Chelonoidis abingdonii (Abingdon island giant tortoise): 116818740
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Entry
116818740 CDS
T07367
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116818740 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116818740 (RNF43)
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116818740 (RNF43)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116818740 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
DUF5305
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
116818740
NCBI-ProteinID:
XP_032625831
Ensembl:
ENSCABG00000007495
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MSAGPQLQLAVLWPWLLIATLQVGLGHTGLALAVESERSAAQKAIIRVIPLKVEPITLEG
VFANVAEVTPAEGKLLQFHPLSLCNTSEDEHTGSGFVTIVKLERPDRDLHPCLSLANKAK
LAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIWGHDAELLMGVVNKNREAHVKIE
VKEQPAWPDYDVWILLTVLSTVIVIVLIFVARTKCHWNRTQDSLQQQTMQAISRLAIRKY
QARCRQAALRDSASSCSSAPICAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHTCP
LCMFNIIEGAAFVQPAHLRQNSQDLEPGQRLHLFRQHPGYALYHLPEAHPQRRLRNFASQ
LPHGNPFFHSPELSQLDFSTMHYLPYRPVGSMATCSHQPSLAQGLGNEQHQKSPACGQMP
SSHRTCPLQHQAHCLGFRTAAVPRQHHAAPLHRGTSHGRQHISSGSGESYLTEHSGYLAD
GPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYEPWVYGSSTDNGQEQ
LQPPGEPRPRSLDLKETGSTALANSQILSHVHYHHHRHHHYRNDLECPSGRSGQEPSQRR
PQFAGAVPSARTQKRTEKTHHCKQPLESSPGSQDASLSGQPFCVHQGPDLSKHLSSSADR
SDFSRVASRQAGAADPLPFPLSQKHGLQSRHHRRKRKCRPEPILAHLSEDSDVHKDCNVH
VHYGHSPGYCCSPEVQSLLPTARMPYCSGSQVVWKCRVPPSNLESQQQDKDLSEREGKPM
YPGDFSGTGTAEDNTSLYLPFQTLQHNQGSKEEIQDVYEHSV
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccagctgcagctggctgtcctctggccttggctgctaatagctaca
ctgcaggttggacttggccatactgggctggcactggcagtggagtcagagaggtcagca
gcacagaaggctattattagggtgatccccttaaaggtggagccaatcacattggaagga
gtgtttgctaatgttgctgaggttactccagcagaaggaaaattgctgcagttccacccg
ctgtctctgtgtaacaccagtgaggacgagcacaccggctctggctttgtcacgattgtc
aaactcgagcggcccgatcgagatctgcatccctgcctgtcgttggccaacaaggcgaag
ctagcaggggagcggggggctcgtgccatcctcttcgacatcacagatgatgaaagcgcc
gctgaccagctgaggaaacccaggggcctgagtcagcctgtggttctgatctggggccat
gatgctgagcttctgatgggtgtcgtgaacaagaatcgagaagcacatgtgaagattgag
gttaaagagcagccagcgtggcccgactatgatgtgtggattcttctcacagtgctgagc
actgtcatcgtgattgttctgatttttgttgctcgcaccaagtgtcactggaacaggact
caggactccttgcagcagcagaccatgcaggcgatcagccggctggccatccggaagtac
caggcccggtgccgacaggccgccctaagggattcggcgagcagctgcagctcagccccc
atctgcgctatctgtctggaggagttcagtgagggccaggagctgcggattatttcctgt
tcccatgagttccacagagagtgtgtcgacccctggctgcagcagcaccacacctgcccg
ctctgcatgttcaatatcatcgagggggctgcctttgtccagcctgcacatttgaggcag
aattcccaggatctggaacctgggcagcggcttcacctcttccggcaacacccaggatac
gccctgtatcacctcccagaggcccacccccagcggcggctcaggaactttgcttcgcag
ctcccccatggcaaccccttcttccattccccagagctctcccagttggatttcagcacc
atgcactatttgccatacaggccagtgggctccatggcaacatgcagccatcaaccctct
ctagcccaaggcctagggaatgagcagcaccaaaaatctccagcatgtgggcagatgcca
tcttctcacaggacctgcccacttcagcaccaggcccattgcctgggattcaggactgca
gcagtaccaagacagcaccatgctgcccctcttcatcggggaaccagtcatgggaggcag
cacatcagcagtggctcaggggagagctatctcacagagcacagtgggtacctggctgac
ggtccaggcagtgactccagctccggaccctgtcatggctcctccagtgattctatgttg
aattgcacagatgtcagcctccagggcatccatggcagctgctccaccttccgcagctcc
ctgagcagtgactacgaaccctgggtgtacggtagctccactgacaatggccaggagcag
ctgcagcctcccggggagccaagaccgaggtctttggatttgaaggagactggcagcact
gcattagccaatagtcagatactgagtcatgtccattatcaccaccacaggcatcatcat
tacaggaacgacctagagtgtccatctgggagatcaggccaggaacccagccagcgtagg
ccccagtttgctggggctgtgcctagtgcccggacacaaaagaggactgagaaaactcat
cactgcaaacagcctctcgaaagcagcccagggtcccaggatgcatctctgtcaggacag
cccttctgtgtgcatcagggacctgacctctcaaagcacctctcctcttctgcagacagg
tctgacttcagcagggtggccagtaggcaagctggagcagctgatcccttgcctttcccg
ctatcacagaaacatggcttacaaagccgtcaccacagaaggaaacggaagtgccgcccg
gagcctatcctggctcacctttcagaggactcagatgtgcacaaagactgcaatgttcac
gttcactatggccactcccctggctactgctgctccccagaagttcagtcactgttgcca
acggcccgtatgccctattgctcaggctctcaggtggtttggaagtgccgagtcccgccc
tccaatttggagtcccagcagcaggacaaggacctatcagaacgggaggggaaacccatg
tatccaggtgatttctcagggacaggcaccgcagaagacaacacaagtctttacctcccc
ttccaaactctgcaacacaaccagggatccaaggaggagatccaagatgtgtacgaacat
tctgtttaa
DBGET
integrated database retrieval system
