Chelonoidis abingdonii (Abingdon island giant tortoise): 116818322
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Entry
116818322 CDS
T07367
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116818322 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116818322 (IRF1)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116818322 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
116818322
NCBI-ProteinID:
XP_032625017
Ensembl:
ENSCABG00000012044
UniProt:
A0A8C0H112
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MPVTRMRMRPWLELQINSNQIPGLVWINKDKMMFQIPWKHAAKHGWDIDKDACLFRSWAI
HTGRYKVGEKEPDPKTWKANFRCAMNSLPDIEEVKDKSINKGCSAVRVYRMLPPLTKLQK
KERKSKSSRESKNRSKRKSYEDQRMDEAVEAQNSSSLPDDHSGYTVHSYAEQEVEIENAS
ISLDLSSCDINTMTDWRSSMEIAMADSTNDLYQLQVSPLASSSEVTDDDAEEMKDQLYKL
FEQDWHATSVGGKGYLTNEPGTQNICSNFSYKEQDSEIDTTSGEIEFRFCTDLKSSLEFS
WLDTVRSTGIQAIPCSL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccggtaacaagaatgcgcatgaggccctggctggagttgcagattaattccaatcaa
ataccaggattggtgtggatcaacaaggataagatgatgttccagatcccatggaaacat
gcagctaaacatggctgggatatagataaagatgcctgtcttttccgaagctgggccatt
catactgggagatacaaggtaggcgagaaagagccggaccccaaaacttggaaggcaaat
ttccgctgtgccatgaattcactgcctgatattgaggaagtgaaggacaaaagtatcaac
aaaggctgcagcgcagtccgagtttacaggatgctaccacccttaacaaagcttcagaaa
aaagaaaggaagtcaaagtcatctagagagtcaaaaaacaggagtaagagaaagtcatat
gaagaccagaggatggatgaggcagtagaagcacagaacagcagcagtctaccagatgac
cacagtggctatacagttcacagctatgcagaacaggaagtggagattgagaacgcctcc
atcagcctagatctctcatcgtgtgatataaacacaatgacagattggagaagttcaatg
gaaatagcaatggctgacagcacaaatgacctttaccagcttcaagtgtcacctttggct
tcatcttctgaagtaacagatgatgatgcagaagaaatgaaagatcaactttacaagctg
tttgaacaagactggcatgcaaccagcgttggtgggaaaggatatctgaccaatgagccc
ggcacacaaaacatctgcagcaacttcagctacaaggagcaagattctgaaatagataca
acctcaggggaaatagagttcagattttgtactgatctgaaaagcagtctagaattttct
tggctggacacagttcgatccactggtatacaagccattccatgtagcttgtaa
DBGET
integrated database retrieval system
