Chelonoidis abingdonii (Abingdon island giant tortoise): 116820644
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Entry
116820644 CDS
T07367
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi02010
ABC transporters
cabi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116820644 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116820644 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cabi02000
]
116820644 (ABCA1)
Transporters [BR:
cabi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116820644 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
116820644
NCBI-ProteinID:
XP_032629167
Ensembl:
ENSCABG00000011699
LinkDB
All DBs
Position
Unknown
AA seq
2271 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGESPGVVGNFNRSIISRLFSDAKRLLLYSQQDS
SLKDAQKLLGKLQKLGNSGSGLKLRDFLVDNETFSDFLRHNISMPSFAADEILNAEVNLK
RVILSGYRMELRNLCNVSELSEFVTIHNPVVAVVSKAFLCTMPKEKLYAAEQAFRANIDL
LKPVLKGITSNSSLHDLSGVMETLVESLGKLVKELVSMKSWSDMRQEVMFLTNVNSTSSS
TQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEEDAANFYDNSTTPYCNE
LLKSLESSPLSRIIWRALKPLLIGKILYTPDTPVTRRVMTEVNRTFQELGVFQDLGGMWE
EISPKIWTFMESSQEMDLIRTLLKSKGLWDTHLSGSTWRVQDVSLFLAKSPEDIQPVNGS
TYTWMDAFNETDRAVQTISRFMECVNLDKLEPVATEVQLINRSMELLEERKFWAGIVFPE
ITSNSVELPPHIKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDVV
EQAIIRALTGTEKKTGVYVQQMPYPCYVDDIFLRVMGRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFLSSLIPLLMSAGLLVLILKMGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTMFSRANLATACGGIIYFILYLPYVLCVAWQDYVSVSLKMFAS
LLSPVAFGFGCEYFALFEEQGVGVQWDNLFESPLEEDGFNLTTSAFMMLFDTFLYGVMTW
YIESVFPGQYGIPRPWYFPFTKSYWFGEEYEERRHARSDHKGPSENCMEEEPNHLSLGVS
IQNLVKIYRDGKKVAVDGLTLNFFEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFIL
GKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLSEKKVEEEMQQMVMDVG
LPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQG
RTIILSTHHMDEADILGDRIAIISNGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSS
CRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTVDVSVISNLIMKHVPEARLVEEIG
HELTYVLPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEDNGVDAET
SDGTLPARRNRRVFGDRQSCLHPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQMK
GWKLIQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQ
PWMYDEQYTFISNDAPDDAGTQKLMNTLLNEPGFGTRCVEGHSIPDTPCLVREVEWTTSS
VPDTVLDIFLNGNWTLENPSPACECSNEKIKKMLPVCPPGAGGLPPPQREQNTGDILQNL
TGRNISDYLVKTYAQIIGKSLRNKIWVNEFRYGGFSVGASSSLLLPPSDEVSDAIKQVKK
ILEVAKGSSGDQFLHSLGSFMKGMDTKNNVKVWFNNKGWHAIGSFLNVINNAILRANLQD
GKNPSTYGITAFNHPLNLTKQQISEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPALAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
EILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
AVFFLITVLIQYRFFIKPRPVSAKLPSVNDEDEDVTRERQRIISGGGQSDILEIKELTKI
YRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAYLKGNSILSN
IQRVHQNMGYCPQFDAINELLTGREHLEFFALLRGVPEKEVCQVGEWAIRKLGLMKYGEK
YAGNYSGGNRRKLSTAIALIGSPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPNLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHTKDMSLHKNQTLVDIAILTSFLQDEREQSCYKYWAQSCICNS
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacacagttgggattgctgctatggaagaacttcacgtacaggagaagg
cagacatttcagctgctgattgaagttgcttggcctctctttatcttcttcatattgatc
tccgtacgcctttcatatccaccctatgaacaacatgagtgtcactttccaaacaaggca
atgccttcagcgggaaccttgccctgggtccaagggattatctgtaatgccaacaaccct
tgcttccgctacccaacacccggggaatccccaggtgtcgtcggaaacttcaacaggtct
