Chelonoidis abingdonii (Abingdon island giant tortoise): 116820774
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Entry
116820774 CDS
T07367
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116820774 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cabi01009
]
116820774 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116820774 (PCDH9)
Protein phosphatases and associated proteins [BR:
cabi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116820774 (PCDH9)
Cell adhesion molecules [BR:
cabi04515
]
Cadherins
Protocadherins
116820774 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
MAP17
V_ATPase_I
RCR
EphA2_TM
DUF6249
7tm_3
DUF6377
Big_9
Motif
Other DBs
NCBI-GeneID:
116820774
NCBI-ProteinID:
XP_032629347
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHISAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADVGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAIDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPALTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFH
LPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSD
GPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGPYQQPKSPLSTFAPQKEWVKKDKLV
NGHTLTRTWKEDSNRNQFSDRKQYGSGEGHFNTGNHMTDIPLANLKSYKQASGPAESPKE
HQL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattca
gctatagctcaagaacttatttacactattagagaggagctacctgaaaatgtacccata
ggaaacataccaaaggatctgaacatttctcacatcagtgctgccacagggaccagcgcc
agcctcgtctacagactggtttctaaagcaggggatgcccctttggtcaaagtgtccagc
accactggggaaatcttcaccacctctaatagaatagacagagaaaaactctgtgctgga
gcctcctatgctgaagaaaatgagtgtttttttgaacttgaagtggttattctccccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaagataccaatgacaatgcacct
atgtttccatctcctgtcatcaatatttccatacctgaaaacacgttgatcaatagccgc
tttccaattccatcagcaactgatcctgacacaggtttcaacggtgtacagcactatgaa
ttgttaaatgggcagagtgtctttggactggatattgttgaaactccggaaggagagaaa
tggcctcaactgatcgtacagcaaaacttggatagagagcagaaagacacctatgtgatg
aaaatcaaagtagaggatggaggaacccctcagaaatccagcacagccatactgcaagtc
acagtaagtgatgtcaatgataacagaccagtttttaaagagagtcaggtggaggttcac
ataccagagaatgccccagtaggcacctctgtaattcagcttcatgctacagatgcagat
gtaggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctgcaaccaaa
aggctgtttgctttaaataacacaacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggccagtgatggtagctctactcctgct
cgggcaactgttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcccatcaatggcacagtatacttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtcccatttcacttgaaggcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtg
gcctctgattctggcaagcccagtttgaaccagactgcactggtaagagttaaactggag
gatgaaaatgacaaccctccaattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcttcctttttcgatctggatcgaaag
acgggagttttaacagcctccagagtttttgacagagaagagcaagaacgtttcattttc
actgtaacagcaagggacaatggcacccctcctctgcagagtcaagcagctgtaattgtt
actgtgctggatgaaaatgataacagtcccaaatttactcataatcactttcagtttttt
gtatctgagaacttaccaaagtatagcaccgtgggagtgatcacagtgacagatgcagat
gcaggggaaaataaagcagtgaccctttccatcctgaatgataatgagaactttgtgctg
gatccttactctggagttataaagtccaatgtttcttttgatcgagaacagcagagctcg
tacacctttgatgtcaaggccattgatggaggacaacctcctcgctcttctacagcgaaa
gtaacaataaatgtcatggatgttaatgataacagcccagttgtcatctatccaccttct
aatacttcttttaaattggtgccactctcagcaatcccaggctctgtcgtagcagaagta
tttgctgtggatatagacactggaatgaatgctgaacttaaatatacaattgtaagtgga
aataacaaaggtttatttcgtattgatccagtgacaggtaatattactctagaagaaaaa
ccagctcttactgatgtggggctgcatcgtttagtggtcaacataagtgacttgggttat
cctaaatccttgcatactcttgtgcttgtatttttgtatgtaaatgacactgctggaaat
gcctcttatatttatgacttgatacgtaggactatggaaacacccttggaccggaacata
ggggacagtagccaaccctatcaaaatgaggactatcttactatcatgattgctatagtg
gcaggtgctatggttgtgatcgtggtgatatttgtcacggttctggttcgctgtcgacat
gcatctaggttcaaagcggcacaaaggagcaagcaaggtgctgaatggatgtctcccaat
caggagaacaaacagaacaagaaaaagaaaaggaagaaaaggaagtctcctaaaagttct
cttttaaactttgttaccattgaggagtcgaaacctgatgatgctgtccatgaacctatc
aacggaacaataagccttccagctgagctggaggagcaaagtataggaagatttgactgg
ggcacagcaccaccaacaacctttaagccaaacagtcctgatcttgctaagcattacaaa
tctgcctctccacagtctgcttttcatcttaaacctgacactccagtatcagtgaaaaag
catcatgtgattcaggaacttccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtcccagcgccgtgttacgtttcac
ctccctgatggctcccaggaaagctgcagtgacagtggtctaggagaccatgagcctgtg
ggtagtggaaccctgatctcacaccctctccctctggttcagccacaggacgaattctac
gaccaggcctcaccggacaagaggactgaagctgatggcaactctgaccccaactctgat
gggcctcttggtccacgaggattagctgaagctacagagatgtgtactcaagaatgcctg
gttttgggtcactcagataactgttggatgcctcccagcctgggtccataccagcagcca
aagtctcctctctccacctttgcacctcagaaagaatgggttaagaaggacaaactagtg
aatggacacacgttgacaagaacctggaaagaagatagcaacagaaaccagttcagtgac
cgaaagcagtatggttctggtgagggccatttcaacactggcaatcacatgactgacatt
cctttggctaacttgaagtcttataaacaggcctcaggacctgctgagagtccaaaggag
caccagctataa
DBGET
integrated database retrieval system
