Chelonoidis abingdonii (Abingdon island giant tortoise): 116821313
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Entry
116821313 CDS
T07367
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116821313 (BRF1)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
116821313 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
116821313
NCBI-ProteinID:
XP_032630277
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MPGGRVCAVCGGSEIEVDAARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVS
LDGAGKTPSLGGGFHVNLGTESRAQTLQNGKRQINHLGNQLQLNQHCLDTAFNFFKMAVS
KHLTRGRKMTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAP
AIDPCLYIPRFAHMLEFGDRNQKVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARM
HDFRRTVKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIEEFMKIDLEEECDPPSFTAGQR
KLKIQELEKALSKKLEDVEGEISIYQDEIENELENSRPKAKGVFANLTKDESIEDNTASV
CGEEEAEDEELEAAANHLNKDFCNELLDKDRLKKIERRECKNGNETPVWPPALESLLGPL
PTTASLGITDSIQECVSTKDRDHNLKVLSRDENTGDGELDLSGIDDTEIDRYILDETEAQ
IKAELWMKENADYLKEQKEKEARIAKEKELGIYKEHKPKKSAKKREPIQASTAGEAIEKM
LEQKKISSKINYNVLKDLNSKGSNTPKKEDDSTDDSSNTKKLSRRKSTASRNIANTVNSM
GKRLRPLISTQLAKKAATEEVTFPESQTEGPELEKPENVLVESGPVSYNHDEEVEEEEIE
EEDDHCMSALQLMGGNDYGCDMDDDDGY
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgccgggggggcgcgtgtgcgccgtgtgcggcggctcggagatcgaggtggacgcggcg
cggggggacgcggtgtgtacgggctgcggctcggtgctcgaggacaacatcatcgtctcc
gaggtgcagttcgtggagaacagcggcggcggctcctcggccgtggggcagttcgtgtct
ttggacggtgccggtaaaacaccatcattaggaggaggattccatgtcaatttgggaacg
gaatcgcgagcacagacgctccagaatgggaaacgtcaaattaatcacttgggaaaccag
ttgcaactcaaccagcattgtcttgatactgcttttaactttttcaagatggcggtgagc
aagcacttaacccgtgggagaaagatgactcatgtaattgctgcatgtctctacttggtg
tgtagaacagaaggaacgcctcacatgttacttgacctcagtgaccttcttcaggtgaat
gtctatgtcctgggaaaaacattccttctgctggccagagagctctgcataaatgctcca
gctatagatccatgtttatatattcctcgttttgcacacatgctagaatttggagatagg
aaccagaaggtatcaatgacagctctaagattattacagaggatgaaaagagactggatg
cacacaggacgccggccatcggggctctgtggagcagctcttctagtggcagcaagaatg
catgatttccgacgtactgttaaagaggttatcagagtggtcaaggtttgtgagtcaacg
ttaaggaaaaggcttacagaatttgaagatacaccaacaagtcagctaacgatagaagaa
tttatgaagattgacttggaagaggagtgtgatcctccttcatttactgctggtcaaaga
aaattaaagatacaggagcttgagaaagcgctgtcaaaaaagcttgaagatgttgaaggt
gaaatatcaatttaccaagatgaaatagagaatgaattagaaaatagtagaccaaaggca
aaaggagtatttgccaatttgactaaagatgaatctatagaagataatacggctagtgta
tgtggagaggaggaggcagaagatgaagaactggaagcagctgctaatcatttaaacaag
gacttttgtaatgaacttctagataaagataggttaaagaaaatagaaaggagagaatgc
aaaaatggaaatgaaactcctgtatggccacctgcactagaatctctgcttggcccactc
cccactactgccagccttgggataacagattctatacaagagtgtgtatccactaaggat
cgagaccacaatctcaaagtgctttccagagatgaaaatacaggcgatggtgaattagat
cttagtggaattgacgacactgaaatagataggtatatacttgatgaaacagaagctcaa
ataaaagcagaactgtggatgaaagaaaatgcggattatttgaaggaacaaaaggagaaa
gaagcgagaatagcaaaagagaaggagcttgggatttataaggaacacaagccaaagaag
tcagcaaaaaagcgggagccaattcaagctagcacagcaggagaagcaattgaaaagatg
ttggaacagaagaaaatctcaagtaaaattaattataatgtgctaaaggacctgaacagc
aaaggaagtaacacaccaaagaaagaggatgacagcaccgatgacagcagcaacaccaag
aagctgtcaagaagaaaatctactgccagtaggaatatagccaacactgtaaacagtatg
ggaaaaagattaagacccttgatttctacacaactagctaaaaaggctgcaactgaagag
gtaacctttccagagtcgcagacagaagggccagagcttgaaaaaccagagaacgttctg
gtagagagtggaccggtgtcatataaccatgatgaagaagttgaagaagaagaaatagaa
gaggaggatgatcactgcatgagtgcacttcagttaatgggaggaaatgattacggctgt
gatatggacgatgacgacggttattag
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