Chelonoidis abingdonii (Abingdon island giant tortoise): 116819130
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Entry
116819130 CDS
T07367
Name
(RefSeq) polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cabi04040
]
116819130
04091 Lectins [BR:
cabi04091
]
116819130
Ion channels [BR:
cabi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116819130
Lectins [BR:
cabi04091
]
C-Type lectins
Others
116819130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
SUEL_Lectin
Ion_trans
Lectin_C
GPS
PKD
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
116819130
NCBI-ProteinID:
XP_032626502
LinkDB
All DBs
Position
19:complement(32447620..32512547)
Genome browser
AA seq
2510 aa
AA seq
DB search
MTAQERGTKSMVIWCITPVPWRAPTAKLKMWLLITVLSSLVLRSAVEEIALEEGIPCSKY
QVAFNLSCYEFVRLPRTFTSAQSWCERGGGHLVFIENEETQQFLQNHISEDREWWIGLTS
SSLLNETAEGSLIWLDTSNISYSNWHEDQPSLLANCGYILKNSGYKWGMTENCSQEFDFI
CEFESGQSIACDNFNATMQCGSGEVIQIGDSFYGRKTPHYCVLETPLQLDMEEDCSWTSV
KDEVAGQCHGLQACQVASDGTFFGDPCPTLGSYLSVQYHCMEGLQLAVTETCFSFENITV
SLKWLLSPYSGNLSCIISTGDGHTIDPYYPQTLSSNVTHQYTSPGEFTVFVECTTSEWHV
TAQKLVTVQDKMDQLSITGCYSKYESGNSSHCRTLYGEMLWIQAELNGGTGVTYTVTADN
TTLIESSAKEGIVPHNLTLDGTSQQLIGPGVHQLEILATSNTTTSEISESIAVHLVEPIS
GLQAALASHTLEMGKDLKINVSVAHGVPDKLKFEVVGSNETYSHQKDSPKGKSRIYSIPV
HTEGTFVVKVLAMNAFSNMSLEIGSITVLANNSLEEDSSQNRGKSKANIRKTNDDKRKNK
IYIKPSRHVDPFTTVTLDWPDDNDNSTFTWACGACWPGWQECVQHQVIPTDQSMAQIPPA
CLPPPNSAVTLQVIVRSPGKEEKQDEQCLYVTARQELRPEIRCETNCKLVNVTAEVVLRA
TMQEDSQTVQYNWYLDNTFQSKPPSLPSVCSLKGFQQSSLTLLQSNRSTLVLNSSFLQAH
GEAFRIKVTAMTQHEYGDETYIVSMVPSPVVPVCAVSPKEGSVLTSFTISCSTACSEDSC
PPAHSSLFTYCFYLKSGSLLNCGPHPELLSVYLPLGEEENNFVLHVTITVSNNFGDTVQT
DAIVKVRREDMNPGNQTLQATLAEKANAILKEGYNSMSLFQLYKSMSSVLNQESQGKTFN
ASLQTDTRRELRELMLTTLSAVNVTSIQTALKMSEVLKETTYRSEELSSSAQVEASNSLK
DVSEFLLTVSTEDSEDYQKRKDAAGYLFNAVSNVLTASIQNGTEDASSSEVGQSLVSHQL
LDTVENLQSTLLIGKLPDDEPVVLVAPSVAMYINRLQTDSMDGTSINISDSSSASFILPS
ASSLSVSGDSDETVDIRMVSFAVNPFSLSDTSFEISGTVGGLSLTSVDGLVIPVNELTEN
IEIMLPRFSAPQENRSLLNLGNFSALQVNVTSENTSLVIHLETEQDIPLILYLGYGCHPN
ETNYDMKSHLPLKKNTGDKSNTWVLSPEELIFGEGTYYLTMEQDMEMDSTANSNLTIAVS
SFVSQCVFWDELRGNWNSYGCHVGPKTTPSSTQCLCNHLTFFGSTFFVTPNTIDVSKTAE
LFGTFVDNPVVVTTVGCIFLVYVLVAIWARRKDIQDDAKVKITVLKDNDPFAQYRYLVTV
FTGHRRGAATTSKVTLTLYGLEGESEPHHLTDPDTPVFERGGVDIFLLCTLFPLGELQRI
RLWHDNSGDSPSWYVNRVLVHDLAQDQKWYFLCNSWLAIDVGECVLDKVFPVATEQDMKQ
FSNLFFMKTSKGFQDGHIWYSIFNRSPRSTFTRAQRVSCCFSLLLCTMLTSIMFWGVPKD
PAEQKMDLGKIEFTWQEVMIGFESSLLMFPINLLIVQIFRNIRPKVTKEQEKKLGKSGRV
SPNLPPPPQAIQSITLTPEAVIKDIRRIANSLFKTLKTPLPSSETDLGKSTDINTLLALV
EDIICQQNRAGQEFYDESKKKDDPIIITLGSVDIQEKTRSPTPEKGMGERLKHNDYNRYL
YMQLQHVEMELELLGPHKFQKAQSYIQAVRQVQHMKGLLERHLCSSGSISERCSPTPSFS
GDGKKGSSFKGLPWWFVFIGWFLIAATSGVSGFFTMLYGLHYGKDNSIKWLISMAISFFE
SLFITQPLKVLGFAAFFALVLKKVEHEDEENTDVDESLSAPGNSNPLFGARRDSRSNIYQ
