Chelonoidis abingdonii (Abingdon island giant tortoise): 116820149
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Entry
116820149 CDS
T07367
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116820149 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cabi03032
]
116820149 (POLA1)
Enzymes [BR:
cabi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116820149 (POLA1)
DNA replication proteins [BR:
cabi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
116820149 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
116820149
NCBI-ProteinID:
XP_032628306
Ensembl:
ENSCABG00000019649
LinkDB
All DBs
Position
Unknown
AA seq
1497 aa
AA seq
DB search
MAESGSRRGTTSDLGSFALSRSRREKKSKKGHQEALELLKKAKAGEKVKYEVEEFTSVYE
EVDEEQYSKMVRERQDDDWIVDDDGIGYVEDGREIFDEDLEDDVLGSKKKVGKGDKTSTN
DTKNVKKSVVSKPNTIKSMFMASAGKKNTDKTVDLSKDDLLGDILQDLNAETVQITPPPV
VKLKKKRPVGASLNPFSVHSQAHTVVTPIVRKAPTTVRKEVLSPTTSDPKHTTYAAKPVA
VHKENGAEYTIKAAENEELVKAKPEKAIQENDQSMMDFEDGDFDEPMEADIPETAGALKK
EQKLEKKETQQVDSVKEDASFLSSFLPDMSCWTRMDKDEIDLVASEVQVDPSCLPLVNGK
DGDQVFRFYWLDAYEDQYSQPGVVFLFGKVWIESAETYVSCCVTVKNIERTIYLLPREMQ
VDLTSGKETENPVTMMNIYQEFNDQIAVKYKIMKFRSKKVEKNYAFEIPDVPAKSDYLEV
RYSAEVPRLPQDLKGETFSHVFGTNTSSLELLLMSRKIKGPSWLEIKKPQPLSQSVSWCK
VEAMALKPELVNVVKDPPPPPPLVIMSLSMRTIQNVKTHQHEVMAVAALVHQRFCLDKAP
PQPPFQTHFCVISKPNDCIFPYDFNEIIKSKNSNVEIAATERTLLGFFLAKIHKIDPDII
VGHNIYGFDLEVLLQRINVSKVPHWSKIGRLRRSIMPKLGGRGGFAERNAACGRMICDVE
ISAKELIRCKSYHLSELVHQILKIERVTIPPEEIRNMYSDSSHLLYMLENTWTDARFILQ
IMCELNVLPLALQLTNISGNVMSRTMMGGRSERNEFLLLHAFYERDYIVPDKQVFKKPQQ
KLVDEDEDVEDQNKSKIGRKKAAYAGGLVLDPKVGFYDTFILLLDFNSLYPSIIQEFNIC
FTTVQRVSSDAQKRAEDGVQEEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQPDLN
PDLYLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMN
LEVIYGDTDSIMINTNSTNLEEVFKLGNKIKSEVNKLYKLLEIDIDGVFKSLLLLKKKKY
AALTVEPTGDGKYVTKQELKGLDIVRRDWCDLAKETGNYVIGQILSDQSRDAIVENIQRR
LIEIGENVINGRVPISQFEINKALTKDPQDYPDKKSLPHVHVAMWINSQGGRKVKAGDTV
SYVICQDGSNLSASQRAYAPEQLQKQENLTVDTQYYLSQQIHPVVARICEPIDGIDSVLI
ATWLGLDPSQFKVHHHYHKDEENDALFGGPAQLTDEEKYRDCERFKFSCPRCGTENIYDN
VFDGSGKLMEPSLQQCSKKECDESPFNYMIQMNNKLLLDIRRHLKSYYNSWLICEEPTCR
NRTRRLPLSFSQNGALCQACKKAILRPEYSDKALYTQLCFYRYIFDVDYAMEKVITDQEK
ESMKRKLTINETEVYRKLKNTVDKFLSSSGYSEVNLGKLFQTFSIIKSVRDLSNERQ
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagcgggagccggcgcggcactacatcagacttgggcagttttgcactgtca
cgttctcggcgtgagaaaaaatctaaaaaaggacaccaagaagctctagaactcttgaaa
aaggccaaggcgggtgaaaaagtaaaatatgaggttgaggagttcacaagtgtttatgaa
gaagttgatgaagaacaatactccaagatggtcagggaacgccaggatgatgattggatt
gtagatgatgatggcataggttatgtagaagatggaagggagatctttgatgaagatcta
gaagatgatgtccttggttccaagaagaaagtaggaaaaggtgacaaaacatccacaaat
gacacaaagaatgtgaagaagtctgtggtgtcaaagccaaacactatcaagtctatgttt
atggctagtgctgggaagaaaaacacagataaaactgtagacttgtccaaggatgactta
cttggggatattctgcaagatctgaatgctgagactgttcagataactccacctccagtt
gtgaagctaaaaaagaaaagacctgttggagcttcactgaatcctttctctgtacattca
caggcccatacggtagtaacccctatagtaaggaaagctcccaccactgtcagaaaggaa
gttctttctccaactacctctgatcctaagcataccacttatgcagcaaaacctgttgca
gtccataaagagaatggtgctgaatatacaataaaagctgcagaaaacgaagaactggtg
aaggcaaaaccagagaaagctattcaagaaaatgatcagagcatgatggattttgaggat
ggggattttgatgaacctatggaagcagatataccagagactgccggtgccctgaagaaa
gaacagaaactagaaaagaaagagacacagcaagtagattctgtgaaggaagatgcatcc
tttttaagttcttttctccctgatatgtcctgttggaccagaatggataaggatgaaatt
gatttagttgcctcagaagttcaagtggaccccagttgcctgccactagtgaatgggaaa
gatggtgatcaagtctttaggttttattggctggatgcttacgaagatcagtatagtcaa
