Chelonoidis abingdonii (Abingdon island giant tortoise): 116819130
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Entry
116819130 CDS
T07367
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cabi04040
]
116819130 (PKD1L2)
04091 Lectins [BR:
cabi04091
]
116819130 (PKD1L2)
Ion channels [BR:
cabi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116819130 (PKD1L2)
Lectins [BR:
cabi04091
]
C-Type lectins
Others
116819130 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
Ion_trans
SUEL_Lectin
Lectin_C
GPS
PKD
Abhydrolase_9_N
PKD_4
Motif
Other DBs
NCBI-GeneID:
116819130
NCBI-ProteinID:
XP_032626502
Ensembl:
ENSCABG00000021574
LinkDB
All DBs
Position
Unknown
AA seq
2481 aa
AA seq
DB search
MWLLITVLSSLVLRSAVEEIALEEGIPCSKYQVAFNLSCYEFVRLPRTFTSAQSWCERGG
GHLVFIENEETQQFLQNHISEDREWWIGLTSSSLLNETAEGSLIWLDTSNISYSNWHEDQ
PSLLANCGYILKNSGYKWGMTENCSQEFDFICEFESGQSIACDNFNATMQCGSGEVIQIG
DSFYGRKTPHYCVLETPLQLDMEEDCSWTSVKDEVAGQCHGLQACQVASDGTFFGDPCPT
LGSYLSVQYHCMEGLQLAVTETCFSFENITVSLKWLLSPYSGNLSCIISTGDGHTIDPYY
PQTLSSNVTHQYTSPGEFTVFVECTTSEWHVTAQKLVTVQDKMDQLSITGCYSKYESGNS
SHCRTLYGEMLWIQAELNGGTGVTYTVTADNTTLIESSAKEGIVPHNLTLDGTSQQLIGP
GVHQLEILATSNTTTSEISESIAVHLVEPISGLQAALASHTLEMGKDLKINVSVAHGVPD
KLKFEVVGSNETYSHQKDSPKGKSRIYSIPVHTEGTFVVKVLAMNAFSNMSLEIGSITVL
ANNSLEEDSSQNRGKSKANIRKTNDDKRKNKIYIKPSRHVDPFTTVTLDWPDDNDNSTFT
WACGACWPGWQECVQHQVIPTDQSMAQIPPACLPPPNSAVTLQVIVRSPGKEEKQDEQCL
YVTARQELRPEIRCETNCKLVNVTAEVVLRATMQEDSQTVQYNWYLDNTFQSKPPSLPSV
CSLKGFQQSSLTLLQSNRSTLVLNSSFLQAHGEAFRIKVTAMTQHEYGDETYIVSMVPSP
VVPVCAVSPKEGSVLTSFTISCSTACSEDSCPPAHSSLFTYCFYLKSGSLLNCGPHPELL
SVYLPLGEEENNFVLHVTITVSNNFGDTVQTDAIVKVRREDMNPGNQTLQATLAEKANAI
LKEGYNSMSLFQLYKSMSSVLNQESQGKTFNASLQTDTRRELRELMLTTLSAVNVTSIQT
ALKMSEVLKETTYRSEELSSSAQVEASNSLKDVSEFLLTVSTEDSEDYQKRKDAAGYLFN
AVSNVLTASIQNGTEDASSSEVGQSLVSHQLLDTVENLQSTLLIGKLPDDEPVVLVAPSV
AMYINRLQTDSMDGTSINISDSSSASFILPSASSLSVSGDSDETVDIRMVSFAVNPFSLS
DTSFEISGTVGGLSLTSVDGLVIPVNELTENIEIMLPRFSAPQENRSLLNLGNFSALQVN
VTSENTSLVIHLETEQDIPLILYLGYGCHPNETNYDMKSHLPLKKNTGDKSNTWVLSPEE
LIFGEGTYYLTMEQDMEMDSTANSNLTIAVSSFVSQCVFWDELRGNWNSYGCHVGPKTTP
SSTQCLCNHLTFFGSTFFVTPNTIDVSKTAELFGTFVDNPVVVTTVGCIFLVYVLVAIWA
RRKDIQDDAKVKITVLKDNDPFAQYRYLVTVFTGHRRGAATTSKVTLTLYGLEGESEPHH
LTDPDTPVFERGGVDIFLLCTLFPLGELQRIRLWHDNSGDSPSWYVNRVLVHDLAQDQKW
YFLCNSWLAIDVGECVLDKVFPVATEQDMKQFSNLFFMKTSKGFQDGHIWYSIFNRSPRS
TFTRAQRVSCCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGFESSLLMF
PINLLIVQIFRNIRPKVTKEQEKKLGKSGRVSPNLPPPPQAIQSITLTPEAVIKDIRRIA
NSLFKTLKTPLPSSETDLGKSTDINTLLALVEDIICQQNRAGQEFYDESKKKDDPIIITL
GSVDIQEKTRSPTPEKGMGERLKHNDYNRYLYMQLQHVEMELELLGPHKFQKAQSYIQAV
RQVQHMKGLLERHLCSSGSISERCSPTPSFSGDGKKGSSFKGLPWWFVFIGWFLIAATSG
VSGFFTMLYGLHYGKDNSIKWLISMAISFFESLFITQPLKVLGFAAFFALVLKKVEHEDE
ENTDVDESLSAPGNSNPLFGARRDSRSNIYQPPPATDIQRMKNNHIKEQKAFALIREILA
