Chelonoidis abingdonii (Abingdon island giant tortoise): 116820282
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Entry
116820282 CDS
T07367
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04510
Focal adhesion
cabi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116820282
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116820282
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
CorA
F5_F8_type_C
NCOA6_TRADD-N
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
116820282
NCBI-ProteinID:
XP_032628516
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MAKPQRRALAVPGSPGTSHLPGWQEGGPGHCVGKREPCPTPLPITPSLFPLCPVHPGPTA
PHRSDLHPHSPRPAQPSPARRNPLPSLSPGWTPVPMELLLALLLLIQVPGAASQDKPGCS
AGSCHPATGNLLIGRAQNLSATSTCGLWGPQEYCIVSHLQDSEKCFSCDSRSPSLHNSHR
IQNVLYLSGRDGHPTWWQSENGVEHVSIRLDLEAEFHFTHLIMKFKTFRPAAMLIERSAD
FGRTWKVYRYFAYNCSRLFPAVAVQASGRVDQVLCEQRYSEIEPSSHGEVIFKVLDPSIP
VEDPYSPAIQDLLRVTNLRVNLTKLHTLGDNLLDSRREIQEKYYYALYELVLRGSCFCYG
HASECAPVPGAQANVEGMIHGRCVCRHHTTGLNCERCQDFYQDRPWRPAGGTDPPACQGC
NCXQHSRRAFDMACTVATGNASGGGVCDDCQHNTMXRSCQLCKPFYTQARRPTYRASSAA
AACDCDPVGSLDGGVCDSHTDVALGMIAGQCRCKEHVQGVRCDSCKEAFYGLSRTDPQGC
QPCRCDPRGIIAGSPPCDHISGDCYCKRFVSGRYCNQCLPEFWGLSNDMAGCRSCACDFG
GAYSNRCSMEDGLCPCRPHLIGRQCDQVQPGYFCAPLDYYSYEAEHATGHAPSHSMLPGA
LRPEAPPDCLEYSSGLPNGRKGRLRRQHSAMQLLQHRALSRRGRQPQHKPDVEVVSREHA
GHMITWTGPGFARVRDGAGLSFHISNIPYAMEYDILIRYEPESTEDWEASVSVSAQALPT
SPRCANVLPSEQRYQENLPHTQRFPFVPLRLGSPPPSSAMSAWLGSPPPPALMPCGLGLP
RFPPPRALSRGTLPVPAFCFAQDTSTRSPSAPAGNGPRPAALPPLDSLVLLPRVLELPAF
QGHNPAAVQHRKELERYLCQEAFRMATMPALAEMCARLLCSISALLHDGALACQCDPQGS
TSSMCQPVGGQCTCKPHVIGRRCDQCAPGTYGFGPSGCSREYLCRRGKRGGFSLSAVGRC
LEGYYGDPVLGSGQQCRPCPCPGYPGTRHYHGNSCHADQETNQIVCVCAPGYTGPRCDHC
SPGYFGAPEQEGGSCRPCQCNNNIDTSDPLACDPHSGQCLRCLHHTAGPRCADCQPGYHG
NALQRSCRRCTCNQLGTLPTHCTSGTCSCNQLTGSCPCRGHVVGRNCDQCAPGFWSFGGE
QGCKPCSCHPAHSLQQSCNMFTGQCPCRPGFGGRICADCQENHWGEPERECRTCDCDPAG
AESLQCERLSGRCACRPGFTGQHCDRCLRSFQDNFPRCDRCPPCFAQWDLALARLHNQLR
QLQEQAQALQEGGPGPELSSSCLQDLESKLRRTEQLVGDSSSQGAPLLRHLGRQLDDTRE
DMDEVWKQLQAAEGRLDGLAGADTEQRGRLANLSRELQEQNRTLSHQQEQLANWKEASFW
ESYWSIQTYSESSTQAAQRASASVQGPASPVGQAQCTRQATEELLRDTSSAFRRTLAAQR
SSLREAQKRVAALSISRLNERICGVKGDQDCQQAPCGGASCQDDSGQRRCGGPGCRGALP
VSTQALRTAQDVSRQLESAAGQLGTIALKVQEIQELARGARRRAQDTLDGSQAARGHMEE
STARLREFIRKIKDFLAEEGADPESIELVARQVLNISLPSSPSRIRHLLQKIQDSIRQLD
GVDAVLNSTAHGLAAAKELLTRAEQARQRPDPSPGHPHTLNPLTGAGEPLPPPLAGAPPP
VPPQLLFPGARPGRGLAWTLNREAERRLRGLQEKEAQVLRPLQALAKQVAALQDKARANR
GLAKEAKEKAERAVSATGELDQASALDTAPVPKGTMALS
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccccagcgtcgggcactagcagtaccagggagccctggaacctcccacctg
ccgggctggcaggaaggaggcccgggccactgcgtagggaagagggagccctgtcccacc
ccccttcccatcacccccagtctctttcccctctgccctgtgcaccctgggcccacggct
ccccacagatctgacctccacccacactcccctcgcccagcccagcccagcccagcccgg
