Chelonoidis abingdonii (Abingdon island giant tortoise): 116818140
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Entry
116818140 CDS
T07367
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi00531
Glycosaminoglycan degradation
cabi01100
Metabolic pathways
cabi04142
Lysosome biogenesis
Module
cabi_M00076
Dermatan sulfate degradation
cabi_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
116818140 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
116818140 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
cabi02042
]
116818140 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
cabi00536
]
116818140 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cabi00537
]
116818140 (SPAM1)
Enzymes [BR:
cabi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
116818140 (SPAM1)
Bacterial toxins [BR:
cabi02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
116818140 (SPAM1)
Glycosaminoglycan binding proteins [BR:
cabi00536
]
Heparan sulfate / Heparin
Enzymes
116818140 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cabi00537
]
Enzymes
116818140 (SPAM1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_56
PH_9
Motif
Other DBs
NCBI-GeneID:
116818140
NCBI-ProteinID:
XP_032624725
LinkDB
All DBs
Position
1:complement(44336941..44344127)
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AA seq
570 aa
AA seq
DB search
METLRQVQSFGSFVASNRTPWLVFIIILVTCCSSLHIRARPLISNSPFLSIWNAPTEVCT
EKTRVQLDMRLFHLVGSTLKTSTEQSITIFYAKRLGNYPYIDENTGETFNGGIPQLCSME
HHLKKARDDINFFMPSDEQVGLAVIDWENWRPLWIRNWKSKDIYRQVSVEFVQQKDLSLS
ETQTRTLAKMEFEAAAKSLMLQSLKLGISMKPNHLWGYYLYPDCYNYDYKQNPHNYTGSC
LDIEIARNNELNWLWEESTALYPSVYLETALRSSKNAPLFVRNRVQETIRVSNVSNSTCP
LPIFVYTRPVFTDFNQEYLSQDDLVNTIGESAALGVSGIVIWGDLNLTLSVNTCRTLDSY
LRHTLNPYIINVTMAAKICSQILCHDSGACARKNWNSSDYLHLNPENFVIQMSRNGKYFI
QGQPSFQDLQQFIEKFYCRCYAGYNCEPSVDINDIHYINACISEDICVQVSLNSLSNVEA
SGGRASSSTSIFSSTPQRNITLPAHNATGGFQQTIWNNTFNVSTAGHINAPTNGSGDLKI
TNTHSFSGSSSDEMKILDVVCLILILRYLI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccctaaggcaagtccaaagctttggtagctttgttgcctctaacagaacaccc
tggctggtgttcatcattattctagttacttgctgctcatctttgcatataagagcccgt
cctctcatctccaattctcctttcctctccatctggaatgctcctacagaggtttgcact
gagaagactcgagtgcagctggatatgagactcttccacttggtaggaagcacactaaag
acatccactgagcagagtattactatattctatgctaagaggcttggcaattatccttac
atagatgagaacacaggtgagacatttaatggtgggatcccccaactctgttccatggag
catcatttaaagaaagccagagatgacattaattttttcatgccttcagatgaacaggtt
ggcttggctgtcatcgactgggaaaactggaggccactgtggatacgtaactggaaatcg
aaagacatttacagacaggtgtctgttgagtttgttcagcaaaaagatttaagcctatca
gaaacccaaaccaggactttagccaaaatggaatttgaagctgcagcaaaatcacttatg
ttgcaatctttaaaactgggaatatcaatgaagccgaatcatttgtggggatattacctt
taccctgactgctataactatgattacaagcaaaatccccacaattatacaggaagctgt
ttagatattgaaatagcaagaaataatgagcttaattggttgtgggaggaaagcacagca
ctttacccatctgtctatctggaaacggccttgagatcttcgaaaaatgcaccactcttt
gttcgtaatagagttcaagaaaccataagagtttctaatgtttcaaattccacctgtcca
cttcccatttttgtatatacacgtccagtattcacagatttcaatcaggaatatctctct
caggatgatcttgtaaataccattggagaatctgctgcattaggggtgtctggaattgta
atctggggagacctgaatttaacattgagtgtgaacacttgcaggactctggacagctac
cttaggcacactctgaacccttacatcatcaatgtaacgatggcagccaaaatctgtagt
cagatattatgccatgactctggtgcatgtgcacgaaagaactggaactccagtgactat
cttcatctgaacccagagaattttgtcattcagatgtcaaggaatgggaaatatttcata
caagggcagccatcatttcaggatctgcagcaatttatagaaaaattttattgccgctgt
tatgcaggctacaattgtgaacctagtgttgatataaatgacatccactacatcaatgcc
tgcatttcagaagatatttgtgttcaagtatctttaaattcactttctaatgtagaagcc
tctgggggcagagcctcttctagcacgagtatattttcatctaccccacagagaaacata
acattacctgcacataatgcaacaggaggttttcagcaaactatttggaataacacattc
aatgtatctactgcaggacacatcaatgccccaactaacggtagtggtgatttaaagata
accaatactcatagcttcagtggttcatcttctgatgagatgaagatattggatgtggtt
tgtttaattctaattttgagatacctaatctaa
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