Chelonoidis abingdonii (Abingdon island giant tortoise): 116820218
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Entry
116820218 CDS
T07367
Name
(RefSeq) protocadherin beta-1-like
KO
K16494
protocadherin beta
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116820218
Cell adhesion molecules [BR:
cabi04515
]
Cadherins
Protocadherins
116820218
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
116820218
NCBI-ProteinID:
XP_032628425
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MADKKRRTTIKRQVASLVLFLCVWALGCETVRYAVPEEMESGSFVANVANDLGLDPKGLS
ARRARVVSEGIRQHFQLNSNTGNLFITEKLDREELCAQTDPCILYFEIILENPLQSYRGE
VRVYDVNDHSPEFSDNELLLKMPESTPPGSRFPLASAQDLDVGNNSLQSYAISSTDHFRV
CTRHRSDGRKYAELVLETPLDREEQAEISFMLTAIDGGSPALSGAAEIRITVLDINDNVP
EFSQTLYRARVLENSEQDYVVLTVSATDLDEGINGAISYSFSLKSKKNVSAFSINPVTGK
IRLLGPLDFEETEIYEIDVQATDGGGLSAHSEVLVEVVDVNDNAPEVKVTSLVSLIPEDS
APETVVALFNVRDRDSGDNGRIVCSIEDDLPFSAKPTSKNSYSLVTENAFDREKVSEYDI
TIAARDLGTPTLSTEERIIVKISDINDNSPEFSQTSYTMYVRENNGPAVLIGKVNAFDSD
SEQNAKVTYSLWPAEVGGLPLLSYISINSENGNVYALRSMDYEQIREFQVTVRAADGGSP
PLSSEVIVRVVIIDENDNAPFILYPLQNSSSPANDLVPRSAEAGYLVAKVVAVDGDSGQN
SWLSYHLMKATDPVLFTIASQNGEIRTTRLITDRDTMKQKLIVVVRDSGELPLSSSATLN
IALVDGFSDLHMRFTDAAVEEEENGTLTMYLIISLCLVSFVFFISIIVFITIKLYRRRVY
GERFMSASGNFYGNSNFQNNLIDVKGNGTLSHSYRYEVCLTTGSGNSEFKFLRPIIPSLP
PQHVIAGMDSGKEQDLLTNFQLNTDAESANELAPLLSELGYLVTKVVAVDAEAGQNAWLS
YQLLKATEPGLFSVGLHSGEIRMARYFLDTDALKRSLVVLVKDNGQPPLSAMATVMVAVI
DS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagaagaggagaacaacaatcaaaaggcaagtcgcttctctcgttctattt
ctttgcgtgtgggccctcggatgcgagaccgttcgctatgctgtaccggaggaaatggag
agcgggtcctttgtggctaatgtagcaaatgatctagggctagacccgaagggactgtct
gctcgcagggcccgtgtggtttccgaaggcattcgccagcatttccagctaaatagcaac
accgggaacttgtttattacagagaaactggacagagaggaactgtgtgcgcaaactgac
ccctgcattttgtattttgaaataatcctggaaaatcccttgcagtcctatcgtggtgag
gtaagggtttatgatgtaaatgatcattctccggagttctcagataatgagctgcttctg
aagatgcccgaaagtactccgcctgggtcccgattccccctggcaagcgcccaggattta
gatgtcgggaacaacagcttgcagagctacgccatcagttcaacagaccatttccgcgta
tgcactcgccatcgcagcgacggcaggaagtacgcggagctggtgttggagacacctttg
gatcgagaggagcaggcagaaattagcttcatgctgactgcgatagacggaggctcccca
gcgctgtccggagcagcggagatacgaataactgttctggatatcaatgataatgttccc
gagttttcccaaactctttatagagcacgggttttggaaaattccgaacaagattatgtg
gttctgacagtttccgcaactgatttagacgaagggattaatggcgcaatatcatattca
tttagcctaaaatccaagaagaatgtcagcgcattcagtataaacccggtaactgggaag
attcgacttttgggaccactagattttgaggaaacagaaatctatgaaatagacgttcaa
gctacagatggcggggggctgtcagcgcacagcgaagtcctggtggaggtggtggatgtc
aatgacaatgccccagaggtgaaagtaacatctcttgttagtctgataccggaagattcc
gctcctgagaccgtggtggccctcttcaatgtcagagaccgggattccggggacaacggg
agaatagtctgttccatagaagacgatctgccgttttctgcaaaaccaacttcaaaaaat
tcctactctttagtgaccgaaaatgcatttgaccgagaaaaagtatcggagtatgacata
accatcgcagccagggatttgggtactcccactctttctactgaagagagaatcatcgtg
aaaatatccgacattaatgacaattctccagagttcagtcaaacatcatacactatgtat
gtccgagaaaataatggtccggctgtattgatagggaaagtcaatgcttttgattcagac
tcagagcagaatgccaaagtgacatactctctatggcctgctgaggtaggcggccttcct
cttctctcctatatctccataaactcggaaaacgggaatgtgtacgctctgcgatccatg
gattatgaacaaataagagagttccaggttacagtgagagctgcagatggcgggtccccg
ccactgagctctgaagtcattgtccgggttgtgataattgatgaaaatgacaacgccccc
ttcattttataccctctgcagaacagcagctccccagctaatgacctggttcccagatcg
gcggaggcgggttacctggtggcaaaggtggtggctgtggatggagattccggtcagaat
tcttggctttcctatcacttgatgaaggccactgacccagttctatttactatcgcttcc
caaaatggtgaaataagaaccacgaggctaataacagatcgagatacgatgaagcagaaa
ctcattgtggttgttagagacagcggagaattgcccctttcgtcatctgcaactttaaac
atagctctagtggatgggttttcggacttacacatgcggtttacagatgcagctgtggaa
gaggaagagaatggcacattaacgatgtacttaataatttccttgtgcttagtatcattt
gttttttttatttcaataatagtatttataactatcaagctttatagaagacgagtttat
ggagaaagattcatgtctgcttctggtaatttttatggtaatagcaacttccaaaataat
ttgatagatgtaaagggtaacggaactctgtctcacagttatcgttatgaagtctgttta
acgacgggatcaggaaacagcgaattcaaattcctcagacccattattccctctcttcca
cctcagcatgtcattgctggaatggactctggaaaagaacaggatcttcttactaacttc
cagctgaacacggacgcagaatcagcgaatgagttggcccctcttctctccgagctgggt
tacctggtcactaaggtggtggcggtggatgcagaggccgggcagaacgcctggctctcc
taccagctgctgaaggctacagagcctgggctgttctctgtgggactccacagtggcgag
atcaggatggcccgctactttctcgacacagatgcgctcaagcgaagtctggtggtttta
gtgaaggacaatgggcagccccctctctctgccatggccactgtcatggtagcagtcata
gattcatag
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