Chelonoidis abingdonii (Abingdon island giant tortoise): 116820903
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Entry
116820903 CDS
T07367
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116820903
Membrane trafficking [BR:
cabi04131
]
Protein recycling
Others
Others
116820903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
116820903
NCBI-ProteinID:
XP_032629560
Ensembl:
ENSCABG00000018810
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
CVSPSLSPAAAAMGKVAGRSPAGWRVALLAGTWLVQLLCTFGTSGAEITCRVCLAPGKPP
RPQRGLFFVPGGPGRGEEARRFPAAGGKVTSPAAPSQEKPTGQPEPSASPARSAGPGLPR
APPRGTAPRGGRLSRSPAERRRARGVPAELGQQGREAAGAPPEQPQGKATRFRLEELKLS
SSTFALTGDSAHNQAMVHWSGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYEKLN
DKVGLKTLLSYLYVCPTNKRKIMLLTDPEIESSLLISSDEGATYQKYRLNFYIQSLLFHP
KQEDWILAYSLDQKLYSSIEFGRRWQLLQEGVTPNRFYWSVMGSSKEPDLVHLETKTVDG
HAQYIICRMQNCTEATRSKPFPGYIDPDSLIVQDDYVFVQLTSGGRPHYYVSYRRSAFAQ
MKLPKYSLPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSSRGL
EGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWRLLQAPDTDLRGNPVHCLLP
YCSLHLHLKVSENPYTSGNIASRDTAPSIIVASGNIGTKLSDNDISMFVSSDAGNTWRQI
FEEEHSVLYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPGE
ETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYRKR
KSEKKCMQGKYAGAMASEPCVCTEADFDCDYGYERHTNGQCLPAFWYNPSSLSKDCSFGQ
SYLNSTGYRKVVSNNCTDGVREQYTAKPQQCPGKAPHGLRIITLDGKLTAEQGHNVTFIV
QLEEGDVQRMIIQVDFGDGIAVSYANLSSTEDGIKHVYQNVGIFRVTVQVENSLGLDSAV
LYLHVTCPLEHVHLSLPFVTTKNKEVNATAILWPSQVGTLTYVWWFGNNTEPLVTLEGSI
TFTFSVEGMNTITVQVSAGNTILQDTKTIAVYERFQSLRLSFSPNLDEYNPDIPEWRRDV
SRVIKRALVEATSISSKHILVAVLPGLPTSAELFILPCQEAMGENKRPPEDLDQISEILI
HKLNQNLVQFELKPGVRVLVHVAHLSAVPLVDLTPSHSGSAMLMLLSVVFVGLAVFVIYK
FKRKIPGINVYAQMQNEKDQEMVSPVSQRESMPNIPQSELMSPEQLVDEKLDTRPIGSIS
IAAETQSTKEIPTYVNV
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
tgtgtctctcccagcctctcgcccgcagccgcagccatgggaaaagttgcgggccggtcc
ccggcgggctggcgcgttgctctgctggccgggacctggcttgtccagctcctctgcacc
tttggcaccagcggggccgagataacgtgccgcgtctgcctggccccggggaagccgcct
cggccgcagcggggattattcttcgtgcccggggggccgggccgcggggaagaggcgagg
cggttcccggcggccggggggaaagtgacctcccccgctgctcccagccaggagaaaccc
accggccagcccgagcccagcgcatccccggcgcgctccgctggccccggcctgccccga
gctcccccccgggggactgcgccccgcggcggccggctgagcaggagcccggcggagcgg
aggagagccaggggggtcccggcggagctgggccagcagggcagggaggcggcaggggca
ccccccgagcagccgcagggcaaagccacccgcttcaggctggaggagctgaagctgagc
agcagcaccttcgcgctgaccggggactcggctcacaaccaagccatggtgcactggtcg
ggccacaacagcagcgtgattctaattctgacaaagctgtatgactacaacctggggagc
atcaccgagagctcgctttggaggtcaacagattacgggacaacatatgagaaactgaat
gataaggttggcctgaagactcttttgagctacctgtacgtctgcccaaccaacaagcgc
aaaattatgttgctgactgacccggagattgagagcagtttgctgattagctctgacgaa
ggggccacgtatcaaaagtaccgtctgaacttctacatccagagcctgctgttccatccc
aaacaggaggactggattctggcatacagtctcgatcagaagttatacagttcgattgag