PPPATDIQRMKNNHIKEQKAFALIREILAYLGFLWMLLLVAYGQRDPNSYYLNKHIESSF
TDGFRDIYSYQDFFTWAKTTLVNKLYGSYQGFITDGNSKLVGSARIRQVRVKGNTCPIAP
KLQGSVQECHASYSPQAEDTSDYGEHWNISAFDNSSELSSAWQYQSQSKLRGHPVWGKLA
IYRGGGYVVHLGTDPKNATRILQYLFNNIWLDTFTRAVFVEFTVYNANVNLFCIVSLMFE
TNALGAFFTHAELQSIRLYPYTDGLHIFVVAAEVIYFLFIIYYMIAQAKLMRALKWRYFH
SKWNLLELAIILISWSTLSVFVKRTILGARDISYYQHHKDECVSFNETATADAALGYLIA
FLVLLSTVKLWHLLRLNPKLNMITSTLRRAWGDISGFITVILIMFLAYSIATNLIFGWKL
HSYKTLFDSAETMVSLQLGIFNYEEVLDYNPILGSFLIGSCIIFMTFVVLNLFISVILVA
FSEEQKHYQASEEEEIVDLMLMKIFSFLGIKCKKEEKLTNVDQLKEAAST
NT seq
7533 nt
NT seq
+upstream
nt +downstream
nt
atgacagcccaagagagagggacaaaaagcatggtgatatggtgcataacaccagtgcca
tggagggctccaaccgctaagctaaaaatgtggcttctaatcactgttctctcctctctc
gttctccgttcggctgtggaggaaattgctcttgaggaggggataccttgttcaaagtac
caggtggctttcaacctttcatgctacgagtttgtgagactcccacgcactttcacgagt
gcccagagctggtgtgagagaggaggggggcacctcgtttttattgaaaatgaggaaact
caacagttcttgcagaaccatatctccgaggacagggagtggtggataggactgacctca
agttcccttctgaatgaaactgcagaaggatcattgatttggctggacacttcaaatata
agctacagcaactggcatgaggatcagccatctctcttagccaattgtggatacatcctg
aagaactctggctataaatggggcatgacagaaaactgcagtcaggagtttgacttcatt
tgtgaatttgaatctggccagagcattgcttgtgataacttcaatgccaccatgcaatgt
ggatcaggagaagtcattcagattggtgacagtttctatgggcggaagacccctcactac
tgtgtattggagactcccctccagcttgatatggaagaggattgtagctggaccagtgtc
aaggatgaagtagcagggcagtgtcacggactccaggcatgccaggtggcatcagatggg
acattctttggagatccttgtcctacattggggagctacttgtctgttcaatatcactgc
atggaaggtttgcaactggccgtgactgagacgtgctttagctttgaaaatattacagtt
tctctgaaatggctactctctccctattctggcaacctttcctgtatcattagcactgga
gatggacacactattgatccctattaccctcaaaccttgtccagcaatgtgacacaccag
tatacctctcctggagagtttactgtctttgtggaatgcacaaccagtgagtggcacgtt
acagcacaaaaactggtgacggttcaggataagatggatcagctcagcattactgggtgc
tacagcaagtatgaatcaggaaacagttctcactgcaggaccctgtatggggagatgtta
tggatccaagctgaactcaatggaggtactggagtgacctacactgtaacagctgacaat
acaactctgattgaatccagcgcaaaggaaggaattgtccctcacaatctgacgcttgat
ggtacctctcagcagctgattggcccaggggtgcatcaactggaaattctggcgaccagc
aacacaacaacatccgagatttctgaaagcattgctgttcatttagttgaacctatatct
ggtcttcaggctgcattagcctcccacacactggaaatgggaaaagacctgaagataaat
gtctctgtggctcatggtgtaccagataagctgaagtttgaggtggtcgggtctaatgaa
acttactctcatcagaaagacagccctaaaggaaaatctagaatatatagtattcctgtt
catactgaaggtacatttgtggtcaaggtgctggctatgaatgccttctcgaacatgagt
ctggagattgggagcatcaccgtattggccaacaattctcttgaagaagattcgtctcag
aacagaggcaaatccaaagcaaacatccgaaagacaaatgatgacaaaaggaaaaataaa
atatacattaaacctagtcgccatgtggatccgttcacaaccgttacccttgactggcca
gatgacaatgataattctaccttcacctgggcatgtggggcttgctggcctgggtggcag
gaatgtgtacagcatcaagtaattcccactgaccagagcatggcacagatcccacctgcc
tgcctgcccccgccaaactcagcggtgaccctgcaggtgatagtcagaagccctggaaaa
gaagagaagcaggatgagcaatgtctgtatgtgactgccagacaagaactgcgcccagaa
atcaggtgtgagacaaactgcaagctagtgaatgtcactgcagaagttgttttgagagcc
