Chelonoidis abingdonii (Abingdon island giant tortoise): 116818874
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Entry
116818874 CDS
T07367
Symbol
APEX2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116818874 (APEX2)
Enzymes [BR:
cabi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
116818874 (APEX2)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
116818874 (APEX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
116818874
NCBI-ProteinID:
XP_032626023
Ensembl:
ENSCABG00000014713
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MRLLSWNVAGLRAGPGLAGLGALDGDVICLQETRVTRDLLTEPLAMVDGYNSYFSFCRTR
SGYSGVATFCKDSATPLAAEEGLSGLLARRAGEGGAVGCYGDLGAFTPQELKALDGEGRA
VITHHGIRTSAQQETTLTVINVYCPRADPQRPEHVAYQVSFYRLLQGRAEALLRDGGHVV
ILGDINTSHRPIDHCEPGDLEAFQEHPGRRWLDGFLWVPDGQGLFVDTFRLLHPSQPYAF
TCWRIDTGARLTNHGTRLDYVLADRALALAELRDARILPEVPGSDHCPVLAELAATFVPA
PCCPSLCTRHMPEFAGTQQKLSRFLVRVERGAGAVGGHGMCRGAGVGPRCSARRGRRLPR
GQGDLLRYFRAAQGQLGTGMGQNGQESGQNASGHGTREPAQDAPGQRGQEAAHNAPGQSR
QLEPMLGQAAGTQLSSMAHWRMVLRGPTLPPCCPAHREPCALRTVRKPGPNHGRRFYVCA
RPPGRSSDPRACCNFFRWAGKGHS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgctgagctggaacgtggccgggctgcgggccgggccgggcctcgcggggctc
ggggcgctggacggggacgtgatctgcctgcaggagacccgcgtcacacgggacctgctg
acggagccactggccatggtggacggctacaactcctacttcagcttctgccgcacccgg
agcggctactcaggtgtggcgaccttctgtaaggacagtgccaccccgctggcggcggag
gaggggctgtccgggctcctggcccggcgagccggggagggcggtgccgtgggatgttat
ggagacctcggggccttcacaccccaggagctgaaggcgctggacggtgaggggcgcgcg
gtgatcacccaccacggcatacggacatcggcacagcaggagaccaccctgacggtgatc
aatgtgtactgcccacgggccgacccccagcgccccgagcacgttgcctaccaggtatcc
ttctaccggctgctgcagggccgggccgaggcgctgctgagagacgggggccacgttgtg
atcttgggggacatcaacacgtcgcatcggcccatcgaccactgcgagccgggggacctg
gaggcgttccaggagcacccaggccggcgctggctggacgggttcctgtgggtgccagat
gggcaggggctcttcgtcgacaccttccgcctcctgcaccccagccagccctacgccttc
acctgctggcgcatcgacaccggtgcccgtctcaccaaccacggcacgcggctagactat
gtcctggccgaccgggccctggcgctggccgagctgcgggatgcccgcatcctgcccgag
gtgcccggctctgaccactgccctgtcctggctgagctggcagccacctttgtgccagcg
ccctgctgcccctccctctgcacccgccacatgcccgaattcgcaggcacccagcagaag
ctcagccgcttcctggtcagggtggagcggggagcgggggctgtgggaggccacgggatg
tgtcggggggcaggggtgggaccgaggtgctctgcacggagggggagacgcctgcccagg
ggacaaggggaccttctgaggtatttcagagctgcacagggccagctggggacaggcatg
ggccagaatggacaagagtcgggccagaatgcctcagggcatgggacacgggaaccggcc
caggatgcgccggggcagagaggacaagaggcagcccacaatgcaccagggcagagcaga
caattggagccgatgctggggcaggcagcaggcacccagctgagcagcatggcccactgg
cgcatggttctgcgtggcccgactctcccgccctgttgcccagcccacagggagccctgc
gccctgcgaactgtccgcaaacccggccccaaccatgggcggcgtttctatgtctgtgcc
cggcccccagggcgctccagtgacccccgtgcctgctgcaatttcttccgctgggctggc
aaggggcactcgtga
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