Chelonoidis abingdonii (Abingdon island giant tortoise): 116821015
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Entry
116821015 CDS
T07367
Symbol
NUP42
Name
(RefSeq) nucleoporin NUP42 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116821015 (NUP42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116821015 (NUP42)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116821015 (NUP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
116821015
NCBI-ProteinID:
XP_032629773
Ensembl:
ENSCABG00000000658
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MAGALGACSGCHYRSCPASWSSALTRLVSCPPQRTDGLRGALPQAWDNLRPVTVLPGCSL
PHFEVGFCHKAGSGRGGWGAHNQRYTNVVQPSNFSKPTTWGSSRDDGKAFFGPSIDSGAP
GSGNKSPGFSQNRFSALSSEQNIGSSYRDEEEKLLEGIKKDMEVWESSGQWMFSCYSPMK
EKPNISGFPDFSPEELHLEYYNCRANNNIQNYINSVQQLVNQWRSRLLVLKTLNTSTKAA
LVSELKNVVSQPLPAFGFGGQQTSTFGSSGFPLSSSSNRSASSSSFKSNTELVSPSSGST
TPFGSSSMVPDPSALGVTSSARSAPSTGFGSQPASSAASFSFKKPETAGGFGASGFSGFG
SSSAVNLSSTTSLPAFGAVNAAVAAPASEPGNSLFGRSVNAFGYNVAPAPPAATSIVTSD
KLFTPKNDLSPEELKQFEAKKFTLGKIPLKPPPIELLNV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctggggccctgggcgcttgcagtggatgtcattaccgcagctgccctgctagctgg
agctctgctctgacccgtctagtatcctgcccgccacagcggacggacggcttgcgagga
gccctgccgcaggcctgggataacctgcgcccagtgacggttcttcctggctgctctctc
ccccatttcgaggttggcttctgccataaagcgggttctggcagaggaggatggggtgcc
cataaccagagatacaccaatgttgtccagccttctaacttttctaaacccactacatgg
ggtagcagcagagatgatggaaaggcattttttggaccctctattgactctggagcacca
ggcagtggcaataaaagtccaggattttctcaaaacagattctctgcgttaagctctgag
caaaatattggcagtagctacagagatgaagaggagaagcttcttgaaggcataaaaaag
gacatggaagtctgggaatcttcaggacagtggatgttctcctgttactcacctatgaaa
gaaaagcctaacatctcaggttttccagacttctcaccagaagagttgcatcttgaatac
tataactgcagagcaaacaataatattcagaactatataaattcagtccagcaattagta
aaccaatggagaagtagattgcttgtgttgaagactctgaatacatctaccaaagctgca
ctggtatctgaactgaaaaatgtggttagtcaaccattgcctgcctttggatttggtgga
caacaaacatcaacctttgggtcatcaggctttccactaagcagtagcagcaataggagt
gccagcagttcctcctttaaatcaaatactgaacttgtcagtccatcctctggaagcacc
actccatttggaagctcttctatggttccggacccttcagcattgggtgtgacatcttcc
gcaagatcagccccttccactggctttggtagccaaccagcttcatctgcagcctctttt
tcatttaaaaagcctgaaactgcgggtggttttggagcttctggattttcagggtttggc
agttcgtctgctgtaaacttgtcaagcacaacttcgcttccagcctttggagctgttaat
gcagcagttgctgcccctgcctcagaaccaggtaactctttatttggacggtccgttaat
gcctttggatataatgtagcaccagcacctcctgcagccacaagcattgttacctcagat
aagttattcacaccgaagaatgatctatcacctgaagagttgaagcagtttgaagcaaag
aagtttactctaggaaaaattcctctaaagccaccaccaatagaacttttaaatgtttga
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