Chelonoidis abingdonii (Abingdon island giant tortoise): 116820077
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Entry
116820077 CDS
T07367
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116820077 (RNF38)
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116820077 (RNF38)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116820077 (RNF38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
116820077
NCBI-ProteinID:
XP_032628188
LinkDB
All DBs
Position
6:complement(128316756..128418496)
Genome browser
AA seq
432 aa
AA seq
DB search
MRPWEMTSNRQPPSARPNQHHFSGERCNTPARNRRSPPVRRQRARRDRLSRHNSISQDEN
YHHLPYGQQQAIEEPRAFHPPNVSPRMLHPAAHPPQQNAVMVDIHEQIHQGTVPVSYTVT
TVAPHGIPLCTGQHIPACNTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF
PPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG
FTYPPSAHPPTLTPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPP
YHPSLLPYVLSMLPVPPAVGPAFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI
EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC
RADASEVHRDSE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatgggagatgacatcaaataggcagcctccttcagctcgacccaaccaacat
cacttctcaggggaacgatgcaacacacctgcacgcaacaggaggagtcctcctgttaga
cgccagagagcaagaagggatcgcctgtctcgacataattccattagtcaagacgaaaac
tatcaccatctcccctacggacagcaacaagcaatagaagagccccgagccttccaccca
ccgaatgtatccccccgtatgttgcacccagccgctcatccgccacagcagaacgcagtg
atggtcgacattcatgaacagatccaccagggcacagtccctgtctcatacacagtaaca
acagtggcaccacatgggattccgctctgcacaggccagcacataccagcttgtaacaca
cagcaggtcccaggatgttcggtggttttcagtggacagcaccttcccgtctgcagtgtg
cctcctccaatgcttcaggcatgctcagtccaacacttaccagtaccatacgcagcattc
ccaccccttatttctagtgatccatttcttttgcatcctcctcacctctctccgcaccat
cctcctcacctgccaccgccaggccagttcgttcccttccaaacacaacagtcacggtcg
ccacttcaaaggatagagaacgaagtagaacttcttggagaacaccttccggtaggaggt
tttacctaccctccctcagcccatccaccaacattgactccctcagcccctctccagttc
ttaacgcatgaccctttacaccaggaggtgtcatttggagtaccttatccaccctttatg
cctcgaagactcacagggcgcagtagataccgatcccagcagccaataccaccaccccct
tatcatcccagcctgttaccatatgtgctatcaatgcttccggtgccacctgcagttgga
ccagctttcagcttcgagttggatgtggaagatggagaggtggaaaactatgaggcgctg
ctgaatttggcagaacgattgggagaagccaaaccacgaggactgacaaaagcagacatt
gaacagcttccatcttacaggttcaatccaaacaaccaccagtcagaacagactttgtgc
gtagtatgcatgtgtgattttgaatcaaggcagctacttagagtcttaccttgtaaccat
gagttccatgccaagtgtgtcgataaatggcttaaggcaaatcgtacctgcccaatttgt
agagctgatgcttcagaagtgcatcgtgattcagaatga
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integrated database retrieval system
