Chelonoidis abingdonii (Abingdon island giant tortoise): 116818249
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Entry
116818249 CDS
T07367
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like isoform X1
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cabi00535
]
116818249
04091 Lectins [BR:
cabi04091
]
116818249
Proteoglycans [BR:
cabi00535
]
Cell surface proteoglycans
Others
116818249
Lectins [BR:
cabi04091
]
C-Type lectins
Others
116818249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
116818249
NCBI-ProteinID:
XP_032624908
LinkDB
All DBs
Position
Unknown
AA seq
2402 aa
AA seq
DB search
MASGWRSPGGGLASALLLLLALSLRALAVSFYGDSYVELNIAESSTRTSLQLRFRTSKPH
GLLFLAAGNDDHCSVELHSGYLQLRMNFGAGERVLHSQRSSRLNDLAWHLVELYHENDNV
TLVLDKHYRTSTKMPGILYQLNIERGLYVGGSGTLDVPYLDRALTNFRGCIDDVLFNQHE
ILTSLRPYPGFRNVYEVSLGCSDEFFASEDEPISFFSSKSYVSFQLWNVQGEGCLECAIQ
TSAQRGLLLYHSGRAGDFIAMEIENGLIKAHIGKSKSRMQLSSLKSVSDNKWHSIELKFT
AQYLQLMLDGETVKTTLPSHSKIPLLKGPLFVGGVDDSTRVEVIKLELTSVSGKYARGGS
FKGCIRDLKVNSEKRSLKNVLVTKDVSAGCKTENSFKTNSFVVTTEKSPLVTTASTSVNF
PEISKPQGKDDSGHFLVLNNLIVPEGGQAPLESKHIKVNLEFKKLGVRQSQIFFKIKVQP
SHGYLRLGVEPEQEKGTFTMLDLWQGRVLYVHDGSEDTYDNFTLSISASSKKDIPPYLQG
HEQYVFRITITPTNDVPELMLPEGNVFLLLENSKKRLTADLIKVSDQDTDSANLSLSVLG
NLNTDAGFLENSKNPGRAIITFSNEDLKEGNIFFVHTGVKNSRIVLRASDGEKMSNTVVL
RVMAVPLDYKVVNNTGIKVLQGNATLITLSHLAVETNAIQQKMEIRYEITESPQFGEIQR
QHSSREWKQVNIFSQRSIERSRVRYYSIFKALQLENVTDHFKFKVHIGNTISDELMFPIT
VKWLRYNLLKHVPLEIEKTKKKCLNSDNLFAVMMDIEIPENELNYKLLSLPKKGQMLLKN
QALKKNSTFSQKSIIDHEVEYELINRPHENTQDSFRFLVFTKYLESNVYDFKINIKAELT
SIILTNNGLTITEGEGALITKSRLFAQTMDNKAFQYKVTKSPQHGKLKLINFSDSPESND
NLTTFSNQDIMAERLMYVHDDTETMYDEFLVVASTRESGEWVSSAAGTEPLSAEIRFNIT
VELKNDEKPVRVVDKVFHVVKNGQRLLTLADLCYHDPDSDFDDGQLLYTRRGIPNGDLTL
VNDNTHSLYQFKQEDLEQKRVLFTHRGADYGRFVLFITDGKHYTSSLLEVSASDPYVRLA
NNTGLLVQKGKERTITTTNLSAITNQDIRRDHEITYELFLSPKHGRIFVNNLATDSFTQL
DLKRGHVIYRHDDSNNLVDTFNFTVYAKDIHQDAGMHVRMYLESHQRPPKIVHNNNLLVE
EGKPVKISKGKLQVVHENSSPSEIVFTLRALPVHGYIRKFASEEGYLGAEQKPVLTFTQQ
DIDDGNVQYVQTVSDQLQDHFSLDVTNGIRVVSEIEISVDIIPKLIPLEVQNFTVIEGGS
KALVEDYLKISNQHFTGLSCEFILVEPPKNGHVGNSRFPGVKLTKFTKKQVEQELIYYIH
DDSEGVSDNFTVIANNTELWKQSLPQTIFVTVTSVNDETPVISTNKILRVWVGSVTEITV
DDLCAEDKDSSASELVYSITPPSNGHLALKSSPNKSILNFTQAHIMEGQLVFVHNGAMSG
GFNFQVTDGLNFAPRQIFSITARTLVISLEIKKGLRVFPGSRKIISAHDLKAVTNDAANT
GNRTITFTIVRAPKLGRLIRIDTDNTTQDISTFTQSMVDEGLIIYEHTHNEAVGWSAEDY
FTFTVSSPPAALDLQVFHVAISYEINRHDQSSRLLANTGAIVQEGGKVLINKTNLDASNL
LVKLPEVQRSIYEVRYQVISLPQHGIIVAGERNITEEKPNFSQYILNKFGIIYMHDNSES
LADHFTFAVWLNLKSKSARKPDTDVLEEIFNITIVPVNDQVPELKTKGLRLKVLQGDTSV
LGPENLKVEDLDNSPGEIKYTVISNPTNGHLAMMNDLSTSIQDFTQADVDSGRVWFVQDR
SSSSGVFYFSVTDGKHRPLYKLFSLEVILVSLTLVNLTDVVLPQGQTSVTITNVQLSATT