tttggcagaagatggcagcttctccaggagggtgtcacaccaaacaggttctactggtct
gtgatgggttccagtaaagagccagaccttgtgcacctggagacgaagacggtggatggc
catgctcagtacatcatctgcaggatgcagaactgcaccgaagccacccggagcaaacca
tttccaggctacattgaccctgactccctgattgtgcaggacgattatgtgtttgttcag
ttaacatcgggaggacggccgcactattacgtgtcctataggagaagcgcgtttgcacag
atgaagctgccaaagtattctttgcccaaggatatgcatgttatcagcacggatgagaat
caggtgtttgcagctgttcaggagtggaaccagaatgatacttacaacctttatatatct
gacacccgaggggtctacttcacgctcgccttggagaatgtcaagagtagccgagggctg
gagggtaatgtgatgatcgatctctatgaggtagcagggataaagggaatgttcttggct
aacaagaagattgacaaccaagtgaaaactttcatcacctacaacaaaggaagagactgg
cgcttgctgcaggctccagatactgatctgagaggaaaccctgttcattgcctcctaccc
tattgttcgctgcaccttcacctaaaggtttccgagaacccgtacacttcaggaaacatc
gccagccgagatactgcccctagcatcatcgtggcttctggtaacataggtaccaaattg
tcagacaacgacatcagcatgtttgtttcatcagacgctgggaacacgtggagacagatc
tttgaagaggagcacagtgttttatacctggatcaaggtggagtcctggttgccatgaaa
cacacatctttgcctatcagacatctatggttaagtttcgatgaagggagatcctggagc
aagtacagcttcacgtccatcccactctttgtggatggggtattgggtgagcctggtgag
gagactctgatcatgacagtgtttggacacttcagccatcgctcggaatggcagctggtg
aaagtggactataagtcaatttttgacaggagatgtgcagaagaggactaccggccgtgg
cagctccatagccagggagaagcatgcattatgggagcaaaacggatctacaggaaacgc
aaatcggagaagaagtgcatgcagggaaaatacgctggggccatggcatcggaaccatgt
gtttgcacggaggcagactttgattgtgattatggatatgagcgtcacaccaatggccag
tgtctgccagcattttggtataacccatcatccttgtcaaaagactgtagctttggacag
agttatctcaacagcaccgggtacagaaaggttgtgtctaataactgcactgatggtgtg
agagaacagtacacagctaaaccccagcagtgtcctggcaaggccccccacggactgcgt
atcatcaccttggatgggaaactgacggctgaacaagggcacaacgttactttcatagtg
cagctggaggagggtgacgtccaaaggatgatcattcaggtggattttggagacggcatc
gccgtgtcctatgccaatctcagctcgacggaggatgggatcaagcacgtctaccagaat
gtgggcatattccgagtgaccgtgcaggtggaaaacagcctgggattggacagtgctgtc
ctgtacttacatgtaacttgccccctggaacatgttcatttgtctctcccgtttgttact
accaagaacaaagaggtcaatgctacggcgatactgtggcccagccaggtgggcacgctg
acttacgtttggtggttcgggaacaacaccgagccactggtcaccctggaggggagcatc
acattcacgttctctgtggaagggatgaacacgatcacggtacaggtttcggcagggaac
accatcttgcaggatacaaagactattgcagtgtatgagcgatttcaatctctccgcttg
tcgttctcgccaaacctggatgagtacaacccagatatccctgaatggagacgggacgtc
agtagagtgatcaagagagctctagtggaggcaacaagtatttcaagcaaacatatcctg
gtcgcagtcctgcctggtttgcccacatccgctgagctcttcattttaccgtgtcaagag
gccatgggagaaaacaaaagaccaccagaagacctagaccagatttcagaaatattgatc
cacaaactgaaccaaaacttggtacagtttgagttgaagcctggggttcgagtcctggtc
catgtggcccatttatcagcagttcccctggtggacctcacgcccagtcacagtggttcg
gccatgctgatgctgctatctgtggtgtttgtgggattagccgtttttgtaatttacaag
ttcaaaaggaagattccgggcattaatgtttatgcacagatgcagaatgagaaagatcaa
gagatggtcagtccagtcagtcaaagggaaagcatgcctaatatccctcaaagtgaactg
atgagccctgagcaactagtagatgagaagttggatacccggcccataggaagtatttcc
atagctgctgagactcaaagcacaaaagaaatccctacctatgtaaatgtttga
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integrated database retrieval system