YLGFLWMLLLVAYGQRDPNSYYLNKHIESSFTDGFRDIYSYQDFFTWAKTTLVNKLYGSY
QGFITDGNSKLVGSARIRQVRVKGNTCPIAPKLQGSVQECHASYSPQAEDTSDYGEHWNI
SAFDNSSELSSAWQYQSQSKLRGHPVWGKLAIYRGGGYVVHLGTDPKNATRILQYLFNNI
WLDTFTRAVFVEFTVYNANVNLFCIVSLMFETNALGAFFTHAELQSIRLYPYTDGLHIFV
VAAEVIYFLFIIYYMIAQAKLMRALKWRYFHSKWNLLELAIILISWSTLSVFVKRTILGA
RDISYYQHHKDECVSFNETATADAALGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLRR
AWGDISGFITVILIMFLAYSIATNLIFGWKLHSYKTLFDSAETMVSLQLGIFNYEEVLDY
NPILGSFLIGSCIIFMTFVVLNLFISVILVAFSEEQKHYQASEEEEIVDLMLMKIFSFLG
IKCKKEEKLTNVDQLKEAAST
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttctaatcactgttctctcctctctcgttctccgttcggctgtggaggaaatt
gctcttgaggaggggataccttgttcaaagtaccaggtggctttcaacctttcatgctac
gagtttgtgagactcccacgcactttcacgagtgcccagagctggtgtgagagaggaggg
gggcacctcgtttttattgaaaatgaggaaactcaacagttcttgcagaaccatatctcc
gaggacagggagtggtggataggactgacctcaagttcccttctgaatgaaactgcagaa
ggatcattgatttggctggacacttcaaatataagctacagcaactggcatgaggatcag
ccatctctcttagccaattgtggatacatcctgaagaactctggctataaatggggcatg
acagaaaactgcagtcaggagtttgacttcatttgtgaatttgaatctggccagagcatt
gcttgtgataacttcaatgccaccatgcaatgtggatcaggagaagtcattcagattggt
gacagtttctatgggcggaagacccctcactactgtgtattggagactcccctccagctt
gatatggaagaggattgtagctggaccagtgtcaaggatgaagtagcagggcagtgtcac
ggactccaggcatgccaggtggcatcagatgggacattctttggagatccttgtcctaca
ttggggagctacttgtctgttcaatatcactgcatggaaggtttgcaactggccgtgact
gagacgtgctttagctttgaaaatattacagtttctctgaaatggctactctctccctat
tctggcaacctttcctgtatcattagcactggagatggacacactattgatccctattac
cctcaaaccttgtccagcaatgtgacacaccagtatacctctcctggagagtttactgtc
tttgtggaatgcacaaccagtgagtggcacgttacagcacaaaaactggtgacggttcag
gataagatggatcagctcagcattactgggtgctacagcaagtatgaatcaggaaacagt
tctcactgcaggaccctgtatggggagatgttatggatccaagctgaactcaatggaggt
actggagtgacctacactgtaacagctgacaatacaactctgattgaatccagcgcaaag
gaaggaattgtccctcacaatctgacgcttgatggtacctctcagcagctgattggccca
ggggtgcatcaactggaaattctggcgaccagcaacacaacaacatccgagatttctgaa
agcattgctgttcatttagttgaacctatatctggtcttcaggctgcattagcctcccac
acactggaaatgggaaaagacctgaagataaatgtctctgtggctcatggtgtaccagat
aagctgaagtttgaggtggtcgggtctaatgaaacttactctcatcagaaagacagccct
aaaggaaaatctagaatatatagtattcctgttcatactgaaggtacatttgtggtcaag
gtgctggctatgaatgccttctcgaacatgagtctggagattgggagcatcaccgtattg
gccaacaattctcttgaagaagattcgtctcagaacagaggcaaatccaaagcaaacatc
cgaaagacaaatgatgacaaaaggaaaaataaaatatacattaaacctagtcgccatgtg
gatccgttcacaaccgttacccttgactggccagatgacaatgataattctaccttcacc
tgggcatgtggggcttgctggcctgggtggcaggaatgtgtacagcatcaagtaattccc
actgaccagagcatggcacagatcccacctgcctgcctgcccccgccaaactcagcggtg
accctgcaggtgatagtcagaagccctggaaaagaagagaagcaggatgagcaatgtctg
tatgtgactgccagacaagaactgcgcccagaaatcaggtgtgagacaaactgcaagcta
gtgaatgtcactgcagaagttgttttgagagccaccatgcaggaagactcccagactgta