atcatttcccgcttgttctctgatgccaagaggttacttttgtacagccagcaggacagc
agcttaaaggatgctcagaaactcctgggaaaactgcagaagcttgggaactctggctca
ggtttgaaacttcgggatttcctggtcgacaacgagaccttctcagactttctccgtcat
aacatttccatgccatcgtttgctgcggacgagatactgaatgcggaggtcaacctcaag
cgggtcatcctgtctggctacagaatggagctgagaaatctgtgcaatgtgtcagagctg
tctgaattcgttacaattcacaacccagtagtcgcggtggtcagcaaagctttcctttgt
accatgcctaaggaaaaactctacgcagcagagcaagcctttcgtgctaatatagacctt
ttgaagcctgtactgaaaggaatcacgtccaattcctccttacatgatctgtcaggagtc
atggagaccttggtggagagtcttgggaagctcgttaaagagctggtgagcatgaagagc
tggagtgacatgaggcaggaggtgatgtttctgaccaatgtgaactccacaagctcctct
actcagatctaccaggcggtgtcacggattgtgtgtggccatccggaggggggagggttg
aaaatcaaatctctcaactggtatgaggacaacaactacaaagccctgtttggaggcaac
agcactgaggaggatgcagctaatttctatgataattctacaacaccctactgcaatgag
ctgctgaagagtcttgagtccagtccgctttcccgaattatttggagggctctgaagcct
ttgctcattgggaagatcctgtacactcctgacaccccagtcacgaggagggtcatgact
gaggtgaacaggactttccaggagctgggcgtgttccaggacctaggagggatgtgggag
gagataagcccgaagatttggacgttcatggaaagcagccaggaaatggatctgattcgg
acactgctgaaaagcaaaggcctctgggacactcacttgagcggctcaacgtggagggtt
caagatgtttccttgttcttggcaaagtccccagaggacattcagccagtgaatggctcc
acatacacttggatggatgccttcaatgagactgaccgggctgtccaaaccatctcccgc
ttcatggagtgtgtcaacctggacaagctggagcctgtggccacagaagtgcagctcata
aacaggtccatggagctcctggaggagaggaagttctgggctggcattgtcttccctgaa
atcacctcaaacagtgtagagctgcctcctcacatcaagtacaagatacggatggacata
gacaatgtggaaaggacaaacaagattaaggatgggtactgggatcccggtcctcgtgcc
gacccctttgaagacatgcggtatgtctggggcggctttgtgtacttgcaggatgttgtg
gagcaggcgatcatcagggcactgacaggcacagagaagaagactggtgtctatgtgcag
cagatgccctatccctgttatgtggatgatatattcctgcgtgtcatgggccgttccatg
cccctcttcatgactctggcttggatctactcggtggccgtaataatcaaggggattgtg
tacgagaaggaagcccggctgaaggagacgatgagaatcatgggcctggacaatggtatc
ctttggttcagctggttcctcagcagcctcatccccctcctcatgagtgctgggctgctg
gtgctgatcctgaagatgggaaacctgctgccctatagcgaccccagcgtggtgtttgta
ttcctctccgtcttcgccgtggtgaccatcttgcagtgcttcctcatcagcaccatgttc
tccagggccaacttggcaacagcctgtgggggaatcatctatttcatcctgtaccttccc
tacgtgctgtgcgtcgcctggcaggactatgtgagcgtctcgctgaaaatgttcgcgagc
ctgctgtccccggtcgcctttgggtttggctgtgagtactttgcattgtttgaggagcag
ggggttggcgtgcagtgggacaacctctttgaaagccccctggaagaagatggcttcaac
ctcaccacatctgctttcatgatgttgtttgataccttcctctacggggttatgacctgg
tacattgagtctgtcttcccaggccagtacggaattcccaggccttggtacttccccttc
acaaagtcctattggtttggtgaggaatatgaggagaggcggcatgctcgttctgatcac
aaagggccatcggagaactgcatggaggaggaacccaatcatcttagcctgggggtctcc
attcagaacctggtgaagatttatcgtgatggcaagaaggttgctgtggatgggctcaca
ctgaatttctttgaagggcagatcacatcctttctgggacacaacggagctgggaaaacc
acaaccatgtccatcttaactggcttatttcctccgacctcgggcacagccttcatcctg
ggcaaagatatccgctctgagctcagcaccatcaggcagaacttgggtgtctgtccccag
cacaatgtcctctttgacttgctgactgtggaagagcacatctggttctacgctcgtctg
aaagggttgtcagaaaaaaaggtggaagaagagatgcagcagatggtgatggatgtcggc
ctgcctcacaaactcaaagctagaaccagcaaactctctggtggcatgcagagaaagctg
tctgtagccttggcctttgtgggtggatcaaaggttgtcattttggacgaaccaacagct
ggagtggatccctactctcgccgagggatatgggagctgcttctgaagtatcgccaaggc
cgcaccatcattctgtccacacaccacatggatgaggcagacatcctaggggacaggatt
gccatcatttccaatggcaaactgtgttgcgttggctcttccctgtttctgaagaaccag
ctaggaacaggctattacctgaccctggtcaagaaggacgtggactcttctctgagctcc
tgcagaaacagcagcagtacggtgtcatacctgaaaaaggatgacagtgtctcccagagc
agctcagatgctgggcttggcagtgaccatgaaagtgacaccttgacagtagatgtttct
gttatctccaacctcattatgaagcacgttcctgaggccaggctggtagaggagattggc
