Chelonoidis abingdonii (Abingdon island giant tortoise): 116819636
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Entry
116819636 CDS
T07367
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116819636 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116819636 (POLR1A)
Enzymes [BR:
cabi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116819636 (POLR1A)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116819636 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
Motif
Other DBs
NCBI-GeneID:
116819636
NCBI-ProteinID:
XP_032627441
Ensembl:
ENSCABG00000016161
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MGPPREVPWRRLAGISFGMYTAEEIRKLSVKAITNPRYLDNVGNPAVNGLYDLCLGPPDA
KEVCTTCMQDFNNCPGHLGHIDLPLTVYNPLFFDKLYLLIRGSCLNCHLLTCTRAVVHLL
LSQLKVLEKGLLHAVCDLEAILNRFLDENPDASGLDIEEELNRHVNEILQNNQLGDQCSH
VKNVCECRSKLIAQFWKLHMTSKRCPNCKSRRSLVRKEHNSKLTVTYPTVVQQKSGKEAI
LEEPAIIDETQLGKRGYLTPITAKDHIVALWKNEGFFLNHLFSGLEVGENSGFSPDVFFL
DLLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVQLIRKLLAFMAQEQSQPIKLVENE
IQKVTDEPLESLDRSVLAMISGQSTADKLYNIWIRLQSHVNIVFDSDMDKLMTEKYPGVR
QILEKKEGLFRKHMMGKRVDYAARSVICPDMYIATNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPNVHPGASMVVNEDGSRTVLSATSQTQREAIAKQLLTPSTGAPKPGMKIVC
RHLKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYVLACTDEQYLVPKDGKPLAGLIQDHMISGASMTIRGCFFTREQYMELIYR
GLTDKKGRVKILPPAIMKPQRLWTGKQIVSTLLINVIPENQIPLNLSGKAKIGGKAWVKG
PQNRIPGSNLDSMCESQVIIRDGELLCGVLDKAHYGSSAYGLVHCCHEVYGGETSGKVLT
CLARLFTAYLQLYRGFTMGVEDILVKPQADHRRHRIIEVSSHCGTRAVRAAFNLLETASC
EEIQGKWQDAHLHKDQRDFNMVDLKFKEEVNTYSNEVNKACMPLGLHRSFPENNLQLMVQ
SGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPRSGGFVTGRFLTGI
KPAEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLSVRDSDGSVVQFLY
GEDGLDIPRTQFLQPKQFPFIAENYEVIQKSKHIDEVLSKMDPQQANQHFRAIKKWQAKH
QVSLPREGAFLMYSQKKMARVREQTLGGEIINGRDPATLQLLKMWYELDEKSRRKYLKRT
SKCPDPSLAVWRPDVYFASVSEAFESEVENYISEWNAQNNSNYVKSELSCDRLSNLLHLK
WQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANI
KTPMMSVPVLSTKKAHKKVKRLKKQFTRVCLAEVLQKVEVEESLCIEGKLSKHRLYQIKF
YFLPYEYYREEKCLKPRDILYFMETRFFKILLETIKRKSAKLASFNVVNTRKATRRDLDG
SGGESQENQAQDDHEADEEEAGRLVDGEADEGDADATDTKRREKQEEEVDYESEEENSEE
NGDENAEEEEGMLHDDKRAEDAEEGVQNENNGQTKKEKGLKLEHSTQLRVSAVMSSHSSI
VNYTYDTENELWCEVSLKLPLMKAYFDLSSILTSLMQNTIVHETKGITQCFLNESTNKKG
EKEFVLNTEGINLPELFRYADFLDLSRLYSNDIHAMAKTYGIEAALRVIEKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGVYKPLNRFGMQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVRGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggggcctcccagagaggtgccgtggcggcggctggccggtatttccttcgggatgtac