accatgcaggaagactcccagactgtacagtataattggtatttagataacacattccag
tcaaagcctccctccctcccttcagtctgtagtctgaagggtttccaacagagctccttg
actttgcttcagagcaacagatctacattggtattgaacagctcctttctgcaggcacac
ggagaagcatttcggattaaagtaacagcaatgactcagcatgaatatggcgatgaaacc
tacattgtcagcatggtgccctcaccagtggtcccagtctgtgctgtatctcccaaggag
ggatcggtgctcaccagcttcacaatctcctgcagtactgcctgctcggaggactcctgc
ccccctgcacacagcagtctgttcacgtactgcttctacctgaaatcaggctccctcctg
aactgtggcccacatcctgaactcctgtcggtttatcttccccttggagaagaggaaaat
aactttgttttacatgttacaattactgtcagcaataactttggtgacacagttcagact
gatgctattgtcaaggttcgacgtgaagatatgaaccctgggaaccagaccctgcaggcc
actctagctgagaaagcaaatgccatcttaaaagaaggatacaacagcatgtccctgttc
cagctgtataagtcaatgtcttcagtccttaatcaggagagccagggaaagacctttaat
gcatctctgcagaccgacacccgaagggagctgagagagctgatgctgacaactctgtct
gctgttaatgtaacatcaatacagactgctcttaagatgtcagaggtactgaaagaaacc
acttacaggagtgaagagctctcttcctcagcacaggtggaagccagtaactctctcaaa
gatgtcagtgagttcttactcactgtaagcacagaggacagtgaggattatcagaagcga
aaggacgcagccggctacctgttcaacgcagtgagcaatgtgctcacagcttccatacaa
aatgggacagaggatgcttcatcatcagaggttggacagagtttggtctcacaccagctg
ttggacacagttgaaaacctgcaaagcacactcctgattgggaaactgccagatgatgaa
ccagtggtattggtcgctccctctgtcgcaatgtacataaacaggttacaaacagacagc
atggatggcacatccattaacatctctgattccagctcagccagctttattctcccctct
gcctcctctctcagtgtctcaggagacagtgatgagactgtggatataaggatggtgagt
tttgcagtgaatcccttttccttaagtgacaccagttttgagatcagtggaaccgtggga
ggcctaagtcttaccagtgttgatggattggtcataccagttaatgaactcactgaaaac
attgagataatgctgccaagattttcagcacctcaggaaaacaggagcctgttgaatctg
ggcaattttagtgctctccaagtcaatgtcacctcagaaaatacatctctagtgatccac
ctggaaactgaacaggatattccactaatactgtacttgggatatggctgccacccaaat
gagactaactatgatatgaaatctcatctgccccttaagaaaaacactggagataagtca
aacacatgggttcttagcccagaagaactcatttttggagaagggacttactatctcacg
atggaacaagacatggaaatggattctacagccaacagtaatctaaccatagctgtctct
tcctttgtatcccagtgtgtgttctgggatgagcttcggggcaactggaatagctatggg
tgccatgtaggtccaaaaacaacccccagcagcacccagtgtctctgcaaccacctgacc
ttctttgggagcaccttctttgtcacgcccaacaccattgatgtcagcaaaacagcggag
ctttttggcacatttgtggacaaccccgtggtagtgacaactgtgggctgtatctttctt
gtgtatgtgctggtggctatttgggctagaaggaaagacattcaggatgatgccaaagtg
aagatcacagtgttgaaggataatgacccctttgctcagtatcgttatcttgtgacagtt
tttacagggcaccgtcgaggggcagccacaacctccaaggtgactctcaccctttacggc
ctcgaaggagagagtgaaccgcaccacctgactgaccctgacacaccagtctttgagcgt
ggaggagtggatattttcttgctctgtaccctgtttcctcttggggaactgcagcgtatc
cgactgtggcatgataattcaggagacagcccatcctggtatgtgaatcgtgtgctggtc
catgacctggctcaggatcaaaaatggtatttcctctgtaactcttggctggccattgat
gttggagagtgtgttctagacaaagtgttcccagttgctactgagcaggacatgaagcag
ttcagtaacctgtttttcatgaagacttccaagggtttccaggatgggcacatctggtat
tcaattttcaaccgctccccacgaagcaccttcacacgagcccagagagtatcatgctgc
ttctccctgctgctctgcaccatgctgaccagcatcatgttctggggggtgccgaaggac
