Chelonoidis abingdonii (Abingdon island giant tortoise): 116818498
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Entry
116818498 CDS
T07367
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116818498 (RBBP6)
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116818498 (RBBP6)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
U-box type E3
116818498 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
116818498
NCBI-ProteinID:
XP_032625368
Ensembl:
ENSCABG00000006711
LinkDB
All DBs
Position
Unknown
AA seq
1775 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKSTSKTYVMTPKPHKILETSFRSRTEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMNDAVVIPCCGNSYCDECIRTS
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQIQPPRPTVQRNL
QPTVRPPVSRQQDPLMIPITSSPSLTSSLTPSQSSVTTTLPVNQSSATAPAADISATMSI
SLHSEKPEGPFHDADSVIPPAAIVTASEHSKTSSSLSISTVMEEKGYQVPVLRQPALQGQ
LASQGQSIPTTGQPIRTNTVRSAGNRPGWEPSSNRGRPHSERTQRTQAPTLPASTPVFVT
VPPPPLFPPPPHALPLPPGVPPPQFPPQFPPGQPPPAGYSVPPPGYPPAPANISTPWVPT
AVPTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKE
RRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYPRRGR
GKSRNYRSRSRSHGYHRSRSRSPAYRRYHSRSRSPVFRGQSPTKRTIPQGEGEREYINRY
REVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAAGAQPRPPVNRENF
SPDRFGPPGSRRENSPYARGRREDFASGQSHRSRNIGSNYPEKPSARESHNIKDPTKSKE
KEAENPSGDGKGNKHKKHRKRKKGEESEGFPNAELLEGSRKPREPGGGEEIKTDSLFMLP
SRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKVKVDKTKRKTEGTATTKKDSLVKPS
KAPQEKAEADREKSPRTEPPVKKVKEELPKTDNTKSTSSQKDEKALGTPRKGNPKVTKEH
PETRPAKDEKVKKEHPKESKPEKPSSKEEKSKKPMEKSKPTDTKPEKRKRKAEEKVEKEH
ETTSLKTSKAEVAEVKPSPKGKTEPDSEKAERSPEKDKAASLIAPAKKIKLNRETGKKIV
SGENVPPTKEPAEKPEPPSSKVKQEKVKGKMRRKVTAADGSSSTLVDYTSTSSTGGSPVR
KSEEKPDAKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQAPS
NVGKPASVVKNVSAKPTNPVKHNEKENEPLEKPQKTAKEANYESSQHEAKSSKNSVSNEK
GKTKDRDHSVSDKDTSERRKSSIQPEKGHSERGTEQGNLKNLSQSSKDSRSSDKHDTGRG
SSARDFTPNRDKKSDYESSRDHSSFKRRDEKNELTRRKDSPSRNRESASGQKSKPRDERI
ELSKKGTVESKRSSYSPQRDRRQYDHKTAYDSKRSSDEHRSLDRSSGKEREKHISETKSN
KDRDISGNKSSYKHSSPDAKNEREHATGQSDKSTIKPKPQLSHSSRLSSDLTRETDEAAF
VPDYNESDSESNVSTKDEDSIGRNTRELKEKAGDKSKETAVKATLGQPGVSRNQSQSSPS
VSRSRSQSPSESQTRSHSSSASSAESQDSKKKKKKKDKKKHKKHKKHKKHKKHTGNESEL
EKSQKHKHKKKKSKKSKDKEKEKEKDDQKVKSVAV
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcgtccattacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctccacatctccctgtgcgacctcaagcgccagatcatgggccgcgagaagctcaag
gcggccgactgcgacctgcagatcaccaacgcgcagaccaaagaagaatacacagatgat
agtgccctgattcctaagaactcatctgtaattgttagaagaatccctattggaggagtt
aaatctacaagcaaaacatatgtcatgactcctaaaccgcacaaaatcctagaaacttct
