Chelonoidis abingdonii (Abingdon island giant tortoise): 116820411
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Entry
116820411 CDS
T07367
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor isoform X1
KO
K20286
TATA element modulatory factor
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116820411 (TMF1)
Membrane trafficking [BR:
cabi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
116820411 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
SlyX
Motif
Other DBs
NCBI-GeneID:
116820411
NCBI-ProteinID:
XP_032628749
Ensembl:
ENSCABG00000002492
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQAEESPWAEAVTPEHGDGTNSLSSGGWDTS
TWGLNSNIEPQSQPISSPAAITKPVRRTVVDESENFFSAFLSPPDIQSLQQNPVVSKPPT
KSQRPKEGVKSTLKESLCSSHPETLVETETEAKDSSASVQVDLKNLAVPQEKLEESSVLE
TDAKHEENTNKGTIDKVATPELKVPEVVVDVKSNAGNDGSGSAPDSPAQSLTAETKDMGL
ESKEQKNEDRQSNTPSPPVSTFSSGTSTTSDIEVLDHESVISESSVSSRQEATDSKSSLH
LMQTSFQLLSTSACAEYNRLDDFQKLTESCSSSDAFERIDSFSVQSLDSRSVSEINSDDE
LSGRGCASASLTISSLTPKTEMVDLMKNKELNETLVHAEETEMEESGRSATPVNSEQPDV
LVAAVQTDEGQMAKEDVVMQQQGAEKLPKVNCEKEELCKMIDLLTEKLEKRETQLLSVSK
EKASLEEAYDNLKDEMFRVKEESSSISSLKEEFTQRIADAEKKVQLACKERDAAKKEVKN
VKEELAIRLNCNETAELLKEKDEQIKGLMQEGEKLSKQQLHNSNIIKKLRMKEKENENTN
TKQSKKIKELEEELQHLKQVLDGKEEIEKQHRENIKQLNSVVERQEKDLSRLQIDVEELE
ERNRSVQAALDSAYKELADLHKANATKDSEAQEAALSREMKAKEELGLALEKAQDEARQQ
QEALAIQVADLRLALQRAEQQAARKEDYLRQEISELQQRLQEAENRNQELSQSVTSATRP
LLRQIENLQATLGAQTSSWEKLEKNLSDRLGESQALLAAAAERERAATEELLSNKIQVSS
TESQNSLLRQENSRLQAQLEAESARLKKLENENNRYEVELENLKEEYVKTLDEAKKEKTL
LATQLEMEKMKVEQEKKKAIFVQETAKEKLLYFSKERKSFTSSAMETVSSTPTLSRSSSI
SGVDMAGLQPSFLSQDDPHDHSFGSMSTSGSNLYDAVRMGAGSSIIENLQSQLKLKEGEI
SHLQLEIGNLERTRSIMAEELVKLTNQNDEFEEKVKEIPKLRAQLRDLDQRYNTILQMYG
EKAEEAEELRLDLEDVKNMYKTQIDELLKQRHN
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcctcccagctctcgagcttcgccaagcaggcgctgtcgcaggcc
cagaaatccatcgacagggtgctggacatccaggccgaggagagcccctgggccgaggcc
gtcacccccgagcacggcgacggaacaaattccctttcaagtggcggatgggatacttct
acttggggattaaactcaaatatagagcctcaaagtcagccaatatcctcaccagcagca
atcaccaaaccagttaggaggacagtggtggatgaatctgagaatttcttcagtgccttt
ctctctccaccagatattcagagtctacagcagaatccagtggtgtctaaacctccaacc
aaatcacaacgacccaaagaaggagtgaaaagcactttaaaggaatctctttgcagcagt
catccagaaacgctagtagaaactgagacagaagcaaaagattcttctgcatctgtgcaa
gtggacttgaaaaaccttgctgttccccaggaaaaactagaagaaagttctgtacttgaa
actgatgctaaacatgaagagaatacaaacaaaggcactattgataaggtggccactcca
gaactcaaagtacctgaagttgttgttgatgtgaaatctaatgcaggaaatgatggatca
ggaagtgctcctgacagccctgcacaatctcttactgcagagacaaaggacatgggtttg
gaaagtaaggaacaaaaaaatgaggacagacaaagcaacacaccttcacctcctgttagc
actttctcctcggggacgtccacaactagtgatattgaagttttggaccatgaaagtgta
