcatgtggctcattggtacaatgtccgttatcgg
ggcagcatctaccctccggagatcactcgccgagacgacctggtggagcgaccggatcct
gttgtactggcctttgacattgaaaccaccaaactccccctgaagttccctgatgcagag
acagaccagatcatgatgatctcctacatgattgatggccagggctacctgatcacaaac
agggagatcgtctctgaggatattgaagattttgagtttactcccaagccggagtatgag
ggtcccttttgtgtcttcaacgagctggatgaggcccatttaatccagaggtggtttgaa
catgtccaggagaccaaacccaccatcatggtcacttacaatggggacttctttgactgg
ccctttgtggaagctagagcagcagtgcatggaatgaatatgtatcaagagatcggattc
cagaaggacagccaaggggagtacaaagcctcccagtgcatccacatggactgtctaagg
tgggtgaagagagacagttacctccccgtaggaagccacaacctgaaagcagcagccaaa
gcaaagctgggttacgacccagtggagctggaccccgaagagatgtgccggatggctaca
gaagagcctcagacgctggccacttactcggtgtctgacgcagttgctacctactacatg
tacatgaagtacgtgcacccgttcatcttcgcgctgtgcaccatcatccccatggagccc
gacgaggtgctacggaaaggctcagggacgctgtgcgaggcgctgctcatggtccaggcc
tatcacgccaacatcatcttccccaacaagcaggagcaggagttcaacaagctcacagag
gatgggcatgtgctagactcggagacctacgtcgggggccatgtggaggcgctagagtca
ggggtcttccgcagcgacatcccctgccgctttaaaatgaaccctgttgccttcgacttt
ctgctgcagcgcgtggagaagaccctccgccatgccatcgaggaggaggagggtttgccg
ctggatcaagtcaccaacttccaggaggtatgtgaggaaatcaaagtcaagctgaactcc
ctgaaggacattcctaaccggatcgagtgtcccctcatctaccatctggatgtgggggcc
atgtaccccaacatcatccttacaaacaggctgcagccctcggcaatagtggatgaggcc
acatgcgctgcctgtgactttaacaagccaggtgccaattgccagcgccggatgacctgg
cagtggagaggggaattcatgcccgcgagccgcagcgagtaccaccgcatccagcagcag
ctggagtcagagaaactgcccccgctctacccagacggcccgcctcgtgcttttcacgag
ctgtcccgtgaggaacaggccaagtttgagaagaagcgactggcggattactgccgcaag
gcctataagaagctgcacgtcaccaaggtggaggagcgcatcaccaccatctgtcagcgg
gagaactcattctacgtggacaccgtgcgagccttcagagaccgtcgctacgagttcaag
ggcctgcacaaggtgtggaagaagaagctgtctgccgccacggagatgggagacgccacc
gaagtgaaacgctgcaagaacatggagatcctgtacgactcattgcagctggcacataag
tgtatcctcaactccttctacggctacgtgatgcgcaaaggggcccgctggtactccatg
gagatggccgggattgtctgcttcactggagcaaacatcatcacccaggccagggagctg
atcgagcagattgggaggccgctggagctggacacagacggaatctggtgcgtccttccc
aacagtttcccagaaaactttgtcatcaaatcaaccaatgcaaagaagcccaaggtgaca
atctcctatcccggtgccatgctgaacatcctggtgaaggaaggcttcacgaatgatcag
taccaggagcttgtggacccggcttcgctcacctacgttacccgctcagagaacagcatc
ttctttgaagtggatgggccatacctggccatgatcctcccagcctccaaggaggagggc
aagaaactgaagaaacggtacgcggtgttcaatgaggacgggtccctggctgagctgaag
gggtttgaagtgaagcggcgaggggagctgcaactggttaagatcttccagtcgtcagtg
ttcgaggccttcctgaagggcaccacgctggaggaggtctacgcctccgtggccaaggtg
gccgactactggctggatgtgctttacagcaaggctgccaacatgccagactctgaatta
tttgagctgatttccgagaaccgctccatgtcccgcaagctggaggattatggggagcag
aaatccacctccatcagcacggccaagcgcctggccgagttcctgggggatcagatggtg
aaggacgctgggctgagctgtcgattcatcatctccaagaaaccggaagggtcccctgtt
accgagagggccatcccgctggccatcttccaagccgaactcaccgtgcggaagcactac
ctccggaaatggctgaagagcccatccctgcaggacttcaacatccggacaatcctggac
tgggactactacatcgagagactgggcagcaccatccagaagatcatcactatccctgcg
gcactgcagcaggtgaagaaccctgtgccccgtgtccgacaccccgactggctgcacaag
aagctcctggagaagaatgacgtgtacaagcagaagaaaatcaatgagctgttcactagt
gaaggcaagagacaggtcactgccaaccagccccaggaggacaccccctgcacacagatt
gccgacatggaggattttggggctgccaagcccgtgcagccatcggttcctatcgccagt
aagcgcaagcgggtcccggtggcaggggagagccaggagatgtctcagaacctggagctg
acccagtcctggcgggagatcctgggcccgcccccgcccactggcaccaccaaggaggag