cgtaaccctctcccctcgctctccccaggctggactccggtgcccatggagctgctgctc
gctcttctgctgctgatccaggtgcccggtgcggcgagccaggacaagccaggctgctcc
gcgggcagctgccacccggccaccgggaacctgctcatcgggcgggcccagaacctgagt
gctacgtccacgtgtgggctgtgggggccccaggagtactgcatcgtcagccacctgcag
gactcggagaaatgcttctcctgcgattcccggtccccgtctctgcacaacagccaccgc
atccagaatgtgctgtacctcagcggccgggacgggcaccccacctggtggcagtcagag
aatggcgtggagcatgtcagcatccgcctggacctggaggccgagttccacttcactcac
ctcatcatgaaatttaagactttccgtccggcggcgatgctgatcgagcgctcggcggat
ttcggtcgcacctggaaggtttatcgctacttcgcctacaattgctcccggctgttcccg
gccgtggctgtgcaggcatcaggccgcgtggaccaggtgctgtgcgagcagcgctactcc
gagatcgaaccctccagccatggtgaggtgattttcaaggtcctggacccgtccatccca
gtggaggatccatacagcccagccatccaggatctgctgcgtgtcaccaacctgcgggtg
aacctgaccaagctgcacacgctgggcgacaacctgctggactcgcggcgggagatccag
gagaaatattactatgccctctacgagctggtgctgcgcgggagctgcttctgctacggc
cacgcctccgagtgcgcgcccgtccccggcgcccaggccaacgtggagggcatgattcac
ggccgctgcgtttgcaggcaccacaccacaggcctgaactgcgagcggtgccaggacttc
taccaggaccggccctggcgccctgccgggggcaccgacccacccgcctgccaagggtgt
aactgtnaccagcactcacgccgtgcattcgacatggcgtgtaccgtggccacgggcaac
gccagcggcggaggcgtctgtgacgactgtcagcacaacacgatgnnccgcagctgccag
ctctgcaaacccttctatacacaggcccggcggccgacataccgggccagcagcgctgcg
gcagcctgtgactgtgacccggtgggctccctggatggtggagtgtgtgacagccacaca
gacgtggcactgggcatgatcgccgggcaatgccgctgcaaggaacacgtccagggcgtg
cgctgcgacagctgcaaggaggccttctatgggctaagccgcaccgacccacagggctgc
cagccctgcaggtgcgaccctcgtggcatcattgcgggcagccccccttgcgaccacatc
agtggagactgctactgcaagcgctttgtcagcggccggtactgcaaccagtgcctgccc
gagttctggggcctgagcaacgacatggccggctgccgctcctgtgcctgcgactttggg
ggcgcctacagcaacaggtgctccatggaggacgggttgtgcccctgccggccccacctc
atcgggcgccagtgtgaccaggtgcaacctggctacttctgtgcacccctggattactac
agctacgaggcggagcatgccacaggccacgcgcccagccactccatgctgccgggagca
ctgcgccccgaggcccccccggactgcctggagtattccagtgggcttccgaacgggcgg
aaggggcgtttgcgacgccagcacagtgccatgcagctcctgcagcaccgagccctgtcc
cggcgcggccggcagccgcagcacaagcccgacgtggaggtggtgtcccgggagcacgca
ggtcacatgatcacatggacagggcccggcttcgcccgcgtgcgggatggggccggcctg
tccttccatatcagcaacatcccctacgccatggagtacgacatcctgatccgctacgag
cccgagtccacagaggactgggaggccagcgtcagcgtcagtgcccaggcgttgcccacg
agccctcgctgcgcgaacgtgctgccctcagagcagaggtaccaggagaacctgccgcac
acccagaggtttccttttgtcccactgcggctgggctcccctccacccagctcggctatg
tccgcctggctcggctcacccccgcccccggccctgatgccatgtgggctgggcttgccg
cgcttccccccgcctcgtgccctgtcccgtggtaccctgcctgtcccggctttctgcttc
gcccaggacaccagtacgaggtcgccatcagctccagcgggcaatggaccgcgcccggct
gcacttcctcctctcgactccctcgttcttctgccgcgagtgctggagctgccggctttc
caaggccacaacccggcagcggtgcagcaccgcaaggagctggagcgctacctgtgccag
gaggcgttccgcatggcgaccatgccagcgctggccgagatgtgtgcccgcctgctctgc
agcatctcggccttgctgcacgatggggccctggcctgccagtgcgacccccaaggctct
accagcagcatgtgtcagccagtgggtgggcagtgcacgtgcaaaccccacgtgatcggc