NGKSTDISYEITVPFKCGHLLIGNEQVNKFEQADLHSGRLSYFMTNLSASRDILEFMLFT
SESNLTGQVLNIIARPLVKAASDLKIPNEMVYKLRIKDLDATELANLTNSNPKFEVTVPP
AHGRIVRRRSINDATFVGINLFTQNDIDRGVVLVDVHANLTGIDMLNDSFTFILRADDVQ
PAVGYFQYVIMPYDPLFVQRFTSHVPFLTHTDTLKIHTTSKDEPPVSQQDEGHTEALGKT
VQIRWQNRNRWGNQNEEDSLLNGEPVESRSARTKTTVKANAKSPSVKPRESSNPLSIIIP
LASVALLLIVAVISVCFFLMCHKTEKAKSLNKNQTQSIPSIPGLSPERSLSVPMVTVTPL
PKGAENTTATPFVAVRCKQLLPTPVASAEKNSLQNNWLNLDPEMLQHCRKTNPTLKRSQY
WV
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggctggaggagtcccggcggcggcctcgccagcgccctgctcctgctgctc
gcccttagcctacgggctctcgcagtatcattttatggtgatagctacgtggagctgaac
attgcagaatcatccactcgaacatcactgcagttacgatttcgaaccagcaagccacat
ggattgctttttcttgcagctggaaacgacgatcattgttcggtggaactgcactcagga
tatttacagttgagaatgaactttggagcaggggaacgagtgctgcattctcaacggagc
tccaggctaaatgatttagcctggcacctggttgaattatatcatgaaaatgataatgtc
acactggtacttgataaacattatagaactagtacaaaaatgcctgggattctatatcaa
ttaaatattgaacgtggactttacgttggtgggagcggtacccttgatgttccttacctt
gatagagcactaaccaatttccgaggatgtatcgatgatgtgttattcaatcagcatgag
atcttaacgtccctgagaccttatcctgggttcagaaatgtttatgaagtgtcactagga
tgcagtgatgaattctttgcaagtgaagatgagcctatcagtttctttagttccaaatcc
tatgtttctttccagctgtggaatgtccagggtgaaggatgcttagagtgtgcaatacag
acctcagctcagcgaggcttgctgctttatcattctggacgagcaggagatttcattgca
atggaaattgagaatggactaattaaggcccatattggaaagagtaaaagtagaatgcag
ctttcttctcttaagtcagtcagtgataataagtggcactccattgagttaaaatttacc
gcacaatatttgcagctgatgttagatggagaaacagtgaaaacaacactaccttcccat
agcaagataccccttcttaaagggccactctttgtaggtggtgtagatgacagcacacgg
gtagaagtgataaagttagagctaacctcagtttctggaaaatatgccagaggaggatcc
ttcaaaggttgcataagagacctgaaagtcaattcagaaaagagatcattaaagaatgtt
ctagttacaaaggacgtttcagctggatgcaaaacagagaattcttttaagacaaattct
tttgtagtgacaacagaaaagtctcctcttgtaacaacagcctccacttctgtcaatttt
cctgaaatttccaaaccccaaggcaaagacgatagtggccatttcttggttctaaataac
ttgattgtcccagagggtggacaagctccacttgaatctaaacatattaaagtaaattta
gagtttaagaaattaggggttcgtcagtcacagatcttttttaaaataaaggtgcagccc
tctcatggttacttgaggttaggggttgaaccagagcaggagaagggcacgtttacaatg
ttagacctgtggcaaggaagagtgctatatgtccatgatggttctgaggacacttacgat
aattttactctttccatttctgccagtagtaaaaaggacatacctccatatctgcaagga
catgagcaatatgtttttaggattaccatcactccgacaaatgatgttcctgaacttatg
ctccctgagggaaacgtatttcttttgttagagaactcaaagaaacgcttgactgctgac
ctgataaaggtttcagatcaagacacagattctgccaatctcagtctttcagtacttgga
aatctgaatacagatgcaggatttttagaaaattccaagaatcccgggagagccattatt
actttttctaatgaggacttaaaagaaggcaacattttctttgtccacactggggtcaag
aactcgagaattgtgctgcgagcaagtgatggagagaaaatgagcaacacagttgtgttg
cgtgtcatggctgttcctttggattataaagtggtcaataacacaggaataaaagttcta
caaggcaatgcaactttgatcacactcagccacttggcagttgaaacaaatgccatccag
