Chelonoidis abingdonii (Abingdon island giant tortoise): 116820002
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Entry
116820002 CDS
T07367
Symbol
CSF1R
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04010
MAPK signaling pathway
cabi04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116820002 (CSF1R)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116820002 (CSF1R)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cabi01001
]
116820002 (CSF1R)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cabi04090
]
116820002 (CSF1R)
Enzymes [BR:
cabi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116820002 (CSF1R)
Protein kinases [BR:
cabi01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116820002 (CSF1R)
CD molecules [BR:
cabi04090
]
Proteins
116820002 (CSF1R)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
V-set
Ig_PDGFR_d4
Ig_4
C2-set_2
Izumo-Ig
SAMD1_WH
APH
Motif
Other DBs
NCBI-GeneID:
116820002
NCBI-ProteinID:
XP_032628059
LinkDB
All DBs
Position
7:complement(104513282..104544499)
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AA seq
968 aa
AA seq
DB search
MEPAILVLLVAAGIWHGSASLTLDPNVTAMIVNKGAPVNLHCSGDFSVEWVSTRHNMIVY
STGTTSTLSITSASYRDTGTYQCAYTNSSDMERASVHLFVRDPEKVWYVHSISVRVSEGR
DAQLPCLITDPEYGSNITLLKDDNSPVLPGTEFSFSPRDGVTIYNVKQAHKGYYRCGALI
NGKVERSSKIRLIVLKETVNPLSVTVEQKDHVRIQGESFQITCNLMSPSYKYNIKWIHPA
QNVTITTNTTFEQEVYYVSITLYIPAVTIGDSGQYSCVANNSVGSSNSSTVLQVVERGYV
RLLPIQNSSHEVKLGGNLELRVLIEAYPRLSNWSWTHENLSQHSVSTRLNDKMVPGNNRY
NTTLSLNRLKEDERGLYTFYAANDAANASVTFSITLKFLPEIHHVGTVFNNSTSLHCTAS
GYPAPHIEWYQCPGHADRCDQGRCVSAAVSRLIWNDTNPWVISKLPFGKVEVESILQIKE
FEYNVTFCCWAINSEGNDSQMHNTEKIRMLPNELFNPILSTPLGILVVFLLLLLLFLLYK
YNQKPKYQVRWKIIEACEGNNYIFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEA
TAFGLGKEDTVLKVAVKMLKSTAHTDEQEALMSELKIMSHLGHHENIVNLLGACTFGGPV
LVITEYCHYGDLLNFLRKNAESIIIQDSSLDSSLESTADYKNIYLEKKYVRSDSGFASQC
LETYVEMRPVPSDSMPAGSKLQGKNAEEEQDTRPLDLCDLLQFSNQVAQGMAFLASKNCI
HRDLAARNVLVTHGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCIYTVQ
SDVWSYGILLWEIFSLGKSPYPGMLVNSKFYSMVKQGYQMARPDFAPMEMYRIMQACWNL
QLTQRPTFDQICHFIQKQLDANKEQEYTNLPSSSEEDNGCEPSGCCEESCDQAESSQPLL
KSNNYQFC
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgccatcctggtgcttctggtggcagctggcatctggcatggctcggcatct
ctgacactcgaccctaatgtcacggccatgattgtgaacaagggagcccctgtgaacttg
cactgctctggggatttcagcgtggaatgggtcagcacaagacacaatatgatcgtgtac
tccactggcactaccagcactctcagtattaccagtgccagttacagggacactggcacc
tatcagtgcgcttataccaacagcagtgacatggagcgagcatccgtccatctctttgtg
agagatcccgagaaggtgtggtatgtccatagcatcagtgtcagagtaagcgaaggccgt
gatgcacagctgccatgtctgatcactgacccagagtatgggtctaacattaccctgctg