cgcctggcctggctccggtaccacaagaagaagtgggagctgcaagcacgtcaacgccag
gcccgccggaagaagcggcggttggaggatggcgaggtggtcctgggtgggggtgtgatc
cgggatgggtcctccaaggggctcagcagctacctgcgcaggacagcccgcagcatcctg
gaccttccctggcagattgtgcaggttgctgaaaccagccagccgggcctgttcaggctg
tgggccgtcatcgggagcgacctgcattgtatcaagctgagcgtcccacgtgtcttctac
gtcaaccagcgggtggccaagccagaggagggagccgcctaccggaaggtgaacagggtg
ctgccccgttcgaatctcctctacaacctgtatgagtactccgtccccgaggacatgtat
caagagcacatcaacgagatcaacgccggcctgtctgccccagacatcgagggagtgtac
gagactcaggtgccattactgctgcgcgctttgatccatctgggctgcgtgtgcatggtc
agcaggcagctggtcaggcacttcaccagccgcgaggctgaaacctttgccctggagcac
ctggagatgcgctcgctggcccagttcagctacctagagccagggagcatccggcacatc
tatctctatcacaactcccagggcagcaaggcactctttggtcttttcgtcccatcgcag
cgcaaggcctctgtcttcgtgctggacacggtgcgcagtaaccagatgccaaacctcacc
aacctgtactcaacggagcgcagcaccatgctggagaaggtgggcggggagctgctccct
ccgggcaagcacacctttgaggtgcgagccgagaccgacctcaagacagtttccagagcc
atccagcgcctgctgctgggctacaaggacgagcgcaggggccccacgctgatcgctgtg
cagtccaactgggacgtgaagcggctggtgagcgggattcctgtcttcgaagagttcccc
ttggttcctatgcgggtaacagatgacatcagctatgccgtcctggactggcagcgccat
gctgcccgccgcatgatccgccactacctcaacctagacacctgcctgtcgcaggccttt
gagatgagcaggtactatcatatccccatcgggaacctccccgacgacatctccaccttc
ggctccgacctcttcttctcgcgccacctgcgttgccacaaccacctgctgtggctctcg
cccacggcccgcccggacctcgggggcaaggaggcggacgacaaccggctggtcatggag
ttcgacgacagagcctcggtggagatcaacaacccgggctgctattccaccgtgtgcctg
gagctggacatccagagcctggctgtgaacaccgtcctgcagtcccatcacatcaacgac
atggagggagcctccagcatgagcatcagcttcgacgtgatccagcaggcgtctcttgag
gacatggtgacagggaaccaggccgccagcatcccggccagctacgacgagaccgccctc
tgctccaacacgttcaggatcctgaagagcatggtggtgggctgggtgaaggagatcaca
cagtaccacaatgtctatgccgacaaccaagtgatccacttctaccgctggctccgctcg
ccggcctccctgctgcacgacccagcactgcaccgcaccctgcacaacatgatgaagaag
ctcttcctgcagctggtggctgagttcaagcgactcggctcttccgtggtttatgccaac
ttcaaccgcatcatcctatgcaccaagaaacggcgcatcgaggacgccattgcctacgtg
gagtacatcacgaacagcatccactcgaaggagatcttccactccctgaccatctccttc
tcccgctgctgggagttcctgctctggatggacccagctaactacggcggcatcaagggg
agaattccctctggggagacgggcaccagcaaaaggcaagcgggtgctgaggagggcgat
gaggatgaagaggaggaggctgaggaggaggaagagccgggggaggccagtgtggaggat
ttgctggagaacaactggaacattgtgcagtacctgccccaggcagcctcctgccagaac
tacttcctcatgatcgtgtctgcctacatcgtcgccgtgtaccacagcatgaaggaggag
atgcggcgcagcgcccccgggagcacgcctgtcaggaggaggcccagcagccaggcctcc
caagaggctgtgggcgaggtgggcaccatgcctggcgtgatcaccttctcgcaggactac
gtctccaatgagctcacccagagcttcttcaccatcacccagaagatccagaagaaggtg
actggctcccgccatgccacgctgccctcagacatgttcccagcgctgcccggatcctac
ctgccgctcaacaacccggcactggagttcattaaatacgtctgcaaggtgctgtctctg
gatgccaacataaccaatcaggtgaacaagctgaagcgggacctgctgcgcctggtggac
gtgggtgagttctcggaggaagcccagttccaggacccctgccgctcctacgtgctctcc
gaggtgatctgccgcaactgcaacttctgcagggacctggacctctgcaaagacccaagc
ccctgccaggatgccggtgtgcccccaagctgggtgtgctccaactgccaggcggagtat
gagcgcggctccatcgaagcggccctggtggaagccctgcagaagaagctgatggccttc
atgctgcaggacctggtgtgtgtgaagtgcaaaggcgtgaaggagacacacatgcccatc
tactgcacttgtgctggagacttcaccctgctgatccagaccaaggccttcgtggagcag
atcaacgtcttccacagcattgcccggcactacggcatgacccacctgctcgagaccatc
gagtggctgctgcagctgaacccgcagctccggtga

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