acagccgaggagatcaggaaactaagtgtaaaagccataaccaaccctcgttacctagat
aacgtgggcaacccagcagtaaatggactgtatgatttgtgtttgggaccacctgatgcc
aaagaagtgtgtactacttgtatgcaagacttcaacaactgcccaggacacctaggccac
atagatctgccactgactgtttacaatcctctattttttgataaattataccttctgatc
cgaggttcatgtttaaactgtcacttgctgacctgtactcgagctgtggttcacctattg
cttagccagctgaaggtcttggagaaggggttgcttcatgcagtctgtgatcttgaggcc
atcctgaataggtttttggatgaaaacccagatgcatctggtttggacattgaagaggag
ttaaatcgtcatgtgaatgaaatactacaaaataatcaactaggagatcagtgctcacat
gtaaaaaatgtgtgtgagtgtaggagtaaactgattgcacagttttggaaactgcatatg
acttcaaaaagatgcccaaactgcaaatctagaagatctctggtaaggaaagagcacaat
agcaagttgacagtaacctatcccactgtggtacagcagaagtctggcaaagaggccatc
ttggaggaaccagcaattatcgatgagactcagttggggaaaagagggtacttgacaccc
atcactgccaaagatcacattgtggctctgtggaagaatgaaggtttctttctaaatcac
ctcttctctggtctggaggttggtgagaattcaggattcagccctgatgtgttctttcta
gatctccttgtggttccaccttcaaggtatcgtcctgtgaatcgtctcggagaccagatg
tttacaaatggtcaaactgtgaacttgcaggctgtcatgaaagatgtccaattaataagg
aagcttctggctttcatggctcaagaacaaagtcaaccaataaagcttgtagagaatgaa
atccagaaggtgacagatgagccgttggaatcactggaccgttcagtcctggctatgatc
tcaggacagagcactgcagataaactgtacaacatttggattcgtcttcagagccatgtc
aatattgtgttcgacagtgacatggacaaactaatgacagaaaaataccctggtgtccgt
cagatactggagaagaaggaaggactgttccgtaagcacatgatgggaaaacgcgtggat
tacgctgctcggtcagtcatttgtcctgacatgtacattgctaccaatgagattggtatt
cctatggtatttgctaccaaattgacttaccctcagccagtaactccgtggaatgtcaaa
gaactgaggcaggctgtcataaatggtccaaatgttcaccctggtgcctccatggtcgtt
aatgaagacgggtcacgtacggtgttgagtgcaaccagccagacccagagggaagccata
gctaagcagctcctcactccttccactggagccccaaaaccaggaatgaaaattgtatgt
cgccatcttaaaaatggagatgtcctcttactgaaccgtcagcccacccttcacagacca
tccatccaagcccaccgggccagaattctgccaggagaaaaggtgctgaggcttcactat
gccaactgcaaagcctacaatgctgattttgatggtgatgaaatgaacgctcattttcct
cagagcgagctgggccgggcagaagcctacgtgttagcctgcactgatgaacaatatctc
gttcctaaggatggcaaaccactggcaggtttaatccaggatcatatgatctctggtgcc
agcatgacgatccggggctgctttttcacaagagaacagtacatggagctgatatataga
ggactgacagacaaaaagggaagagtgaaaatccttccacctgccattatgaaaccacag
cggttatggacaggaaaacagattgtatctacgttgctaataaatgtaatccctgaaaat
caaatcccactgaatttgtctgggaaagctaagattggtggaaaagcctgggtaaaaggg
ccccaaaacagaattcctggatctaaccttgattcaatgtgtgaatcccaggttatcatt
agagatggggagttactttgcggagtcttggacaaagctcactatggcagctctgcttat
ggcctagtccactgttgccatgaagtctatggtggggaaaccagtggcaaggtgcttaca
tgtctagctcgtctctttactgcctatttgcagctgtacaggggatttacaatgggagtt
gaagatattttggtcaaaccccaagcagaccacagaagacaccgaatcattgaagtgtcc
tcccattgtggtaccagggctgttagagctgcatttaacttgctagaaactgcatcatgt
gaagagatccaagggaaatggcaggatgcccatctccacaaagaccagagagattttaat
atggttgatctgaaattcaaggaggaagtaaacacttacagcaatgaggttaacaaggca