ataagtgagagctcggtaagttcaagacaagaggctacagattcaaaatccagtcttcat
ctgatgcaaacttcctttcagctcttatcaacatctgcctgtgctgagtataatcgctta
gatgactttcagaaactgactgagagttgcagctcctctgatgcttttgaaagaatagat
tcgtttagtgtgcagtcgttagacagccgaagtgtaagtgaaatcaattcagatgatgaa
ttatcaggcagaggttgtgcgtcagcatctctcacaatcagctctttaacaccgaagact
gagatggttgacctcatgaaaaataaagaattgaatgagacacttgtacacgcagaggaa
actgaaatggaggaaagtgggagaagtgcgacccctgttaactctgagcaaccagatgtt
ttggttgctgctgtacaaacagatgaaggacaaatggctaaagaggatgtggtaatgcag
cagcaaggtgctgaaaagttgccaaaagtgaattgtgaaaaggaagagctttgcaagatg
attgatttgttgactgagaagctggagaagagggaaacacagttattaagtgttagtaaa
gagaaggcaagcctggaagaagcttacgataacctgaaagatgaaatgtttagagtgaaa
gaagagagcagtagcatttcatctcttaaagaggagtttactcagcgaatagcagatgct
gaaaagaaggtccagctagcatgcaaagagagggatgcagctaaaaaggaagtaaagaat
gttaaagaagaattggcaattagactaaattgtaatgaaacagctgaactattgaaggag
aaggatgaacaaatcaaaggactaatgcaagaaggagaaaagctttcaaaacagcagtta
cacaattccaacatcattaagaagttaagaatgaaagagaaggaaaatgaaaatactaat
acaaaacagagcaaaaagattaaggagttagaagaggagttgcagcatttaaaacaggtg
cttgatggcaaggaggagattgaaaagcagcatcgagagaacattaaacaactgaacagt
gtggtagagcgacaagaaaaagatctcagcagacttcagattgacgtggaagagcttgaa
gaacggaaccgaagtgttcaagcagcacttgatagcgcatacaaggaacttgctgatctt
cacaaagctaatgctacaaaggatagtgaagcacaagaagcagcattaagtcgtgaaatg
aaagctaaggaagaacttggattagctctggagaaggcccaagacgaagcccgccagcag
caagaagctttagcaattcaggtggcagacctgaggctggcactacaacgagccgagcag
caagcagcgagaaaggaggactatttgcgccaagaaatcagtgaactacaacagagactc
caagaagcagagaatcggaaccaagaactgagtcaaagtgttacatctgccaccaggcca
cttcttcggcagatcgaaaatctacaagcaacactgggagcacaaacctcctcatgggaa
aagttagagaagaacctttctgacagacttggtgaatctcaagccctcctggcagcagca
gctgagagagaacgtgctgctacagaagaacttctttccaataaaatccaagtgtcttcc
actgaatcacagaatagcctcttgaggcaggaaaacagtcgccttcaggctcagctggaa
gcagagagcgccagactcaagaaactggaaaatgaaaacaataggtatgaggttgaatta
gaaaacctgaaagaggagtatgtgaaaactcttgatgaagcaaaaaaagaaaagacgctg
ttagctactcagttagaaatggagaaaatgaaagttgaacaagaaaagaagaaagcaatt
tttgtacaagaaacagcaaaggaaaagctgttgtatttttcaaaggagcgtaagtcattt
acctcatcagcaatggaaactgtttcgagtactccaacactgtcacgctcaagctctata
agtggagttgatatggcagggcttcagccatccttcctctcccaggatgatcctcatgat
cattcatttgggtcaatgtctacaagtgggagcaatctttatgatgctgtaaggatggga
gcagggtcaagtataattgaaaacctgcagtcgcagttaaaactgaaggaaggagagatt
tctcacctacagctggaaattggaaaccttgaaagaactcgatcaataatggcagaagag
ctggttaaattaacaaatcaaaatgatgaatttgaagaaaaggtgaaggagataccaaaa
ctacgtgcacagctaagggatttggatcaaagatacaatactattcttcagatgtatgga
gagaaagcagaagaggccgaagagcttcggctggatcttgaagatgtgaaaaatatgtac
aagactcaaatagatgaacttttaaaacaaagacacaactaa
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integrated database retrieval system