cagtataattggtatttagataacacattccagtcaaagcctccctccctcccttcagtc
tgtagtctgaagggtttccaacagagctccttgactttgcttcagagcaacagatctaca
ttggtattgaacagctcctttctgcaggcacacggagaagcatttcggattaaagtaaca
gcaatgactcagcatgaatatggcgatgaaacctacattgtcagcatggtgccctcacca
gtggtcccagtctgtgctgtatctcccaaggagggatcggtgctcaccagcttcacaatc
tcctgcagtactgcctgctcggaggactcctgcccccctgcacacagcagtctgttcacg
tactgcttctacctgaaatcaggctccctcctgaactgtggcccacatcctgaactcctg
tcggtttatcttccccttggagaagaggaaaataactttgttttacatgttacaattact
gtcagcaataactttggtgacacagttcagactgatgctattgtcaaggttcgacgtgaa
gatatgaaccctgggaaccagaccctgcaggccactctagctgagaaagcaaatgccatc
ttaaaagaaggatacaacagcatgtccctgttccagctgtataagtcaatgtcttcagtc
cttaatcaggagagccagggaaagacctttaatgcatctctgcagaccgacacccgaagg
gagctgagagagctgatgctgacaactctgtctgctgttaatgtaacatcaatacagact
gctcttaagatgtcagaggtactgaaagaaaccacttacaggagtgaagagctctcttcc
tcagcacaggtggaagccagtaactctctcaaagatgtcagtgagttcttactcactgta
agcacagaggacagtgaggattatcagaagcgaaaggacgcagccggctacctgttcaac
gcagtgagcaatgtgctcacagcttccatacaaaatgggacagaggatgcttcatcatca
gaggttggacagagtttggtctcacaccagctgttggacacagttgaaaacctgcaaagc
acactcctgattgggaaactgccagatgatgaaccagtggtattggtcgctccctctgtc
gcaatgtacataaacaggttacaaacagacagcatggatggcacatccattaacatctct
gattccagctcagccagctttattctcccctctgcctcctctctcagtgtctcaggagac
agtgatgagactgtggatataaggatggtgagttttgcagtgaatcccttttccttaagt
gacaccagttttgagatcagtggaaccgtgggaggcctaagtcttaccagtgttgatgga
ttggtcataccagttaatgaactcactgaaaacattgagataatgctgccaagattttca
gcacctcaggaaaacaggagcctgttgaatctgggcaattttagtgctctccaagtcaat
gtcacctcagaaaatacatctctagtgatccacctggaaactgaacaggatattccacta
atactgtacttgggatatggctgccacccaaatgagactaactatgatatgaaatctcat
ctgccccttaagaaaaacactggagataagtcaaacacatgggttcttagcccagaagaa
ctcatttttggagaagggacttactatctcacgatggaacaagacatggaaatggattct
acagccaacagtaatctaaccatagctgtctcttcctttgtatcccagtgtgtgttctgg
gatgagcttcggggcaactggaatagctatgggtgccatgtaggtccaaaaacaaccccc
agcagcacccagtgtctctgcaaccacctgaccttctttgggagcaccttctttgtcacg
cccaacaccattgatgtcagcaaaacagcggagctttttggcacatttgtggacaacccc
gtggtagtgacaactgtgggctgtatctttcttgtgtatgtgctggtggctatttgggct
agaaggaaagacattcaggatgatgccaaagtgaagatcacagtgttgaaggataatgac
ccctttgctcagtatcgttatcttgtgacagtttttacagggcaccgtcgaggggcagcc
acaacctccaaggtgactctcaccctttacggcctcgaaggagagagtgaaccgcaccac
ctgactgaccctgacacaccagtctttgagcgtggaggagtggatattttcttgctctgt
accctgtttcctcttggggaactgcagcgtatccgactgtggcatgataattcaggagac
agcccatcctggtatgtgaatcgtgtgctggtccatgacctggctcaggatcaaaaatgg
tatttcctctgtaactcttggctggccattgatgttggagagtgtgttctagacaaagtg
ttcccagttgctactgagcaggacatgaagcagttcagtaacctgtttttcatgaagact
tccaagggtttccaggatgggcacatctggtattcaattttcaaccgctccccacgaagc
accttcacacgagcccagagagtatcatgctgcttctccctgctgctctgcaccatgctg
accagcatcatgttctggggggtgccgaaggacccagctgagcagaaaatggacttaggt