caaaagatggagatacgatatgagatcacagaatcaccccaatttggtgaaattcaaagg
cagcattctagcagagagtggaagcaagtaaacattttttctcagcgctctattgagcgc
agccgtgtgaggtactatagtattttcaaagcattgcagctggaaaatgttacagatcac
tttaaatttaaggttcacattggaaacacaatcagtgatgagcttatgtttccaatcaca
gtgaaatggttgaggtataatttattgaaacatgttcctctagaaattgaaaaaacaaaa
aagaaatgtctgaattcagataatctttttgctgtgatgatggatatagaaatacctgaa
aatgaacttaattataagttgttgtccttacccaagaaagggcaaatgctccttaagaac
caagccttgaaaaaaaattcaacttttagccaaaaaagcattatagaccatgaagtagaa
tatgaattaattaacagaccccatgagaacactcaggattcatttagatttctagttttt
acaaagtatttggagtcaaatgtgtatgatttcaaaatcaacattaaagcagagctgaca
agcattattttgacaaacaatggcttgaccataactgaaggtgaaggagcgctaataaca
aaaagcagattgtttgcacaaaccatggataataaggcctttcaatataaagttacaaag
agtcctcaacatgggaaattaaaactcattaacttttcagattcaccagagagtaatgat
aacctcaccactttcagtaaccaagatataatggctgaacgccttatgtatgtccatgat
gacactgagaccatgtacgatgaatttcttgtcgtagcatccaccagagaatcaggagaa
tgggtgagctctgctgctggaacagaacctttatcagcagagataagatttaatattact
gttgagctgaagaatgatgagaaaccagtacgtgtggttgataaggtatttcatgtggtt
aagaatgggcagcgcttattgaccttggcagacctatgctaccatgatcctgattctgat
tttgatgacgggcagttgctgtacactaggcgtggcattcctaatggagacttgactcta
gtgaatgataacactcatagtctctatcaattcaaacaagaagacctggagcaaaagcga
gtcctatttacacatagaggtgcggattatgggcgctttgtgttatttataactgatggc
aaacactacacgtcttctcttctagaagtgagtgcttcagatccctatgttagactagca
aacaatacaggcttattggtccaaaaaggaaaagagagaactattacaacaactaacctt
agtgccatcacaaaccaagacattagaagggatcacgagattacttatgagttattcttg
tctccaaaacatggaagaatctttgtaaataatctagcaacagattcctttacccaactt
gacctaaaaaggggacatgtgatttataggcatgacgacagtaacaacctggttgacaca
tttaactttacagtttatgctaaggatatccaccaggatgctggaatgcatgttcgtatg
tacttggaaagccatcaacgtccaccaaagattgtacacaataacaatctcttagttgaa
gaaggaaaaccagttaaaatcagtaaggggaaattgcaggttgtacatgaaaacagttct
ccatcagagatagtgttcacattaagggctcttccagtgcatggatacattcggaagttt
gcatcagaagaaggttaccttggtgcagaacaaaagccagttttgacctttacccagcaa
gatattgatgatggcaatgttcagtatgtccagacagtttctgaccagctacaagaccat
ttttcgttggatgtgaccaatggcattcgagtggtcagtgaaatagaaatctctgtagac
atcatccctaagctgattccattagaagtgcagaactttacagtaatagaaggtggttct
aaagccctggtggaagactatctaaaaatttctaatcagcatttcactggactcagttgt
gaatttatcttagttgagccaccaaagaatgggcatgttggaaactctcgctttcctgga
gtaaagttaaccaaatttaccaaaaaacaggtagagcaagaattaatctactatattcat
gatgacagtgagggggtgagtgacaattttactgtcatagcaaataacacagaactgtgg
aaacaaagtttgccccaaactatatttgtgaccgttacgtcagtaaatgatgaaactcct
gtaataagtacaaacaaaatacttagggtttgggtgggctcagttacggaaataacagtt
gatgacctttgtgcagaagataaagactcctcagcatcagagctagtgtactctattact
ccacctagcaatggccacttggctcttaaatcttctccaaacaaaagcatccttaatttt
acccaggctcatataatggaaggacagctggtgtttgtacacaatggagcaatgtctgga