tgcatgccccttggtctccacaggagcttcccagagaacaacttgcagttaatggtgcag
tcaggagccaaagggtccactgtaaatacaatgcagatttcgtgcttgctgggtcagatt
gagttggaaggtcgaaggcctcctctgatggcatctggtaaatcattgccttgtttccag
ccttacgatttttcccctagatcagggggatttgtgactggcagatttctcacaggcatc
aaacctgctgaattcttctttcactgcatggctggcagggaaggtctggtggatacagct
gtcaaaaccagccgatctggataccttcaaaggtgtatcataaagcacttggaagggctg
gtagttcagtatgacctgagtgtgagggacagcgatggcagtgtggtgcagttcctttat
ggtgaagacgggttagatatccccaggacccagttcctgcaacccaagcagtttcctttc
attgcagagaactatgaggtgatacagaagtctaaacacattgatgaagttttatccaag
atggatcctcaacaagcaaatcaacacttcagggctatcaaaaagtggcaagccaagcat
caagtttctttgccaagggaaggagcttttctgatgtattctcagaaaaaaatggcaaga
gtgagggaacagaccctaggtggggagatcataaatggcagagacccagcaaccctacag
ttactgaagatgtggtatgaactggacgagaagagccggagaaaatatctaaagaggaca
tctaagtgtcctgaccccagcctggctgtctggcgtccagatgtttattttgcatctgtt
tcagaagcctttgaaagtgaagtagagaattacatcagtgaatggaatgctcagaacaac
agcaactatgtaaaatcagagctttcttgtgatagattaagcaacttgttgcatttgaag
tggcaaaggtctctgtgtgacccaggagaggctgtgggtctccttgctgctcaaagcatt
ggagagccttccacgcagatgactctgaacacctttcattttgctggcagaggtgaaatg
aacgtcacattgggtattccaaggttgcgggagatcctgatggtagctagtgctaacatt
aaaactccaatgatgagcgttcctgtgcttagtaccaagaaagctcacaagaaggtgaaa
aggcttaagaaacagtttacaagagtgtgcttagccgaggtcttgcaaaaagttgaagtt
gaggagtctctgtgcatagaagggaaactaagcaaacaccggctctaccaaatcaaattt
tatttcctgccatacgaatattatcgggaggagaagtgtctgaagccgagggacatctta
tacttcatggaaacacgattctttaaaatcttgttggaaacaattaaaaggaagagtgca
aagctggcatctttcaatgtggtcaatactcgtaaggcaactcggagggatctagatggc
agtggtggagaatctcaggaaaaccaggcacaggatgatcatgaagctgatgaagaggaa
gcagggaggctcgttgatggtgaagctgatgaaggagatgctgatgctaccgatacaaaa
cgaagagagaagcaggaagaagaggttgattatgagagcgaggaagagaacagtgaggaa
aatggcgacgaaaatgcagaagaggaagaaggcatgctgcatgacgataaacgggctgag
gatgctgaagaaggggttcagaatgaaaataatggtcaaactaaaaaagaaaaaggactc
aaactagagcattcaacacagctaagagttagtgctgtgatgagcagtcattcgtctata
gtcaactacacatatgatacagaaaatgagctctggtgtgaggtttcactgaagcttcct
ctgatgaaggcatactttgacctctcctccatcctaacatccctcatgcagaacacaatt
gtccatgagacaaaggggatcacgcagtgcttcttaaatgagagcaccaataagaaagga
gagaaagaatttgttttaaacactgagggaataaaccttccagagctattcagatacgct
gattttttagacctaagccgactttattccaatgacattcatgcaatggctaagacctat
ggaattgaggctgccctgagggtgattgaaaaggaaattaaagatgtatttgctgtgtat
ggtattgtggtagatcctcggcacctttctctcgtggcagattacatgtgttttgaaggt
gtttacaaaccactgaatcgttttggaatgcagtccaactcctcccctctgcaacagatg
acgtttgaaaccagctacaaatttttgaaggaagcaacaatgatgggtgcccatgatgag
ctgagatctccttctgcatgcctggtggtaggaaaagttgtcagaggagggactggtttg
tttgacctcaagcaaccccttacatag
DBGET
integrated database retrieval system
