Chelonoidis abingdonii (Abingdon island giant tortoise): 116820133
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Entry
116820133 CDS
T07367
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116820133 (CHD1)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116820133 (CHD1)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
116820133 (CHD1)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
116820133 (CHD1)
SLIK complex
116820133 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
DUF7855_C
Motif
Other DBs
NCBI-GeneID:
116820133
NCBI-ProteinID:
XP_032628274
Ensembl:
ENSCABG00000014281
LinkDB
All DBs
Position
Unknown
AA seq
1804 aa
AA seq
DB search
MNGHSDEESIRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSREKKQVQAKPPKVGGAEFWKSNPSILAVQRSAMLRKQQQQKAASSNSGSEE
DSSSSEDTLDDSSSETKRKKHKDEDWQMSGSGSVSGTGSDSESEEDREKSSCEESESDYE
PKNKVKSRKPPSKIKPKSGKKSAGQKKRQLDSSDEDEDDDYDKRGSRRQATVNISYKEAE
ETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRVGRKAATGATTTIYAVEADGDPNAG
FDKSKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNA
SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDG
ALIAKKFQSCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQL
NGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQ
REIQTWAHQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGL
NWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS
SWEDFEEEHGKGREFGYASLHRELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYY
KWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRS
SGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQA
LDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQ
VNIYRLVTKGSVEEEILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELS
AILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSN
MDEDDIGLEPERNSRNWEEIIPELQRRRLEEEERQKELEEIYMLPRMRNCAKQINFNGSE
GRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLE
RLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGQERAGGRLGKVKGPTFRISG
VQVNAKLVISHEEELAPLHKSIPSDPEERKRYAIPCHTKAAHFDIDWGKEDDSNLLIGIY
EYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLS
GAGNSKRRKTRTKKNKVIRLAKVKEEIKSDSSPLLSEKSDEEEDNKDEITSVKHSNKKIK
TEKEDDEKSEPDIGIKKEVEEKRETKEKENKRELKREKKEKEDKKELKEKDMKEKRESKV
KESTQKEKEAKEEKINEVKSDNRDKIRKATSADTPVHITAISEPVPISEESEELDQKTFS
VCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPELIKQWR
KNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPADVERLKE
NTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKDHRDWDHYK
QDSRYYSDNKHRKLDDHRSRDHRSSLEGNLKDSRSHSDHRSHSDHRIHSDHRSSSEYSHH
KSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPLGHRSPFEHSADHKSTPEHTWS
SRKT
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaggaaagcataagaaacagtagtggagaatcaagccagtca
gatgatgattctggttcagcatcaggttctggatctggttcaagttctggaagcagtagc
gatggaagtagcagccagtcaggtagcagcgactctgactctggttcagagtcaggcagt
cagtcagaatcagagtctgacacatctagagagaagaaacaagttcaagcaaagccacca
aaagttggtggagctgagttttggaaatcaaatccaagtattttggctgtacagagatca
gcaatgctcaggaagcagcagcagcagaaagcagcttcatcaaacagtgggtcggaagag
gattcctctagtagcgaagacactttggatgactcatccagtgagaccaagaggaaaaaa
cataaagatgaagactggcaaatgtctggatcaggatctgtctctgggactggttcagat
tctgaatcggaggaggatagagagaaaagcagttgtgaagagagtgaatctgactatgag
ccaaaaaataaagtgaaaagcaggaaacctccaagcaaaattaagccaaaaagtgggaaa
aagagtgcaggacagaaaaagaggcaactcgattcatctgatgaggatgaagatgatgat
tatgataaaagagggtctcgtcgccaggcaacagtcaacattagttacaaagaagctgaa
gaaacaaagaccgattcagatgacttgctggaagtctgtggagaggatgtcccgcaacct
gaagaagatgaatttgaaaccatagaaaagtttatggatagtcgtgttggacgaaaagca
gccactggtgctacaactaccatctatgcagttgaggcagacggtgatccaaatgcaggg
tttgataaatcgaaggagccaggagaaatacagtatctgattaaatggaaaggctggtcc
catatccataatacatgggagactgaagaaaccttgaaacagcagaatgttaaaggaatg
aagaaactggacaactacaagaaaaaggatcaggaaacaaaacgatggttgaaaaatgct
tctccagaagatgtggaatattataattgccagcaagaacttacagatgatctgcataaa
caatatcaaatagtggagagaataattgctcattcaaatcagaagtcagcagcaggttat
ccagattattattgcaagtggcagggtctcccttactcagagtgcagctgggaagatggt
gctctcattgccaaaaaatttcagtcatgcattgatgagtattttagcagaaatcaatcc
aagacaactccttttaaggactgcaaggttttaaaacagaggccaaggtttgttgcactg
aagaagcaaccatcatatattggtgggcatgaaggtttagagttaagagactatcagtta