ttcagaagtcgaactgaaccagtgagtggaacttcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttacaaagactgccaatctggctgaagccaatgcttccgaa
gaagataaaataaaagctatgatgtctcagtctggccatgaatatgatccaatcaattac
atgaagaaacctttgggtccacctccaccatcctatacgtgctttcgttgtggaaaacct
ggtcattacataaagaattgtccaacaaatggggacaaaaattttgagtctgttcccagg
attaaaaagagcacaggaattcccaggagtttcatgatggaagtgaaagatcccaataca
aagggtgctatgcttacaaacacaggaaaatatgcaataccaactattgatgcagaggct
tatgctatagggaagaaggaaaagccccctttccttccagaggaaccatcctcctcctca
gaagaggacgatcctattccagacgaattgttatgtctaatctgtaaagatataatgaat
gatgcagttgtcattccctgctgtggaaacagttattgtgatgaatgtatcagaacatca
ctattggaatcagaggaacatacctgcccaacttgtcatcaaacagatgtttcccctgat
gctttaattgccaacaaattcttacgccaggctgtaaacaacttcaaaaatgaaactggc
tacacaaaaagactccgtaagcagatacaaccaccaagaccaacagttcagcggaacctg
caacccacagtaaggcctccagtttccagacaacaggatcctctaatgattccaatcact
tcttcaccttctctaacatcgtcattgactcctagtcagtcatctgtgacgactactttg
ccagtaaatcagtcttctgccaccgcacctgctgctgatatctctgcaacaatgtccata
tctcttcactctgaaaaaccagaaggaccctttcatgatgctgatagtgttatacctcct
gctgcaattgtgacagcctccgaacattctaaaacttcttcctctctatcgattagcact
gtgatggaagagaagggctaccaggttcctgtactaagacagccagcattacaaggccag
ttggcttcacaaggacagtcaatacccactactggtcagccaataagaaccaatacggtt
cgctctgcaggcaataggccaggctgggaaccaagttcaaatcgaggacgcccgcatagt
gaacgtacacaaaggactcaggccccaacattaccagcatcaacacctgtctttgtgact
gtgcctccacctcccctgtttcctccacctccccatgcacttcctcttccaccgggggta
cctccaccacagtttcctcctcagtttccacctggtcagcctccacctgctgggtacagt
gtccccccaccaggataccccccagctcctgcaaacatatcaacaccttgggtaccaaca
gcagtaccaacggctcattcaaataccatcccaacgacacaagcacctcctttatctagg
gaggaattttacagagagcagcggagacttaaagaggaagaaaagaaaaagtccaaactc
gatgagtttacaaatgattttgctaaagaactgatggaatacaagaagattcaaaaggaa
cgcagacgctcattttccaggtccaagtcaccatatagtgcttcatcttactctagaagt
tcatatacgtactccaagtcaagatcaggttcatcccgctcccgttcctactctcgatcc
tttagtcgctcacactctcgttcatactcacgatcacctccatacccaagaagaggcagg
gggaagagtcgtaactatcgttctaggtcaaggtcccatggatatcatcgttcgagatca
aggtcacctgcatatagaagataccattcacgatcaagatctccagtttttagaggccaa
tcccccactaagcggactatacctcaaggagagggagagagagaatatattaaccggtat
agagaagttccaccatatgatatgaaagcatactatggcagatctgttgattttagagat
ccatttgaaaaggaaagatacagagaatgggaaaggaactatcgagagtggtatgaaaag
ttttacaaaggctatgctgctggagctcagcctagacctccagtgaatagagagaacttt
tctccagaccgatttggtccaccaggatccaggcgagagaattccccatatgctcggggt
cgtagagaggattttgctagtggacaaagccatagaagtcgcaatataggtagcaattat
ccagaaaagccttcagcccgagaaagccacaacattaaagatcctacaaaatcaaaggaa
aaggaagctgaaaatccatcaggagatggcaaaggaaataaacataaaaagcatagaaag
agaaagaaaggggaagagagtgaaggctttcccaatgctgagttgttggaaggctcgcga
