Chelonoidis abingdonii (Abingdon island giant tortoise): 116818282
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Entry
116818282 CDS
T07367
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04140
Autophagy - animal
cabi04148
Efferocytosis
cabi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116818282 (VPS18)
04148 Efferocytosis
116818282 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116818282 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116818282 (VPS18)
Membrane trafficking [BR:
cabi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116818282 (VPS18)
Hops complex
116818282 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_5
zf-RING_Vps41
zf-C3HC4_2
zf-RING_16
zf-RING_11
STX17_N
zf-RING_UBOX
zf-ANAPC11
zf-RING_2
DUF5600
zf-rbx1
KNOX2
Motif
Other DBs
NCBI-GeneID:
116818282
NCBI-ProteinID:
XP_032624953
Ensembl:
ENSCABG00000009868
UniProt:
A0A8C0GVY8
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLSRSASLQQSRANVGIPHSGYVNARLEKETPIFNKQRIDFTPPEKINSL
VVSCNQLCMSLGRDTLFRIDLGKADEPNQVELGRKDEARVYRMFLDHTGSHLVIALNTSE
CLYLNRSAQKVRTLSRWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRLVYSLEEEAGPTQVCCLEIERGLDGKCFIIATTSKRLFQFVGKVPEGTE
QQGFGFMFGMHADHLPSFREFPASFGYSEIAFYTPKLRSSPRSFAWMMGNGVLYGTLDYG
RPDSILSDERVWEYPSDVDVAANKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGSLKRMIKDPTVGQIWIHTEKVVFRYHVQRESRDVWKMYMNVNKFDLAKEYCKDRPE
CLDIVLAREAEHSFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLLKKLASL
KSSEKTQTTLLTTWLTELYLNRLGALEGDTSKRSLCDETREKFCSFLSSPRNKECLFNNR
ASIYELLASHGDTEHMVYFSVIMQDYERVVAHHCQHDDYDEALNVLTRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGTKLDARKLIPALVNYSQSGSTQQISEAIRYMEFCVCELEETE
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHVYKVM
ELYEEAVDLALQVDVDLAKSCADLPEEDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
NLLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNRHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLFQAVFPNLPAYKQAKLEDLQK
KLGATSQPSKAHHRPKDTDATSLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEERQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcctggacgagtacgaagattcgctgtcccgctcagcctctctgcagcag
agccgcgccaacgtgggcatcccgcactctgggtatgtgaatgctcggctggagaaggag
actccaatatttaacaagcaaaggattgatttcactcctccagagaaaattaacagcctt
gtggtctcctgtaaccagctctgtatgagccttggcagagacacccttttcaggattgat
cttggcaaggcagatgaacctaatcaagtagagctgggacgcaaggatgaagccagagtc
tacaggatgtttttggaccacacaggatctcaccttgtgattgcactgaacactagtgaa
tgcctgtatttgaacagaagtgctcaaaaggtgcggacactttcccgctggaaaggtcac
ttgattgaaagtgtgggctggaacaagtttctcggttcagagactaacactggtcctatc
ctggtggggacagcccagggccaaatatacgaggctgagatctctgtcagcgagggaagt
ctcttcagcactaatccggaccagtatttccgactggtctattccttagaggaggaggca
gggccgacccaagtctgctgtctggaaatagagcgagggctcgacgggaaatgttttatc
attgccactactagtaagagactcttccagtttgttggcaaagtgcctgaggggacagag
cagcagggctttggcttcatgtttggcatgcatgcagaccacttgcccagcttccgagag
ttcccagccagctttgggtacagcgaaatagcattttacacaccaaagctacgctcctcc
ccacgctcctttgcctggatgatgggaaatggtgtcttgtatggtacattggactatgga
cggcccgactctattctgagcgatgaacgggtctgggagtatccctctgatgtagacgtg
gcagctaacaagccgatctccatagtgctcacccagttccacttcctgctgctattacct
gacagagtgaaggctgtgtgcactctgaatgggcaggttgtcttccaagacttgttcttg
gagaagtttggctcgttgaagcgcatgatcaaagatcccacagttgggcagatctggatc
cacacagagaaagttgtattccgctaccacgtacaacgggagtccagagacgtgtggaag
atgtacatgaacgttaacaagtttgatctggccaaagagtactgcaaagaccgtcctgag
tgcctggatattgtgttggcaagagaggcagaacactccttccaaaacaagaggtaccta
gatagtgccaagtgctatgcactgacccagaactactttgaagagattgcccttaagttc
attgaagccaagcaggaggaggcattgatggagtttctgctcaagaaactggccagctta
aagtcctctgaaaagacccagacaactttgctgaccacctggttaacagaactctacttg
aatcggctaggtgctctggaaggggacacctcgaaaaggagtctctgtgatgagactcgg
gagaagttctgcagcttcttgagcagccctagaaacaaagagtgcctgttcaataaccga
gcatccatctatgagttgctagcaagccatggggacacggaacacatggtctatttttca
gttattatgcaggattatgagagagtggtagcccatcactgccagcatgatgactatgat
gaagccctaaatgtccttaccagacacagagatgagaaactcttttacaagttctctccc
gttctgatccagcacatccccaagaaggtggttgatgcttggatctctatgggcacgaaa
ctggatgccaggaagctcatacctgccctcgtcaactacagccaaagtgggagcacccaa
cagatcagtgaagctattcgatacatggaattctgtgtgtgtgagctggaggaaacagag
caagccattcacaactacctgttgtctctctatgctttgtgtcggccagactcgctgcta
tcatacctcgaacaagcaggaaccaaccctaacaggatccactatgacctgaagtatgcg
cttcggctgtgtgcagagcatggacaccaccgagcctgtgtccatgtttacaaagtgatg
gagttatatgaggaagcagtggatctagctctgcaggtggatgtagatctagcaaagtcc
tgtgcagacctccctgaagaggatgaggaactccggaagaagctctggttgaaaattgct
cgccacgtggtccaggaagagaaggacgtcaagaaggccatggcttgcctttctagctgc
aacctattaaagattgaagatgtcctgcccttcttccccgactttgtcaccattgaccat
ttcaaggaggctatttgcaactctctggaggactacaacagacacatcgaggagctgaag
agagagatggaggaagctacacagagtgccaagagaatccgggaggacatccaggagatg
agaaacaaatatggctctgtggagcctcaggaaaagtgtgcagcctgtgactttccactc
ctaaaccgccctttctaccttttcctttgtggccacatgttccactatgactgtctgttc
caggcagtttttccaaacctgcctgcctacaagcaagctaagctagaagaccttcagaag
aagctgggagccacaagccagccctccaaagcccatcatcgtcccaaggacacagatgcc
actagcttggggaagggacagcagagtcgggaacagatcaaggcagacatcgatgatatt
gtggcagctgaatgtgtgtactgtggggagctgatgatccggtctattgacaagcctttc
attgacccacaaaagtatgaagaggagaggcagagttggctgtag
DBGET
integrated database retrieval system