ccaggtgtggtatttctgtttggtaaagtatggattgaatcagcagagacttatgtcagc
tgttgtgtgacagtgaaaaacattgagagaactatctatctactgccacgtgagatgcaa
gttgacctaacttctggtaaagagacagaaaatcctgtgactatgatgaacatctaccaa
gaatttaatgaccaaattgctgtaaaatacaagatcatgaagttcagatccaagaaagtg
gaaaagaattatgcttttgagatcccggatgttccagcaaagtctgactacctagaagtt
aggtactcggctgaggtccctcggcttcctcaagatctgaaaggagagacattttctcat
gtatttggaacgaacacttctagcctggaacttctcttgatgagtaggaagatcaaagga
ccaagctggctggaaataaaaaaaccacagcccttgagtcagtcagtcagttggtgtaag
gtggaggcaatggcactgaaacctgagttggtgaatgtagttaaagatcctcctcctcct
cctcctcttgtgatcatgtctctcagcatgaggacaattcagaatgtgaagactcatcag
catgaggtcatggctgttgcagctctagtccatcaaagattttgtttggataaagcacct
cctcagcctcctttccagacacacttctgtgttatttccaaaccaaatgattgtattttc
ccttatgacttcaacgaaatcattaaaagcaagaattctaacgtagagattgctgcaacg
gaaaggacattgctgggttttttccttgcgaagattcacaaaattgatccagatattatt
gtgggtcataatatttatggctttgatctggaagtgctgctgcagagaattaatgtgagc
aaagtccctcactggtccaagataggtcgactaaggaggtccattatgccaaagcttggg
ggtcgaggcggctttgctgaaaggaatgcagcctgtggtcggatgatctgtgatgtggaa
atttcagcaaaggaattaattcgctgcaagagctaccatttatctgaattggtccatcag
attttgaaaatcgagagggtaacaattccaccagaagaaataagaaatatgtacagtgat
tcgtctcacttactgtacatgctggagaacacctggacagatgccagattcattctgcaa
atcatgtgtgagctgaatgttcttcccctagccctgcagcttacaaacatctctgggaat
gttatgtcaaggacaatgatgggtggtcgatcagagcgtaatgagttcctgctacttcat
gctttttatgagagagactatattgtgcctgacaagcaagtttttaaaaagcctcagcag
aagctggtggatgaagatgaagatgttgaagatcagaataaatcaaagatagggagaaag
aaggcagcatatgctgggggtctagtcttggatccgaaagtgggtttttatgacacattt
attttgcttctggacttcaacagcttgtacccttcaattatccaggagttcaacatatgt
tttaccacagtgcagagagtgtcatcagatgcacagaaaagggcagaggatggagtgcaa
gaagaaattccagaactaccagatccgtctctagaaatgggaattttgcctaaagagatc
agaaagctggtggagagaaggcgacaagtcaagcaattgatgaaacagccggatttaaat
cctgacctctatttacagtatgatatcaggcagaaggctttgaagcttacagctaatagc
atgtatggctgtctggggttttcctacagtagattctatgccaagcctctggctgctttg
gtgacacacaaagggagagagattttgatgcatactaaggagatggtgcagaagatgaac
cttgaagtgatttatggagatacagattccattatgataaatacgaatagcaccaacctg
gaggaggttttcaagctggggaacaagattaaaagtgaagtgaacaagctgtacaaattg
ttggagattgatattgatggggtcttcaagtccctgctgctgttgaagaagaagaagtat
gctgctctgacggtggagccaacaggagatgggaaatatgttaccaaacaggaattgaaa
ggattggatatagtccgaagagactggtgtgaccttgcaaaagaaactggaaactatgta
attggtcagattctttctgaccaatcccgagacgcaatcgtggaaaacattcaaagacga
ctaatagaaattggagaaaatgtgataaatggcagagtcccaataagtcaatttgaaatt
aacaaggcattgacaaaggatcctcaggattatcctgacaaaaaaagcttgccacatgtg
catgttgccatgtggattaactctcaaggaggccgaaaggtgaaagcgggagatactgtg
tcgtatgtgatctgtcaggatgggtcaaatctgagtgccagccagagagcgtatgctcca
gaacagctgcaaaaacaagaaaatcttactgttgatactcagtactatctgtcacaacag
attcacccagtagtggctcgaatctgtgagcccatagatggaattgactctgttctcatt
gcaacgtggttaggactggatccctcccaattcaaagtccatcaccattaccataaagat
gaggagaacgatgctttatttggtggcccagctcagctcactgatgaggagaaatatagg
gattgtgaaagattcaagttttcctgtccaagatgtggaacagagaacatttatgacaat
gtctttgatggttcgggaaagcttatggaacccagcttgcaacagtgcagtaagaaagaa
tgtgatgagtcccctttcaactatatgattcaaatgaacaacaaactactcttggatatt
agacgtcacttaaaaagctactataatagttggttaatatgtgaggagccaacttgccgg
aatcgaacccgtcgccttcccctcagtttctcccagaatggtgctttatgtcaggcctgt
aagaaggctatcctcagacctgaatattccgacaaggccctgtacacccagctgtgcttt
taccggtacatttttgatgtggactatgcaatggagaaagttattactgatcaagagaaa
gaaagcatgaagaggaagctgaccataaatgagacagaggtttacagaaagttgaagaac
acagtagacaaatttctgtcctcaagtggctattctgaagtaaacctcggcaaactcttc
cagactttcagtataataaaatctgtgagagatctcagtaatgaaagacaatga
DBGET
integrated database retrieval system