aagatcgagttcacatggcaggaggtgatgatcggctttgagagctccctcctcatgttc
cccatcaacctgctcatcgtgcagatcttcaggaacatccgacccaaggtgaccaaggag
caggagaagaaactagggaagagtggccgagtgtctccaaacctgccccctccccctcag
gcaatccagagcatcacactcacccctgaggctgtgataaaggatattaggagaattgcc
aattcactgtttaagaccctgaagactccgctaccatcctcagaaacagaccttggaaaa
tctactgacatcaacacactgttggctttggttgaggacatcatctgccagcagaacaga
gctgggcaagagttttatgatgagagtaaaaagaaggatgatcctattatcatcacacta
gggtctgtagatatacaagaaaaaacaagaagcccaactccagagaaaggaatgggtgaa
aggctgaaacacaatgactacaaccgctacttgtacatgcaactccagcacgtagagatg
gagttggaattactgggacctcacaaattccagaaggctcagagttacatccaagctgtt
aggcaggtccagcacatgaaaggcctcctggaaagacacctctgctcttcaggatctatc
agtgagaggtgctcccctactccaagtttctctggggatggcaagaaaggttcctctttc
aaaggcttgccctggtggtttgttttcattggctggttcctcatagctgccaccagtggt
gtgtccggattcttcaccatgctttacgggctacattatggcaaagataactccatcaag
tggctgatttccatggccatctccttctttgaaagtctcttcatcacacagcccttaaaa
gtgttgggatttgctgctttctttgctttggttctgaagaaagtggagcatgaagatgag
gaaaacactgatgttgatgagtctctgtctgcaccaggcaactcaaaccctttatttgga
gctcgaagggatagcagaagcaacatctatcagccaccccctgccacagacattcagaga
atgaagaacaatcatatcaaggagcagaaagcctttgccttaatcagagaaatcctggcc
tacttgggatttttatggatgttactgttggttgcctatggacaaagagatcccaattcc
tactacctgaacaagcacattgaaagcagctttacggatgggtttcgggatatctactct
tatcaggacttcttcacatgggcaaaaactaccttagtcaacaagttatatggctcatat
caaggcttcattacagatggcaactccaagttggtaggcagtgcccgaattcgtcaagtg
agagtgaaggggaacacctgcccgatagctcccaaattgcaaggctcggtccaagaatgc
catgcttcgtattctccccaagcagaagacacgtcagactatggggaacactggaatatc
tcagccttcgataactcctctgagttgagttctgcatggcaatatcagagccagtccaaa
cttagagggcatccagtgtggggcaaacttgccatctataggggaggaggatatgtggtt
cacttaggaactgatccaaaaaatgcaaccagaattctccaatatctcttcaacaacatc
tggctggacaccttcacaagagcagtgtttgttgaatttacagtctacaatgccaacgtg
aacctgttctgtattgtaagcctgatgtttgaaacaaatgcattaggggccttcttcacg
catgcagaactgcagagcatccggctctacccctacacagatggtctgcacatctttgtt
gttgcagcagaagtgatttatttcctatttatcatctactatatgatagcacaggcaaag
ctcatgagggctctgaaatggaggtatttccacagcaagtggaacttgctagagctggct
attatactgattagctggagcaccctatcagtatttgtgaagaggacaatcctgggggca
cgtgatatcagctactaccagcatcacaaggatgagtgtgtaagtttcaatgaaacagca
acagctgatgcagctcttggctacttaattgctttcctggtgcttctctctactgtgaaa
ttgtggcatctcctgaggctcaaccctaaactaaacatgatcacctccaccttgaggagg
gcttggggtgacatctctggatttatcactgttattttaatcatgttcctggcctattcc
attgctacaaatttgatatttggctggaagctgcactcctacaaaaccctctttgattca
gcagagacaatggtcagccttcagctgggaatcttcaactatgaggaggtcttggactat
aatccaattttgggctccttcttaattggatcctgtatcattttcatgacatttgtggtg
ctcaatctgttcatttcagtgattctggttgcttttagtgaggaacagaaacattatcag
gcttcagaagaagaagagattgttgatctaatgctgatgaaaattttcagtttccttggg
attaaatgcaaaaaggaagagaagctgaccaatgttgaccaactgaaagaagctgctagc
acttga
DBGET
integrated database retrieval system
