Chelonoidis abingdonii (Abingdon island giant tortoise): 116819706
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Entry
116819706 CDS
T07367
Symbol
GRIA1
Name
(RefSeq) glutamate receptor 1 isoform X1
KO
K05197
glutamate receptor 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04080
Neuroactive ligand-receptor interaction
cabi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116819706 (GRIA1)
04082 Neuroactive ligand signaling
116819706 (GRIA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cabi04040
]
116819706 (GRIA1)
Ion channels [BR:
cabi04040
]
Ligand-gated channels
Glutamate (ionotropic)
116819706 (GRIA1)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF659
DUF7006
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
116819706
NCBI-ProteinID:
XP_032627555
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All DBs
Position
7:106540507..106710422
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AA seq
902 aa
AA seq
DB search
MQHIFAFFCTSFLGTVLGANFPNNIQIGGLFPNQQSQEHAAFRFALSQLTEPPKLLPQID
IVNISDSFEMTYTFCSQFSKGVYAIFGFYDRKTVNMLTSFCGALHVCFITPSFPVDTSNQ
FVLQLRPELQDALINIIEYYSWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTT
TEEGYRMLFQELEKKKERLVVVDCETERLNAILGKIIKLEKNGIGYHYILANLGFMDIDL
LKFKESGANVTGFQLVNYTDTVPARIMQQWKNSDAREHPRVDWKKPKYTSALTYDGVRVM
AEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGR
RTNYTLHVIEVKHDGIRKIGYWNEDDKFLPTATDSQGDNESVTLQNRTYIVTTILEDPYV
MLKKNANQFEGNERYEGYCVELAAEIAKHVGYQYRLEIVSDGKYGARDPDNKAWNGMVGE
LVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHTEEFEEGRDQPSSDQTNEFGIFNSLWFSLGAFMQ
QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIA
YGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLES
TMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKW
WYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSETKRMK
GFCLIPQQSINEAIRTATLPRPATAGGSGENGRVVSHDFPKSMQAIPCMSHSTGMSLGAT
GL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacatttttgccttcttctgcaccagtttcctagggacggtgttaggggccaat
ttccccaacaatatccagatagggggattatttcctaatcagcagtcccaggaacatgca
gcttttaggtttgcattgtctcagctcacagaaccccctaaactgcttcctcaaattgac
attgtgaatattagcgacagctttgaaatgacatacaccttctgctcgcagttctccaag
ggcgtctacgccatctttgggttttacgacaggaagacggtcaacatgctcacatccttc
tgtggggcgctccacgtctgcttcataacgcctagcttccccgtcgacacctccaaccag
ttcgtcctccagctgcgtccagagcttcaggatgccctcatcaacatcatcgagtactac
agttggcagaagtttgtgtacatttacgatgctgaccggggcttgtcagtcctacagaaa
gtgctggacacagctgccgagaagaactggcaggtgacagctgtcaacatcctgacaaca
acagaagagggctacaggatgcttttccaggagctggagaagaaaaaggaacggctggta
gtggtggactgcgagacagagcggctgaacgccatcctgggcaagatcatcaagcttgaa
aaaaatgggattggataccactacattctagcaaatttgggattcatggacattgacctg
ttaaaattcaaggagagtggagcaaatgtgactggcttccagctggtgaattacacagac
accgtaccagcaaggatcatgcaacagtggaaaaacagtgatgccagagaacatcctcga
gttgactggaagaagccaaagtacacatctgctcttacttacgatggagttcgggtgatg
gcggaggctttccagagcctgcggaggcagcggattgacatctcccgtcgtgggaatgct
ggagactgccttgcaaatccagctgttccttggggccaaggaattgacattcagagagct
ctgcagcaggtgcgctttgaaggattaaccggaaatgttcagtttaacgagaaaggacgt
cggaccaactacaccctccatgtgatcgaagtgaaacacgatgggatcaggaagattggt
tattggaacgaagatgataagtttcttcccacagccacagattcccaaggtgacaatgaa
tccgtgactctacagaatcgaacttacatagttacaactattctagaagatccatacgtg
atgctcaagaagaatgccaaccagtttgaaggcaatgagaggtatgaaggctactgcgtg
gagcttgctgctgagatcgctaagcatgttggctaccaatataggctggagatagtgagc
gatgggaagtatggagcccgggaccctgacaataaagcatggaatggcatggtgggagag
ctggtttatggaagagctgatgtggctgttgcaccattaaccatcactctcgtccgagaa
gaagtcatagacttttccaagccgtttatgagcctgggcatatccatcatgataaaaaaa
cctcaaaaatccaagccaggcgtcttttcctttctggatcccttggcttatgagatttgg
atgtgcattgtttttgcctacattggagtaagcgttgtcctcttcctggtcagccgcttc
agcccttatgaatggcataccgaggagtttgaggaagggcgtgaccagccgtccagtgac
cagactaatgaatttgggatatttaacagtctttggttctccctgggagcctttatgcag
caaggatgcgatatttcaccaagatctctctctggccgcatagttggtggtgtctggtgg
tttttcaccttgatcatcatctcttcctacacggctaacctggctgccttcctgacagtg
gaacggatggtgtcccccatagagagtgcagaagacttagccaagcagacagagattgcc
tacgggaccctggaagctgggtcaactaaagaattttttaggcgatctaaaatcgccgtg
tttgagaagatgtggacgtacatgaaatcagcggaaccctccgtttttgtgaggaccaca
gaagaggggatgatccgggtgaggaagtcgaaagggaaatacgcctacctcctggagtcc
accatgaatgagtatatagagcagcgcaagccatgtgacaccatgaaggtgggaggtaac
ttggattccaaaggctatggcattgcaacaccgaaggggtctgcactgagaggtcccgta
aacctagcggttttgaaactcagtgagcaaggcgtcttagacaagctgaaaagcaaatgg
tggtacgataaaggggaatgtggaagcaaggactccggaagtaaggacaagacaagcgct
ctgagtctcagcaatgtggccggggttttctatatcctgatcggagggctcggactagcc
atgctggttgccttaatcgagttttgttacaagtccagaagtgaaacaaagcggatgaag
ggtttttgtttgatcccacagcaatcaatcaatgaagccataaggacagcaactcttccc
aggccggctacagcaggaggcagtggagaaaatggacgagtggtcagccacgatttcccc
aaatccatgcaggcgattccgtgcatgagtcacagcactgggatgtccctgggagctacg
ggattataa
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