ccagctgagcagaaaatggacttaggtaagatcgagttcacatggcaggaggtgatgatc
ggctttgagagctccctcctcatgttccccatcaacctgctcatcgtgcagatcttcagg
aacatccgacccaaggtgaccaaggagcaggagaagaaactagggaagagtggccgagtg
tctccaaacctgccccctccccctcaggcaatccagagcatcacactcacccctgaggct
gtgataaaggatattaggagaattgccaattcactgtttaagaccctgaagactccgcta
ccatcctcagaaacagaccttggaaaatctactgacatcaacacactgttggctttggtt
gaggacatcatctgccagcagaacagagctgggcaagagttttatgatgagagtaaaaag
aaggatgatcctattatcatcacactagggtctgtagatatacaagaaaaaacaagaagc
ccaactccagagaaaggaatgggtgaaaggctgaaacacaatgactacaaccgctacttg
tacatgcaactccagcacgtagagatggagttggaattactgggacctcacaaattccag
aaggctcagagttacatccaagctgttaggcaggtccagcacatgaaaggcctcctggaa
agacacctctgctcttcaggatctatcagtgagaggtgctcccctactccaagtttctct
ggggatggcaagaaaggttcctctttcaaaggcttgccctggtggtttgttttcattggc
tggttcctcatagctgccaccagtggtgtgtccggattcttcaccatgctttacgggcta
cattatggcaaagataactccatcaagtggctgatttccatggccatctccttctttgaa
agtctcttcatcacacagcccttaaaagtgttgggatttgctgctttctttgctttggtt
ctgaagaaagtggagcatgaagatgaggaaaacactgatgttgatgagtctctgtctgca
ccaggcaactcaaaccctttatttggagctcgaagggatagcagaagcaacatctatcag
ccaccccctgccacagacattcagagaatgaagaacaatcatatcaaggagcagaaagcc
tttgccttaatcagagaaatcctggcctacttgggatttttatggatgttactgttggtt
gcctatggacaaagagatcccaattcctactacctgaacaagcacattgaaagcagcttt
acggatgggtttcgggatatctactcttatcaggacttcttcacatgggcaaaaactacc
ttagtcaacaagttatatggctcatatcaaggcttcattacagatggcaactccaagttg
gtaggcagtgcccgaattcgtcaagtgagagtgaaggggaacacctgcccgatagctccc
aaattgcaaggctcggtccaagaatgccatgcttcgtattctccccaagcagaagacacg
tcagactatggggaacactggaatatctcagccttcgataactcctctgagttgagttct
gcatggcaatatcagagccagtccaaacttagagggcatccagtgtggggcaaacttgcc
atctataggggaggaggatatgtggttcacttaggaactgatccaaaaaatgcaaccaga
attctccaatatctcttcaacaacatctggctggacaccttcacaagagcagtgtttgtt
gaatttacagtctacaatgccaacgtgaacctgttctgtattgtaagcctgatgtttgaa
acaaatgcattaggggccttcttcacgcatgcagaactgcagagcatccggctctacccc
tacacagatggtctgcacatctttgttgttgcagcagaagtgatttatttcctatttatc
atctactatatgatagcacaggcaaagctcatgagggctctgaaatggaggtatttccac
agcaagtggaacttgctagagctggctattatactgattagctggagcaccctatcagta
tttgtgaagaggacaatcctgggggcacgtgatatcagctactaccagcatcacaaggat
gagtgtgtaagtttcaatgaaacagcaacagctgatgcagctcttggctacttaattgct
ttcctggtgcttctctctactgtgaaattgtggcatctcctgaggctcaaccctaaacta
aacatgatcacctccaccttgaggagggcttggggtgacatctctggatttatcactgtt
attttaatcatgttcctggcctattccattgctacaaatttgatatttggctggaagctg
cactcctacaaaaccctctttgattcagcagagacaatggtcagccttcagctgggaatc
ttcaactatgaggaggtcttggactataatccaattttgggctccttcttaattggatcc
tgtatcattttcatgacatttgtggtgctcaatctgttcatttcagtgattctggttgct
tttagtgaggaacagaaacattatcaggcttcagaagaagaagagattgttgatctaatg
ctgatgaaaattttcagtttccttgggattaaatgcaaaaaggaagagaagctgaccaat
gttgaccaactgaaagaagctgctagcacttga
DBGET
integrated database retrieval system