aagcccagagagcctggtggtggggaagaaattaaaactgactcactgttcatgctccca
agtagggatgatgctacacctgtcagagatgagcccatggaagcagattctattgctttt
aaaccagtatctgaaaaagagaaaaaagagaaagataaacctaaagtaaaagttgacaag
acaaaacggaaaacagaaggaactgccactaccaagaaagacagtttagtaaaaccatct
aaagcaccccaagaaaaagcagaggctgatcgtgaaaagtctcctcgaactgagcctcct
gtgaaaaaagtaaaggaggaattgccaaagacagacaatactaaatcgacttcatctcaa
aaggatgagaaggcacttggcacaccacggaaaggtaacccaaaagtgacaaaagagcat
ccagaaaccagaccagccaaggacgaaaaagtaaagaaagagcatccaaaagaatccaag
ccagaaaagccatcaagcaaggaagagaagtcaaaaaaaccaatggaaaaaagcaaacct
actgatacaaaacctgaaaaaagaaaaagaaaggcagaggaaaaggtagaaaaggaacat
gaaaccacttcattaaaaacctctaaagcagaagttgctgaagtgaaaccatcaccaaag
ggaaaaactgagcctgatagtgagaaagcagagagatctcctgaaaaggacaaagctgct
tctctgattgccccagcaaaaaagattaaactaaaccgagaaacaggcaaaaagattgta
agtggggaaaatgtacctcctacaaaagaacctgctgagaaacctgagccacccagcagc
aaagttaaacaagaaaaagtgaaaggaaaaatgagaagaaaagtaacagcagctgatgga
tcgagttcaactcttgtagattacaccagcactagctctactggaggcagccctgttaga
aagtctgaagaaaagccagatgcaaaacgaacggtcattaagaccatggaagagtataat
aatgatataacagcccctgctgaagatgtcattattatgattcaggttcctcagtcaaag
tgggataaagatgactttgagtctgaagaggaagatgttaaatctacgcaagcaccttca
aatgtaggaaaacctgctagtgttgtaaaaaatgtcagtgctaagcccacaaaccctgtg
aaacacaatgaaaaagaaaatgagcctttggaaaaaccacagaaaactgcaaaagaagca
aattatgaaagctcccagcatgaagcaaaaagttcaaaaaattctgtctcaaatgaaaaa
gggaaaaccaaagaccgggatcattctgtgtcagacaaggacacttctgagagaaggaag
agcagtattcaaccagaaaaaggccattcagaacgtgggactgaacagggaaacctaaaa
aacctttctcaatcttccaaagacagcagatcttcagataaacatgatactgggcgtgga
tcttctgctagagattttactcctaacagggataaaaaatctgactatgagagcagcaga
gatcattctagtttcaagcgtagagatgaaaagaatgagttaacaaggagaaaagactct
ccttctcgaaatagagagtctgcatcaggccagaagagtaaaccaagagatgaacgtata
gaattgtccaaaaagggaactgtagaatccaaaaggagcagttacagccctcagagggac
cgaagacagtatgatcacaaaacagcatatgattccaaacgttcatctgatgaacacaga
tctctagatagaagttcaggtaaagaaagagagaaacacatatcagaaacaaagagcaat
aaagaccgagacataagtggcaataaatcatcttacaaacacagctcacccgatgcaaaa
aatgagagagaacatgctactgggcagagtgacaagagcaccatcaaacctaagcctcag
ttaagccactcctctcgactctcttctgacttaactagagaaactgatgaggctgcattt
gtaccagactacaatgaaagtgacagcgagagtaatgtgtcaacaaaagatgaggactct
ataggaagaaatactagagaactgaaagaaaaggcaggggataaatctaaagagactgca
gttaaagcaacgcttggccaacctggcgtaagtagaaatcagagtcaaagtagtcccagt
gttagccgcagccgtagtcaaagcccttctgaaagtcagactcgaagccacagcagcagt
gcaagctcagcagagagtcaggacagcaagaaaaagaaaaagaaaaaagacaaaaagaaa
cacaagaagcataaaaaacacaagaaacataagaaacacactggaaatgaatctgaattg
gagaaaagccaaaaacacaaacacaagaagaaaaaatccaagaagagcaaagataaagaa
aaggagaaagagaaggatgaccaaaaagtgaaatctgtcgctgtataa
DBGET
integrated database retrieval system