aaggatgataattctccagtcttaccagggaccgagttttctttcagccctcgggatgga
gtaaccatatacaatgtgaagcaagctcataaaggatattacaggtgtggggccctgatc
aatggaaaagtggagaggtcatcgaaaatccgactgattgttctgaaagaaacagtaaat
ccgctctcagtcacggtggagcaaaaagaccatgtgcgaatacagggggaaagtttccag
atcacctgcaatttaatgtctccttcctacaagtacaacatcaagtggatccatccggct
cagaatgtcaccatcacaaccaacaccacctttgaacaagaggtctattacgtttccatc
accctatacattccagcggtgacaataggagacagtgggcaatacagttgtgtagcaaac
aattctgtgggatccagtaattcttcaactgtgctccaggttgtagagagaggttatgta
cgtctgttgcccatacagaacagcagccacgaagtaaagttgggaggaaatctggaactg
cgggtcttgattgaggcttaccctagacttagcaactggagttggacacatgagaatctt
tcccagcactctgtgagcacccgactcaacgacaaaatggtccctggtaacaacaggtac
aacaccacgctctccctgaaccggctgaaagaagatgaaaggggactgtatacattctat
gctgcgaatgatgcggccaatgcatccgtgaccttcagcatcaccctgaaattcctgcct
gagatccatcatgttgggacggtattcaataactcaacgagccttcactgtacagccagt
ggttatcctgctccacatattgagtggtatcagtgccctgggcatgcagacagatgtgac
cagggaagatgtgtttctgcagctgtgtccagactgatttggaatgacaccaacccatgg
gtcataagcaaattgccctttggaaaggtggaagtagagagcatccttcagattaaagag
tttgaatacaatgttaccttttgctgctgggccattaacagcgaggggaatgactcacag
atgcataacacagaaaaaatccggatgctcccaaatgagctcttcaaccccattctctcc
acccctttaggaatattggtcgtgtttctcctgctgctgctcctcttcctgctgtacaaa
tataatcagaaaccaaaataccaggtgcggtggaagattattgaggcctgcgaagggaat
aactacatctttattgaccccacccaattgccttacaatgagaaatgggaattccccagg
aacaacctgcagtttggaaagactctgggagcaggagcctttggaaaagtggtagaagcc
actgctttcgggctggggaaggaagacactgtcctcaaagtggctgtgaagatgctcaaa
tcaacagcccacacagatgaacaggaggcccttatgtctgagctgaaaatcatgagtcac
ttgggccaccatgagaacattgttaacctgctgggagcctgtacttttggaggcccagtt
ctggtcatcactgagtactgtcactatggagatctgctgaatttcctgcggaagaacgca
gagtccataatcatccaggactcaagcctggactcctctctggaaagcacagccgattac
aaaaacatctatctggagaagaagtatgtccgaagtgatagtgggtttgcaagccagtgt
ttggagacctatgttgaaatgagacctgtgccatcagattccatgccagcagggagtaag
ttacaaggcaagaatgcagaggaagaacaggatactcggcccctggatctgtgtgacctg
ttgcagttctccaatcaagtggcccagggaatggccttccttgcctcaaagaattgcatc
catcgggacttggcagcaaggaatgtgctagtgacccacggacgagtagccaaaatctgt
gactttgggctggcgagagatatcatgaacgattcaaactatgttgtcaaaggcaatgcc
cgtctgccggtgaaatggatggccccagagagtatcttcgactgcatatacactgtgcaa
agtgatgtctggtcctatggcatcctcctctgggagatcttctcactgggtaaaagccca
taccctggcatgctggtgaatagcaagttttacagcatggtgaagcaggggtatcagatg
gccagaccagactttgctccgatggaaatgtatcgcatcatgcaagcatgttggaatctg
caactcacccaacggcccacctttgaccagatatgccatttcattcaaaaacaactggac
gccaacaaggaacaggagtatacaaacctccccagcagctcggaggaagacaacgggtgt
gagccttctggctgctgtgaagagtcctgtgaccaagcagagagcagtcagcctcttctg
aagagcaacaattaccagttctgttaa
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