Chelonoidis abingdonii (Abingdon island giant tortoise): 116820756
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Entry
116820756 CDS
T07367
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04620
Toll-like receptor signaling pathway
cabi04621
NOD-like receptor signaling pathway
cabi04622
RIG-I-like receptor signaling pathway
cabi04623
Cytosolic DNA-sensing pathway
cabi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116820756 (IRF7)
04621 NOD-like receptor signaling pathway
116820756 (IRF7)
04622 RIG-I-like receptor signaling pathway
116820756 (IRF7)
04623 Cytosolic DNA-sensing pathway
116820756 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116820756 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116820756 (IRF7)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116820756 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Hormone_6
Motif
Other DBs
NCBI-GeneID:
116820756
NCBI-ProteinID:
XP_032629336
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MAASESEGGSQKLRFACWLIKQINSKNYEGLRWVDKDHTQFRIPWKHTSRKDINPNDYKI
FKAWAITSGKYNEKLKDLAKWKTNFRCALRSTNMFLMVQDNSKTSEDPHKVYKIISPSPD
AVTAANALTTKNNNLHDSKEDIHPHSEEAPNLHHRMPEQLQPQIELDLEMLSLENPPQEM
DSGQNERPAYDPGRNPPQGYTTNNSASNGYQCSPDTLQWILQQCNLTQNDCSPQQLPWAL
DGGLDHRSEEVPYEDSPGYPNQHIGQNSYPQQGSGVANGPMENYHQSVGQWVTQTMAETQ
TLQNAYGPSAASLLQQPLPSSTVPGMSQLLNNAAEVLFEGRPHYNNHAGIQSTFLSEAPT
GNAVIYPTLNDPGENSYHQPANQWAAPAVLEQNRFTQPAAPLPEQQHPPNTAPSQNNTET
IPHNMDVTIYYRGKSLHEVQVATSSCLFTYNNEDLTMVPGCAQVVYFPSPDELPDRKQVQ
FTRQLLLSAGLLLEQKHKKIYAKRLNKCKVFWALSRQLANMAQNPESKLLPRGTEMEIFD
YEVFSKELKDFKEHQRAASPDFTIYLCFGQCFSKSKPKESMLILVKLVPKFCEYFHDMVL
REGASSLNSGNVSLQLSSCFNSLFDLIEQYSMQIN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggctgcatccgagagcgaagggggttctcaaaaattacggtttgcctgctggctgatt
aaacagatcaacagcaaaaactacgaggggctccgctgggtagacaaggaccacactcag
tttcgcatcccctggaaacacacttccaggaaggatatcaaccctaacgactacaagatt
ttcaaggcctgggccataaccagcggcaagtacaatgaaaagctgaaagatctagccaag
tggaaaaccaacttccgctgtgctctgagaagcacaaatatgttcctgatggtgcaggat
aactcaaagacctctgaggaccctcacaaagtgtataaaatcatcagcccaagccctgat
gctgtgacagctgctaatgccctgactactaaaaacaataacctgcatgacagtaaagaa
gacatccacccccattctgaagaagcccctaatctgcaccaccgtatgccagagcaactg
cagccgcagatagaattagatttggagatgttgtcactggaaaaccctccccaagagatg
gatagcgggcagaacgaaaggccagcctatgaccctggcaggaatccaccccagggctac
accaccaataattcagcatcaaacggctaccagtgcagtcccgacacactccagtggatt
ctgcaacagtgcaacttaacccagaatgactgcagcccgcagcagctgccgtgggctctg
gatggaggtttagatcaccgttcagaggaagtgccatatgaagacagcccaggctatcca
aaccaacatattggccaaaatagctacccacagcaggggagcggagtggcaaatggacca
atggagaactatcaccaatcagttggccagtgggtgacccaaactatggcagagacccaa
accttgcaaaatgcttatggcccttctgctgcctcacttctacagcagccactcccatcc
agcacagttcctggcatgagtcagcttcttaataatgcagcggaagtcctgtttgagggg
agacctcactacaataaccacgcgggcattcaaagcactttcctgagtgaagcacctaca
ggaaacgcagtgatctatccaacgctgaatgacccgggagagaacagttatcaccagccg
gccaatcagtgggcagccccagcagtgctggagcagaacaggttcacccagcctgctgcc
cctctcccagagcagcagcatcctcccaacacagcaccatcacagaacaatacagaaact
attcctcacaatatggacgtcaccatctattaccgagggaagtcactccacgaggtgcag
gtggccaccagcagctgcctgttcacgtacaataacgaagaccttaccatggtaccaggc
tgcgcgcaggtggtctatttcccaagcccagatgagctgcctgaccgaaagcaggtccag
ttcaccaggcagctgctcctgagcgcagggctgctgctggagcagaagcacaagaagatc
tatgccaagcgcctgaataaatgcaaggtcttctgggccctctccaggcaattggcgaac
atggctcagaaccctgagtccaagctgctgccacgtggcacagagatggagatcttcgac
tatgaggtgttctcaaaggagctgaaagattttaaggaacatcaaagggctgcatctccc
gacttcaccatctacctttgctttgggcagtgcttctccaaatccaagcccaaggagtcc
atgttaatcctggtgaagctggtgcctaagttctgtgagtatttccatgacatggtgctg
cgggagggagcctcgtccctgaacagcgggaatgtgagcctccagctgtccagctgcttc
aacagcttgtttgacctcattgagcagtacagcatgcagattaactga
DBGET
integrated database retrieval system