aatggactaaactggctcgctcactcctggtgcaaagggaacagttgtattcttgcagat
gaaatgggtttgggtaaaacaatacaaactatttcttttctgaactacctgtttcatgaa
catcagttgtatgggcctttcttgctggttgtgccgctttctactttgacatcttggcaa
agagaaattcagacatgggctcatcagatgaatgctgtggtttatttaggagacatcaat
agcagaaacatgataagaactcatgaatggatgcatccacagaccaagcggttaaaattt
aatattcttttgacaacttatgaaattttgctaaaggataagtctttccttggtggtcta
aattgggcatttataggagtggatgaagctcatcgtttgaaaaatgatgattcccttcta
tataagacgctaatagactttaagtcgaaccatcgtcttcttatcactggaactcctctg
caaaactccctcaaagagctctggtctttgctgcacttcatcatgccagaaaagttttct
tcctgggaagattttgaagaggagcatggcaaagggagagaatttggctatgcaagtctt
cacagagagcttgagccatttctgttacggcgggttaagaaagacgtagaaaaatctcta
cctgccaaggttgaacagattttgagaatggagatgagtgcattgcagaagcaatattac
aagtggattttaaccaggaattacaaagccctgagtaaaggttcaaagggcagtacctca
ggctttttgaacatcatgatggaactcaagaagtgttgtaaccattgctacctcattaaa
ccaccagatgacaatgaattctataataaacaagaggccttacagcatttaatccgtagc
agcgggaaactaatccttcttgacaagctactgattcgcctaagggagcgtggcaacaga
gttcttattttctctcagatggtgaggatgctggacattctagcagaatatttgaagtat
cgtcagttcccctttcagagactagatggatcaataaaaggggaattgaggaagcaagca
ctggatcattttaatgcagaaggatcagaggatttctgctttttactgtctacaagagct
ggagggctaggtataaacttggcatctgctgacaccgtagttatatttgattctgactgg
aacccacagaatgatctgcaggcacaagctagagctcataggattggccaaaagaaacag
gttaatatttatcggctagtcacaaagggatcagtagaggaagaaattcttgaaagagcc
aaaaagaagatggtgttagatcatttagtaattcagagaatggacactacagggaagact
gtactccacacaggttccactccttcaagctctactccttttaataaggaggagttgtca
gcaattttaaagtttggtgctgaggaactttttaaggaacctgaaggagaagagcaggag
ccacaggaaatggatatagatgaaatcttgaagagggctgaaacacgagaaaatgagcca
ggtcctttaactgtaggagatgagttgctttcccagtttaaggtggccaatttttcaaat
atggatgaagatgacattgggttggagcccgaacgaaattcaaggaactgggaagaaatc
attccagagctccaaaggcgaagattagaagaggaggaaagacagaaggagcttgaagaa
atttatatgctaccaagaatgcgaaactgtgcaaaacagatcaatttcaatggaagtgaa
gggaggcgtagtaggaacagaagatactctggttctgatagtgattctatctctgaaaga
aaacgacccaaaaaacgaggaagaccacgcactattccacgagagaatattaaaggattt
agtgatgcagagattaggcggtttatcaagagttacaagaaatttggtggccctctggaa
aggctagatgctatagctagagatgctgaattagttgataaatctgagacagaccttagg
cgattgggggaactggtacacaatggatgcattaaggctttaaaggacaattcctctgga
caagaaagagcagggggcagacttggaaaagttaaaggcccaacattccgaatatcagga
gtacaagtgaatgcaaagctagtcatctctcatgaggaagagttggcaccattgcacaag
tctattccttcagatccagaagaaaggaaacgatatgccattccatgccacactaaggca
gctcatttcgatatagattggggcaaagaggatgactccaatcttttaataggcatctat
gaatatgggtatggtagttgggaaatgataaaaatggatcctgacctcagcctgacacac
aagattctaccagatgatccggataagaaaccccaggccaagcagttgcagactcgggca
gactacctcattaaattactcaataaagatcttgcaaggaaggaagcacaaagactttct
ggtgcaggaaactcaaagaggaggaagacaagaactaagaagaataaagtgataagactt
gcaaaagttaaagaggagataaaaagtgattcttctccactgctctcagaaaaatctgat
gaagaggaggataacaaggatgagatcacttcagtgaaacattcaaataaaaaaattaaa
acggaaaaagaagacgatgaaaaatctgagccagatattggtataaagaaggaggttgaa
gaaaagagagaaacaaaagaaaaggaaaacaagagggaactgaaaagggagaaaaaagaa
aaagaggataagaaagaattaaaggaaaaagatatgaaagaaaagagagaaagcaaagta
aaggagtccacacagaaagaaaaagaagcaaaggaagagaagattaatgaagtcaaatct
gacaacagagacaaaatcaggaaagctacatcagcagatactccagttcatattactgca
attagtgagccagttcctatatctgaagaatcagaagaactggatcagaagacattcagt
gtatgcaaagaaagaatgaggcctgtcaaagcagcgctgaaacagctagatagaccagaa
aaaggtctttcagaaagggaacagctggagcatactagacagtgtctgatcaaaattggg
gatcacatcactgaatgtctaaaagaatacacaaatcctgaacttattaagcagtggagg
aaaaatttgtggatttttgtttcaaagtttacagaattcgatgccagaaagctgcacaaa
ctatataaacacgcaatcaaaaaacgccaggaatctcagcaacacaatgaccagaacatc
agcagcaacgtgaacacacatgtgattagaaatccagcagatgtggaaagactgaaagag
aatacaaaccacgatgacagtagcagggacagttattcctctgacagacatttgtcacaa
taccacgatcatcacaaagacaggcatcagggagatgcttacaaaaaaagcgactctaga
aaaaggccctattctgccttcagtaatggaaaagatcacagggattgggatcactacaaa
caggacagcagatactacagtgataataaacatagaaagctggatgaccacaggagtaga
gatcacagatcaagcctggaaggaaatttaaaagacagtcggtctcattcagaccaccgt
tctcattcagaccaccggatacactcagatcaccgatccagttcagagtacagccatcat
aaatcttccagggactatagataccactcagactggcaaatggaccatagagcttccagt
agtggcccaaggtcaccactagatcagaggtctccttatggctcaaggtctcccttagga
cacagatctccatttgaacactcagcagatcacaaaagtacacctgaacatacatggagt
agccggaaaacataa
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integrated database retrieval system