catgagttaacctacgtcttgccatatgaagctgctagagagggagcttttgtggagctg
ttccatgagatcgacgaccgtctctctgacctgggcatttcaagttacggcatctcagag
actaccctggaggaaatctttctcaaagtggctgaagataatggagtggatgcagagacc
tcagatggcacattacctgcaagaaggaacaggcgtgtctttggagacaggcagagctgc
cttcatccattcacggaagatgatgctttcgaccctaatgattcagatatagatccagca
gaatccagagagacagacctgctcagtgggatggatggcaaagggtcctaccagatgaag
ggctggaagctcatccagcagcagttcgtagctctgctgtggaagcggctgctcattgcc
aggcgcagcaggaagggtttcttcgcccagatcgtactgcctgccgtgtttgtgtgcatt
gctctcatgttcagcctgattgtacctccctttgggaaataccccagcctggaactgcag
ccctggatgtacgatgagcagtatacctttatcagcaatgatgcgccagacgatgcaggc
actcagaagcttatgaacactcttctcaatgaacccggctttgggacccgctgtgtggaa
ggacattccattccagacactccttgcctggtcagagaggttgaatggaccacctcctct
gtccccgacacggtcctggacatcttcctgaatggcaactggaccctggagaacccctcc
ccagcctgcgaatgcagcaatgagaagatcaagaaaatgctccctgtgtgccctcctggc
gcaggggggctgcctcctccacagagagaacagaacactggtgacatcctgcagaacctg
acgggccggaacatatcggactatctggtgaagacctacgcacagatcattgggaaaagt
ttaaggaacaagatctgggtgaatgagttcaggtatggtgggttttcagtgggtgccagc
agttccctcctgcttcctcccagtgatgaagtcagtgatgccatcaagcaagtgaagaaa
atcttagaggtagccaaggggagttctggagatcagtttcttcacagcttaggaagcttc
atgaaagggatggacacaaaaaacaatgtgaaggtttggttcaataacaaaggctggcat
gccattggctccttcctaaatgtgatcaacaatgccatcctccgggccaaccttcaggac
ggcaagaatcccagcacctacgggatcaccgcattcaaccacccgctcaacctcaccaag
cagcagatctccgaggtcgccctgatgaccacatcggtggacgttttagtctccatctgc
gtgatcttcgccatgtccttcgtcccagccagctttgtggttttcttgatccaggagcgg
gtcagcaaggccaagcacctgcagttcatcagtggagtgaaaccggtgatctactggctg
gctaacttcgtctgggatatgtgcaactacatagttccagctaccttggtcatcatcatc
ttcatctgcttccaacagaagtcctacgtgtcctcttccaacctgcccgcgctggccctt
ctcctcctgctctatgggtggtctataacaccactcatgtacccagcttcctttgtgttc
aagatccccagcacagcctacgtggtgctgaccagtgtgaatctcttcattggcataaat
ggcagcgtggccactttcgtcctcgagctcttcaccaacaacaagttgaacaacatcaat
gaaatcctgaagtctgtgtttctcatcttcccccacttctgcctggggcggggactgatc
gatatggtgaaaaatcaggccatggctgatgctttggaaaggtttggtgagaaccgtttt
gtgtcccctctgtcctgggatctggtgggacggaacctctttgccatggctgtggaaggg
gcagtcttcttccttatcacagtgctcatccagtacaggttcttcatcaaaccgaggcct
gtcagtgccaagttgccttctgtgaatgatgaggatgaggatgtgacgagggagaggcag
aggataattagtggtggtggacagagtgacatccttgaaatcaaggagctgaccaagatt
tatagaatgaagaggaaaccagctgttgatcggatctgtgttggaatccctcctggggag
tgctttggcctcctgggagtgaatggcgctggcaagtcatcaactttcaagatgctaact
ggagatacagatgtgacgggaggagaagcttatctgaagggaaacagtatcttgtctaat
atccaaagagtccatcagaacatgggctattgccctcagtttgatgctattaatgagctg
ctgacagggagagaacatctggagttctttgcacttttacgaggtgttcctgagaaagag
gtctgccaggttggcgaatgggcaattcgtaaactgggccttatgaaatatggagaaaaa
tatgctgggaactacagtggcggcaacagacgcaagctctccactgctattgccctgatt
gggagccctccagtggtgttcctggatgagccaaccacgggaatggatcccaaggcacgc
cgtttcttatggaactgtgccctgagcatcatcaaggaggggagatcagtggtgcttaca
tctcacagcatggaagaatgtgaagccctgtgcactcgaatggcaataatggtcaacggg
cggttcaggtgtcttggcagcgtccagcatctgaagaacaggtttggagatggttataca
atagtagtgcgaatagctggggcaaaccctaacctgaagcctgttcaggaattctttggg
cttgcctttcctggcagcgtcctgaaggagaagcatcggaacatgcttcagtaccagctc
ccatcctcgccatcctctctggctaggatatttagtatcctctcccagaacaaaaaaaga
ctccacatagaagactactccgtttctcagactacacttgaccaagtatttgtaaacttt
gccaaggaccaaagtgatgatgaccacacaaaggacatgtcattgcacaaaaaccagact
cttgtggacattgcaatccttacttcctttctgcaagatgagagggagcagagctgttat
aaatattgggcccaatcctgcatctgtaactcatga
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integrated database retrieval system
