Chelonoidis abingdonii (Abingdon island giant tortoise): 116820998
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Entry
116820998 CDS
T07367
Symbol
GSDME
Name
(RefSeq) gasdermin-E isoform X1
KO
K22146
gasdermin-E
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116820998 (GSDME)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cabi02000
]
116820998 (GSDME)
Transporters [BR:
cabi02000
]
Other transporters
Pores ion channels [TC:
1
]
116820998 (GSDME)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
116820998
NCBI-ProteinID:
XP_032629742
Ensembl:
ENSCABG00000000465
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MFAKATKNFVRETDCGGDLIPVSRLNDSDKLQLLNLVTKKKKLWCWQKPKYHFLTVKLND
VLIEDKPIKPVVVESDFVKYEGKFEDFVRGSIETSFGKINLGAGGKGFVESQSSFGNLKK
QEADLQQLMKDLKGSTVFSRAPVLHGDPHEQLTAPQDFSNLPTQITITINLNNNLLQQVL
ERKHEVLCILTEKIVTTQKCLVSEHVQTEEKYGGMVGLRTKIVKVSVSENGNVRKDSNVV
LEIPAPTAIAYGVIELYIKRDGQFEFCLLDEQEGGFERENTEGSSYPYSLPIRDSSFLYQ
PDAVDSDRHSGDRNIIPSDVSLSVLKQDLLLLKMQFQPFVKLSEDKQGALNKIFYELLHH
EEMVTALEEMLDSIFTGEEPDFTDLKELKPPQQQNLTDFLQLIGYSLQNELLLQKDQLHY
KGLFSAAHILISAVAELSDYTLALLRACCDIQIIPALCCLPNVASTDGTLTLRDPALAPL
TDAGRFRIVQRLFAQSNINLEMMESSVKAVTMKEPSFFPFILYIALYGFYALGGTI
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaaaagcaacaaaaaattttgtgagagagactgactgtggcggtgacttgatc
cctgtatcccgcttgaatgactcagataaattacaacttctgaacttagtaacaaagaag
aagaaattgtggtgctggcagaaaccaaagtaccatttcttgacagtcaagctgaatgat
gtgcttattgaagacaaacctataaaaccagttgttgttgagtctgactttgtgaaatat
gaggggaagtttgaagactttgtcagaggaagtattgaaacttcatttggaaagatcaac
ctgggtgctggaggaaaaggctttgtagaaagccagtcttcatttggaaacctaaaaaag
caagaggctgatttgcagcagcttatgaaagacctcaagggaagcacagtgttctctagg
gctccagtcctgcatggtgatccacacgagcagttgacagcaccccaggacttcagcaat
ctgcccacgcagatcaccataacaataaatctaaacaataatttactgcaacaagtgcta
gaaagaaaacatgaggtgctgtgtatcttgacagaaaagatagtaacaactcaaaagtgt
ttggtatctgaacatgttcagacagaagaaaaatatggtggcatggtgggactccgtaca
aaaattgtaaaggtttcagtgagcgaaaatgggaatgtgagaaaggattccaatgtggtc
ttagagattcctgctcccaccgcgattgcctatggtgtaattgaactgtatataaagcgt
gatggtcagttcgaattctgcctgctagatgagcaagaaggaggttttgaaagagaaaac
acagaaggctcatcttatccatattctttaccgattagagattcttcctttctatatcag
ccagacgctgtggatagtgacaggcactctggagatagaaacatcattcccagtgatgtt
tccttaagtgtactgaaacaagatctgttgctgttaaagatgcagttccaaccctttgtg
aagctttcagaagacaagcaaggagctttaaataaaatattttatgagctcttgcatcat
gaagaaatggtgactgcactggaggagatgttagatagtattttcacaggagaggagccg
gattttacagacctgaaggagttgaaacctccacagcagcaaaacctaaccgacttcttg
cagctgatcgggtacagtttacagaatgagctgttgttgcagaaagaccaacttcattat
aagggactcttctcagctgctcacatcctgatcagtgcagtggcagaattatctgactac
acactggctctgctgcgtgcttgttgtgatatacaaataatccctgccttgtgttgtttg
cctaatgtcgcttcaactgatggcactttgacattgagagatcctgccctggcccctctc
actgatgcaggaagatttcgtatagtgcaaaggctgttcgcccaatcaaacattaacctc
gaaatgatggagtcttcagtgaaagctgtaaccatgaaagaacctagcttttttccattc
attctttatattgcattgtatggattttatgccttaggtgggaccatctga
DBGET
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