ggcttcaattttcaggttacagatggtctgaactttgcacctcgacaaatttttagtatc
acagctcgcactctagttatcagcctagaaattaaaaaaggactgagagtgtttccaggg
tctaggaaaattatttcagctcatgatctgaaagctgtaaccaacgatgcggccaacaca
ggaaacagaactatcacttttacaattgtcagagccccaaaacttggaagactgatcaga
atagacactgacaacaccacacaggatatttccacttttactcaatccatggtggatgaa
ggcttgatcatctatgagcacacacataatgaggctgtgggctggagtgcagaagattac
ttcacatttacagtctcctcccctccagcagctctggatctccaggtgtttcacgttgcc
atttcatatgaaattaacagacatgatcagagtagtcgcctgcttgcaaatacaggtgct
attgttcaggaaggaggtaaagtccttatcaacaaaacaaatttagatgcttcaaatcta
ttggttaagttaccagaggtgcaacgttctatatatgaagtccggtatcaagttatatct
ttacctcagcatggcataattgtggctggagaaagaaatattactgaagaaaaacctaac
ttctcacagtacatacttaacaaatttggaatcatttacatgcatgataactctgaatca
cttgctgatcatttcacttttgctgtttggttaaacctgaagagtaagtctgcaagaaag
cctgatactgatgttttggaagagatatttaatatcaccattgttccagtgaatgaccaa
gttccagagctgaaaactaaaggactgcgtttgaaagttctgcaaggagatacatctgtg
ctaggaccagaaaatctgaaagtcgaagacttagacaacagtccaggagagattaaatac
acagtcattagcaatcccaccaatggccatttagcaatgatgaacgatctcagtacatcc
atacaagatttcacgcaagctgatgttgatagtggcagagtttggtttgtacaagacaga
agttcatcctctggggttttttactttagtgtgactgatggcaaacatcgcccattatac
aaacttttcagccttgaagtcatactagtctctctcaccctagtcaaccttactgatgtg
gtacttccgcaggggcagacctctgtcactattactaatgtacagctatcagctacaaca
aatggaaaaagtactgacattagttatgaaataacagtgcccttcaaatgtggccattta
ctgattggaaatgagcaggttaataaatttgagcaggcagacttacactcaggaagacta
tcttattttatgacaaatctcagtgcatcccgggatatattggagtttatgttgttcacc
tcagaaagtaatcttacaggacaggtactcaatatcatagcacggcctttggtgaaagct
gcatctgacctgaaaattccaaacgagatggtttataaattaaggatcaaggacctggat
gctacagaattagctaatctgacaaatagcaatcccaaatttgaagtgacagtgccccca
gctcatggaagaattgtaagaagaaggtcaataaatgatgccacatttgtaggaattaat
ttgttcacacaaaatgacattgacagaggtgttgtgctggttgatgtacatgctaatctg
acaggtattgatatgttaaatgactcgttcacattcatactcagggctgatgatgtgcag
cctgctgtaggctattttcaatatgtcataatgccatatgatcctttatttgtgcagaga
tttacaagtcacgtgcctttcttaacccacactgacactttaaaaattcatactacttcc
aaggatgagccaccagtttcccaacaggatgagggacatacagaagcactgggaaagact
gtgcagatcaggtggcaaaaccgaaatcgctggggaaatcaaaatgaggaagattcattg
cttaatggggaaccagttgagagcagatctgcaaggaccaagactacagttaaagcaaat
gccaaaagtcccagtgtgaagccacgtgaaagcagcaaccctttgtccatcattatccca
cttgcatcagtggctcttttactcattgtcgctgttatttccgtgtgtttttttctaatg
tgtcataagacagaaaaggcaaaatctctcaacaaaaatcaaacacagtcaattcccagc
attccaggtctcagtccagaacggagcctgagcgtacccatggtcacagtgacgcctctt
ccaaaaggggctgaaaacaccacagccaccccattcgtggcagtcagatgtaaacagctt
cttcccacaccagttgcttcagctgaaaaaaattctctacaaaacaactggttaaacctt
gatcctgaaatgctccagcactgtcgaaaaacaaacccaactttgaaacgcagtcagtat
tgggtgtag
DBGET
integrated database retrieval system
