Chelonoidis abingdonii (Abingdon island giant tortoise): 116821273
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Entry
116821273 CDS
T07367
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cabi03041
]
116821273 (DHX35)
Enzymes [BR:
cabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116821273 (DHX35)
Spliceosome [BR:
cabi03041
]
Complex C
Other components
Complex C specific factors
116821273 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
DEAD
ABC_tran
AAA_19
AAA_7
nSTAND3
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116821273
NCBI-ProteinID:
XP_032630229
Ensembl:
ENSCABG00000011353
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MAAPVGPMKFWKPGTEGPGVSITEERQSAAESTGVSVIYNPYASLSIEQQRQKLPVFKLR
NHILYLVENYQTLVIVGETGCGKTTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRV
AEERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHE
RTLYTDIAIGLLKKIQKKRGDLRVIVASATLDAEKFRDFFNQNETNDPSKDTSMILTVEG
RTFPVDIFYIQSPVPDYVKSTVETVMKIHQTESDGDILAFLTGQEEVEAIVSMLIEQARV
LSRSGMKKHLRVLPMYAGLPSSEQMKVFERVSHSVRKVIVATNIAETSITINGIAFVIDC
GFVKLRAYNPKTAVECLVVVPVSKASANQRVGRAGRNRSGKCYRLYTEEDFEKLPQSTVP
EMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDKHCRLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFMFPPNQKAQAIRKHRKFAV
EEGDHLTMLNVYEAFIKHSKSSQWCQEHFLNYKGLVRATTVREQLKKLLVKFKVPKKSSE
GDPDPVLRCIVSGFFANAAKCHSTGAYRTIRDDQELHIHPTSVLYAEKPPRWVVYNEVIQ
TSRYYMRDVTAIESTWLLELAPHFYQEGTVRTRHRHQMHLSLKAKRVKVDDH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtgggaccgatgaaattttggaaaccgggcacggaaggtcctggtgtc
agtatcacagaagagaggcagagtgctgctgaaagtactggtgtttctgtcatctataat
ccttatgcatctctttcaattgaacaacagagacaaaagttaccagtgtttaagcttaga
aaccacatcctttatctggtggagaactatcagacactggtgattgttggagaaacagga
tgtggaaaaactactcagattccacaatatctagcagaagctggctggacagccgaaggg
agagtagtgggagtgacgcagcctcgcagggttgctgctgtttcagttgcaggccgagtg
gctgaagaaaggggcgcagtgctgggtcatgaagttggatattgtattcgatttgatgac
tgcacggacccacaggctacaagaattaagtttctgaccgatgggatgctggtgagggag
atgatggctgacccactattaacgagatacagtgtcctcatgctggatgaagcccatgaa
agaaccctgtatacagacattgccatcggtttgttaaaaaagattcagaagaaacgaggg
gatcttcgagtgatcgtagcatcagccacactagatgcagagaaatttagagatttcttc
aatcaaaatgagaccaacgaccccagtaaggataccagcatgatccttaccgtggaaggg
agaacatttccggtggacattttttacatacagagccctgttccagattatgtcaaatca
actgtggaaactgtgatgaaaattcaccagacagagagtgacggagatatattggcattt
ctaactggccaggaggaggtggaggccatagtttctatgctaatagaacaggctcgagtc
ctttctcgctctgggatgaagaaacaccttcgagttcttcccatgtatgctgggctgcct
tcctcggagcagatgaaagtgtttgagagagtttcacacagtgtcagaaaggtgatagtg
gccaccaacattgctgagacatctatcacaattaatgggattgcatttgtgattgactgt
ggctttgtgaagcttcgggcctataatccaaaaacagcagtcgaatgccttgtggttgtc
ccggtatctaaggcatcagctaatcagagagtaggtcgtgcaggccggaaccgttctgga
aaatgttatagactttacacagaagaagactttgagaagttgcctcaatctaccgttcct
gagatgcagcgcagtaacctggcccctgttatcctgcagctgaaagctctggggatagac
aatgtgctcaggttccccttcctgtctccgccccctgcgcagtctatggtgcaagcatta
gagctgctgtatgctttaggaggtctggataaacattgtcgcctaacagaacctcttggt
atgagaatagcagagttccctttgaaccctatgtttgcaaagatgctgttggaatcagga
aactttggctgctcccaagagatcttgagcattgctgccatgatgcagattcagaacatc
tttatgttccctccaaaccaaaaggctcaggctatcaggaaacacagaaaatttgctgtg
gaagagggagatcatctcactatgcttaatgtttatgaagcttttattaaacacagcaag
agttctcagtggtgtcaggaacactttctaaactacaaagggcttgtcagagcaaccact
gtaagggagcagctgaaaaagcttcttgtcaaatttaaagtgccaaagaaatccagtgaa
ggtgatccagatcctgttctgaggtgtatagtttctggattctttgctaatgcagctaaa
tgccactccactggagcttacaggactatccgtgatgaccaggaactgcacatccatccc
acctcagtgctgtatgcagagaaacctcctcgctgggtagtctacaatgaagtcatacag
acctccaggtactacatgagagatgtgactgctattgaatccacttggctattggaactg
gcacctcacttttaccaagaaggaacggtacggactcgacatagacaccaaatgcatctt
tccttgaaagcaaagagagttaaagtagatgaccactga
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