cggcgctgtgaccagtgtgctccaggcacctatggctttgggccctccggctgcagtcgt
gagtacctgtgtaggcgggggaagcgaggtggtttctctctctctgctgtgggcaggtgc
ttggagggttactatggcgacccggtgctgggctccgggcagcagtgccggccctgcccc
tgccctgggtaccctgggactcggcattaccacggtaactcctgccacgccgaccaggag
accaatcagatcgtctgtgtgtgtgccccaggctacacaggcccacgctgtgaccactgc
tcccccggctacttcggggccccagagcaggagggcgggagctgccggccctgccagtgc
aacaacaacatcgacaccagcgaccccttggcctgcgacccccacagcgggcagtgcctg
cgctgcctgcaccacacagccgggccccgctgcgcggactgccagcccggctaccatggc
aatgccctgcaacgcagctgccgacgctgcacctgtaaccagctcggcacactgcccacc
cactgcacctctggcacctgctcctgcaaccagctcacgggcagctgcccctgccgtggc
cacgtggtgggcaggaactgcgatcagtgcgcccctggcttctggagcttcggtggggag
cagggctgcaagccctgcagctgccacccggcccactccctgcagcagagctgcaacatg
ttcacagggcagtgcccgtgccggccgggcttcgggggccgcatctgcgccgattgccag
gagaaccactggggcgagccagagcgggagtgccggacctgtgactgcgacccggccggg
gcggagagcctgcagtgtgagcgtctcagcgggcgctgtgcctgccggcctggcttcaca
gggcagcactgcgaccgctgcctccgcagcttccaggacaactttccccgctgcgaccgc
tgcccaccttgtttcgcccagtgggacctggccctggcccggctgcacaaccagctgcgc
cagctgcaggagcaggcgcaggcgctgcaggagggaggccctgggcctgagctcagcagc
agctgcctgcaggacctggagagcaagctgaggcgcacggagcagctggtcggggacagc
agcagccagggcgcccccctcctgcgccacctgggccgccagctggacgacaccagggag
gacatggacgaggtctggaagcagctgcaggctgcggaggggcgcctggacgggctggct
ggggcggacacggagcagaggggccgcctggccaacctgagcagggagctgcaggagcag
aaccgcaccctctcccaccagcaggagcagctggcaaactggaaagaggccagcttttgg
gagtcctactggagcatccagacctactctgagagctcgacgcaggcagcgcagcgggcc
agtgcctcggtgcaggggccagccagcccggtgggccaggcccagtgcacacggcaggcc
acagaggagctgctgcgcgacaccagcagcgccttccgcaggaccctggcagcgcagagg
agttcgctgcgggaggcccagaaacgggtggctgcactcagcatctccaggctcaacgag
aggatctgtggagtgaagggagatcaggactgccaacaagccccctgtggaggggcctct
tgccaggacgactctgggcagcggcgctgtgggggcccaggctgcaggggggcgctcccc
gtctccacacaggccctgcgcactgcccaggatgtctcacgccagctggaaagcgcggcc
gggcagctgggcaccatcgcccttaaggtgcaggagatccaggagctggcccgaggcgcc
aggagacgagcccaggacacactggatgggtcccaggcagccagaggccacatggaggag
tccacagccaggctgcgagaattcatccggaagatcaaggacttcctggcagaggaggga
gccgacccggagagcatcgagctggtggcccggcaggtgctgaacatctccctgcccagc
agccccagcaggatccggcacctgctgcagaagatccaggacagtatccggcagctggac
ggggtggacgctgtcctgaacagcacagcccatggcctggctgccgccaaggagctgctc
acacgggcagagcaggccagacaaaggcctgatccttccccggggcatccccacaccctg
aacccccttactggggctggggaacccctccctcctccgctggctggagccccccctccg
gtcccgccccagctgctcttccctggggcccggccgggccgggggctcgcgtggactctc
aatcgcgaggcggagcgcaggctccgggggctgcaggagaaggaggcgcaggtgctgcgg
cccctgcaggcgctggcgaagcaggtggctgccctgcaggacaaggccagggccaaccgg
ggcctggccaaggaggccaaggagaaagcggagcgagccgtgtcggccacgggggagctg
gaccaggcttctgcgctggacactgccccagtgcccaaaggaaccatggccctaagctga
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integrated database retrieval system
