Chelonoidis abingdonii (Abingdon island giant tortoise): 116818906
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Entry
116818906 CDS
T07367
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04110
Cell cycle
cabi04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116818906 (SMC1A)
04114 Oocyte meiosis
116818906 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabi03036
]
116818906 (SMC1A)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116818906 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
116818906 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
116818906
NCBI-ProteinID:
XP_032626078
Ensembl:
ENSCABG00000014810
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFRRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEDGAEDRTFARVIVGGSSEYKINNKVVQLSEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEAEIEKLNK
ELGSKNKEIDKDKKRMDKVEDELKDKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKQYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYIATSKQSLEEQKKLEGELTEEVELAKRRIDEINKELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQEKVHIWEQ
TVKKDEAEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEVGDGQG
LAMMLGAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKP
APFFVLDEIDAALDNTNIGKVANYIKEQSACNFQAIVISLKEEFYTKAESLIGVYPEQGD
CVISKVLTFDLTKYPDANPNPNEQ
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctgaagctgatcgagatcgagaacttcaagtcttacaaggggcggcaaatc
atcgggcccttccggaggttcacggccatcatcgggcccaacggctccggcaagtcgaac
ctcatggacgccatcagcttcgtactgggcgagaagacgagcaacctgcgggtgaagacg
ctgcgggacctgatccacggggcgcccgtgggcaagccggccgccaaccgggccttcgtc
agcatggtgtactccgaggacggggccgaggaccgcaccttcgctcgcgtcattgtgggg
ggctcgtcggaatacaagatcaataacaaagtggtgcagctcagcgaatacagcgaggag
ctggagaagctggggatcctcatcaaagccaggaatttcctcgtcttccagggggcggtg
gagtcgatcgccatgaagaatccaaaggagcgcacagcgctgttcgaggagatcagccgc
tcgggggagctggcccaggagtacgacaagcgcaagaaggagatggtgaaggctgaggag
gacacgcagttcaactaccaccgcaagaagaacatcgcggctgagcgcaaggaggccaag
caggagaaggaggaggcggaccggtaccagcgcctgaaggacgaggtggtgcgggcccag
gtccagctgcaactcttcaagctgtaccacaacgaggccgagatcgagaagctcaataag
gagctgggctccaagaacaaggagatcgacaaggacaagaagcgcatggacaaggtggag
gatgagctcaaggacaagaagaaggaactgggcaagatgatgagggaacagcagcagatt
gagaaggagatcaaggagaaggactccgagttgaaccagaagcggccacagtacatcaag
gccaaggagaacacctctcacaagatcaagaagttggaggcggccaagaagtcactgcag
aacgcccagaagcagtacaagaagcgcaaaggcgacatggatgagctggagaaggagatg
ctgtcggtggagaaggctcgacaggagtttgaggagcgcatggaggaggagagccagagc
caggggcgagacctcaccctggaagagaaccaggtgaagaaatatcaccggctgaaggaa
gaggccagtaaaagagctgccacgctagcccaggagctggagaaatttaaccgggaccag
aaagcagatcaggaccggctggacctggaggagaggaagaaagtggagaccgaggccaag
atcaagcagaagctgcgggagattgaggagaaccagaagcggattgagaagctggaggaa
tacatcgctaccagcaagcagtcgctggaggagcagaagaagctggagggggagctgacg
gaggaggtggagctggccaagcggcgcatcgacgaaattaacaaggagctgaaccaggtg
atggagcagctgggggacgcccgcattgaccggcaggagaacagccgccagcagcgcaag
gccgagatcatggagagcatcaagcgcctctaccccggttccgtgtacgggcgacttatc
gacctctgccagcccacgcagaagaaataccagatcgcagtcaccaaggtgctgggcaag
aacatggacgccatcatcgtggactcggagaagacgggccgcgactgcatccagtacatc
aaggagcagcggggcgagccggagaccttcctccccctggactacctggaggtgaagccc
acggacgagaagctgcgagagctgaagggggccaagctggtgatcgacgtgatccgctac
gagccgccccacatcaagaaggccctgcagtacgcctgcgggaacgccctggtgtgtgac
aacgtggaggacgcccggcgtatcgccttcgggggccatcagaggcacaagacagtcgcc
ctggacggcaccctgttccagaagtcaggggtgatctccggaggcgccagcgacctgaag
gccaaggcccgccgttgggacgagaaggccgtggataagctgaaggagaagaaggagagg
ctgacagaggaattaaaggagcaaatgaaggccaagcgcaaagaggccgagttgcggcag
gtacaatcccaagcccacgggctgcagatgcggctgaaatactcccagagcgacttggaa
cagaccaagacgcgtcacctcgccctgaacctccaggagaagtcgaagctggagagcgaa
ctggctaactttgggcctcgcatcaacgacatcaagcgaatcatccagagccgggagcgg
gagatgaaggacctcaaggagaagatgaaccaggtggaggacgaggtgttcgaggagttc
tgccgggagatcggggtgaggaacatccgggagttcgaggaggagaaagtgaagcggcag
aacgagattgccaagaaaaggctggagtttgaaaaccagaagacgcggctggggatccag
ctggatttcgagaagaaccaactgaaggaggaccaggagaaggtgcacatctgggagcag
accgtcaagaaagacgaggccgagatcgagaagctcaagaaggaggagcagcgtcacatg
aagatcatcgacgagaccatggcccagctgcaggacctgaagaaccagcacctggccaag
aaatctgaagtcaacgacaagaaccacgagatggaggaaatccgcaagaaactgggcggg
gccaacaaggaaatgacccacctgcagaaggaggtgacggccatcgagacgaagctagag
cagaagcgcagcgaccgccacaacctgctgcaggcctgcaagatgcaggacatcaaactg
cccctctccaagggcaccatggacgacatcagccaggaggaggtgggggacgggcagggg
ctggccatgatgctgggtgcgttcctgggcccggagaatcccgaagagccgtacctggat
ggaattaattacaactgcgtggcccctggcaagcggttccggcccatggacaacctgtct
ggaggggagaaaaccgtagcagccttggcccttctgtttgctatccacagctacaaacct
gcccccttttttgtgctggacgaaattgacgctgcgctggacaacaccaatattgggaag
gtggccaactacatcaaagagcagtcggcctgcaacttccaggccattgtcatctcgctg
aaagaagaattctacaccaaggccgagagcctgattggggtctaccccgagcaaggggac
tgcgtgatcagcaaagtactgacctttgacctcaccaagtaccccgacgccaacccgaac
cccaacgagcagtga
DBGET
integrated database retrieval system
